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The map label for this gene is X [H]

Identifier: 153937175

GI number: 153937175

Start: 499969

End: 500289

Strand: Reverse

Name: X [H]

Synonym: CLC_0496

Alternate gene names: 153937175

Gene position: 500289-499969 (Counterclockwise)

Preceding gene: 153935254

Following gene: 153935316

Centisome position: 13.3

GC content: 28.35

Gene sequence:

>321_bases
ATGGATAAAGAAATCATGAAAGGTAGCATTGATATACTTATCCTCACTTTGATAAATAAGGATGACTTGTATGGCTACAA
AATCTCGAAAATTATTAAAAAAAAAAGTAACATGACCTATTCTATGGGAGAGGGCACCTTGTATCCTGCTCTAAAAAGAT
TGGAATCAAAAAAATTAATTAAGTCATATTGGAAAGATAATGATTTATCCGGTAAACGAAAATATTATTCAATTACACCC
TTAGGTAAAAGTGTACTAAAAGAAAAATTAGCTCAATGGGATAATATAACTAAATTAATAACTATTTGTATGGAGGATTG
A

Upstream 100 bases:

>100_bases
ATTATTTGCTATTAATTTAACAATATTTCATTACTTGACATAAAATATAATTTATGGTAATATAACTTAAAAATAGTAGT
AATGCGAGGTATTATAAATT

Downstream 100 bases:

>100_bases
ATTAATCATGTTAGAGTTTGAACAATTTATAGAAGATATAATTGATAAAAGAGGTATAAACGAAAATGATAAACTTGAAT
TAAAATATGAAATAAGCTCT

Product: PadR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MDKEIMKGSIDILILTLINKDDLYGYKISKIIKKKSNMTYSMGEGTLYPALKRLESKKLIKSYWKDNDLSGKRKYYSITP
LGKSVLKEKLAQWDNITKLITICMED

Sequences:

>Translated_106_residues
MDKEIMKGSIDILILTLINKDDLYGYKISKIIKKKSNMTYSMGEGTLYPALKRLESKKLIKSYWKDNDLSGKRKYYSITP
LGKSVLKEKLAQWDNITKLITICMED
>Mature_106_residues
MDKEIMKGSIDILILTLINKDDLYGYKISKIIKKKSNMTYSMGEGTLYPALKRLESKKLIKSYWKDNDLSGKRKYYSITP
LGKSVLKEKLAQWDNITKLITICMED

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 12301; Mature: 12301

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKEIMKGSIDILILTLINKDDLYGYKISKIIKKKSNMTYSMGEGTLYPALKRLESKKLI
CCCHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHH
KSYWKDNDLSGKRKYYSITPLGKSVLKEKLAQWDNITKLITICMED
HHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHEEECC
>Mature Secondary Structure
MDKEIMKGSIDILILTLINKDDLYGYKISKIIKKKSNMTYSMGEGTLYPALKRLESKKLI
CCCHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHH
KSYWKDNDLSGKRKYYSITPLGKSVLKEKLAQWDNITKLITICMED
HHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA