| Definition | Clostridium botulinum A str. Hall, complete genome. |
|---|---|
| Accession | NC_009698 |
| Length | 3,760,560 |
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The map label for this gene is 153937014
Identifier: 153937014
GI number: 153937014
Start: 2599954
End: 2601177
Strand: Direct
Name: 153937014
Synonym: CLC_2474
Alternate gene names: NA
Gene position: 2599954-2601177 (Clockwise)
Preceding gene: 153934500
Following gene: 153934956
Centisome position: 69.14
GC content: 29.17
Gene sequence:
>1224_bases ATGAATAACTTAAATTTATTTTATTATATTGTAGAAAATAATATTATGATTTCAACAGAGAAAGAGGATTTAAAAGAAAT AACAGAAAAGGAAGCCTCTGATTATAAGGGATTAATGTACTTTTTAATAAATATAGTTCAAAAAAATTCTAGAAGAAGCT TTTTGATAACTAATAGCTCCATGCTTTTTATAAAAAATGAAAATTTGAATATTTTAATAGAAAGAGATTCTCCTATTAAA ATTCCACAATTTATAAGAAAAGCTATAAAAGAAAAAAGATTAGTAGCTATTAATAAAGCTTATGAAAATTGGAAGGAAAC ATTAAAATTTAATCCTTGTCCAACCCGAAAATGGAAGATAAATATAGTAGGATTAGGTGATGTAGGAGGAACATTAATTA CAGGATTAAGACTTTTAGGGAAGGATTGCATAGATGAAATAGGTATATATGACAAAGATGTAAATAAAATAAACCGATGG GAATATGAATGTAATCAAATTCAAAGTCCTGACTTAAATCCAAACTTGCCCCGAATAAAAGCATTAAATGAAGATGAAAT CTTTAATTGTAATATGTTTGTATTCTGTGTTTCTGTGGGTGTCCCTAAAATAGGAGATGAAATTAAAGATGTAAGACTAG TTCAATTTGAAGGAAACAGTAAAGTAGTATCTTTTTATGCCAAACTTGCAAAAGAAAAAAATTTTAAGGGTATATTTGCC ATAGTATCCGACCCGGTAGATCTTCTATGCAAATCAGCCCTAAAGGAAGGTTTAGCTCCCGAACAAGTAAGAGGCTATGG TCTTGGAGTTATGAGCGCTAGAGCTGCCTATTACGCAGATAAAGATCCTAAATTCAAAAATTATTCTATGGAAGGAAGAG CTTTTGGACCCCATGGAGAAGGTCTTGTAATAGCTAATAGTATAGATAATTACGATGAAAATTTATCTGATATTTTAACT AAAAAAACTAGAGAAGCAAATTTAGAAATACGCTCCTTTGGCTTTAAACCCTATATAGCTCCTGCTCTGTCCTCTGGAAG TTTTTCTTTAATAGCTACTATAAAATCAGAGTGGCACTATAGTGCTACATTTTTAGATGGTGCTTTTATGGGAATTAAAA ATAGATTTATAAACAATACTATAGAGTTAGAAACCTATAAAAATATGCCCCCTAACTTACTAAAAAAATTAGAAGAAACC CATATTTATCTAAAGAATTTTTAA
Upstream 100 bases:
>100_bases TTAGAAAATATTATGGAAGACTAAAAATTAATCTAATATAAATAATTAAATAATATTTTATGTATAACTATTATGACAAT AATATATAGGATGTGAATTT
Downstream 100 bases:
>100_bases CATTTTTGAAAAGTAGTATAACAATTCATATAAACTTTTTAGCTTAAATATAAATTTTTTCTAAAAATTGTTTAAAGACG CATTTATCATTATTTAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Malate/Lactate Dehydrogenase
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MNNLNLFYYIVENNIMISTEKEDLKEITEKEASDYKGLMYFLINIVQKNSRRSFLITNSSMLFIKNENLNILIERDSPIK IPQFIRKAIKEKRLVAINKAYENWKETLKFNPCPTRKWKINIVGLGDVGGTLITGLRLLGKDCIDEIGIYDKDVNKINRW EYECNQIQSPDLNPNLPRIKALNEDEIFNCNMFVFCVSVGVPKIGDEIKDVRLVQFEGNSKVVSFYAKLAKEKNFKGIFA IVSDPVDLLCKSALKEGLAPEQVRGYGLGVMSARAAYYADKDPKFKNYSMEGRAFGPHGEGLVIANSIDNYDENLSDILT KKTREANLEIRSFGFKPYIAPALSSGSFSLIATIKSEWHYSATFLDGAFMGIKNRFINNTIELETYKNMPPNLLKKLEET HIYLKNF
Sequences:
>Translated_407_residues MNNLNLFYYIVENNIMISTEKEDLKEITEKEASDYKGLMYFLINIVQKNSRRSFLITNSSMLFIKNENLNILIERDSPIK IPQFIRKAIKEKRLVAINKAYENWKETLKFNPCPTRKWKINIVGLGDVGGTLITGLRLLGKDCIDEIGIYDKDVNKINRW EYECNQIQSPDLNPNLPRIKALNEDEIFNCNMFVFCVSVGVPKIGDEIKDVRLVQFEGNSKVVSFYAKLAKEKNFKGIFA IVSDPVDLLCKSALKEGLAPEQVRGYGLGVMSARAAYYADKDPKFKNYSMEGRAFGPHGEGLVIANSIDNYDENLSDILT KKTREANLEIRSFGFKPYIAPALSSGSFSLIATIKSEWHYSATFLDGAFMGIKNRFINNTIELETYKNMPPNLLKKLEET HIYLKNF >Mature_407_residues MNNLNLFYYIVENNIMISTEKEDLKEITEKEASDYKGLMYFLINIVQKNSRRSFLITNSSMLFIKNENLNILIERDSPIK IPQFIRKAIKEKRLVAINKAYENWKETLKFNPCPTRKWKINIVGLGDVGGTLITGLRLLGKDCIDEIGIYDKDVNKINRW EYECNQIQSPDLNPNLPRIKALNEDEIFNCNMFVFCVSVGVPKIGDEIKDVRLVQFEGNSKVVSFYAKLAKEKNFKGIFA IVSDPVDLLCKSALKEGLAPEQVRGYGLGVMSARAAYYADKDPKFKNYSMEGRAFGPHGEGLVIANSIDNYDENLSDILT KKTREANLEIRSFGFKPYIAPALSSGSFSLIATIKSEWHYSATFLDGAFMGIKNRFINNTIELETYKNMPPNLLKKLEET HIYLKNF
Specific function: Unknown
COG id: COG0039
COG function: function code C; Malate/lactate dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46495; Mature: 46495
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNLNLFYYIVENNIMISTEKEDLKEITEKEASDYKGLMYFLINIVQKNSRRSFLITNSS CCCCEEEEEEEECCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCE MLFIKNENLNILIERDSPIKIPQFIRKAIKEKRLVAINKAYENWKETLKFNPCPTRKWKI EEEEECCCEEEEEECCCCCCHHHHHHHHHHHCCEEEEHHHHHHHHHHEECCCCCCCEEEE NIVGLGDVGGTLITGLRLLGKDCIDEIGIYDKDVNKINRWEYECNQIQSPDLNPNLPRIK EEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCCEE ALNEDEIFNCNMFVFCVSVGVPKIGDEIKDVRLVQFEGNSKVVSFYAKLAKEKNFKGIFA ECCCCCEEECCEEEEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCEEEE IVSDPVDLLCKSALKEGLAPEQVRGYGLGVMSARAAYYADKDPKFKNYSMEGRAFGPHGE EECCCHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEECCCCC GLVIANSIDNYDENLSDILTKKTREANLEIRSFGFKPYIAPALSSGSFSLIATIKSEWHY CEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEEEECCCEE SATFLDGAFMGIKNRFINNTIELETYKNMPPNLLKKLEETHIYLKNF EEEECCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHEEEEECC >Mature Secondary Structure MNNLNLFYYIVENNIMISTEKEDLKEITEKEASDYKGLMYFLINIVQKNSRRSFLITNSS CCCCEEEEEEEECCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCE MLFIKNENLNILIERDSPIKIPQFIRKAIKEKRLVAINKAYENWKETLKFNPCPTRKWKI EEEEECCCEEEEEECCCCCCHHHHHHHHHHHCCEEEEHHHHHHHHHHEECCCCCCCEEEE NIVGLGDVGGTLITGLRLLGKDCIDEIGIYDKDVNKINRWEYECNQIQSPDLNPNLPRIK EEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCCEE ALNEDEIFNCNMFVFCVSVGVPKIGDEIKDVRLVQFEGNSKVVSFYAKLAKEKNFKGIFA ECCCCCEEECCEEEEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCEEEE IVSDPVDLLCKSALKEGLAPEQVRGYGLGVMSARAAYYADKDPKFKNYSMEGRAFGPHGE EECCCHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEECCCCC GLVIANSIDNYDENLSDILTKKTREANLEIRSFGFKPYIAPALSSGSFSLIATIKSEWHY CEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEEEECCCEE SATFLDGAFMGIKNRFINNTIELETYKNMPPNLLKKLEETHIYLKNF EEEECCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA