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The map label for this gene is cinA

Identifier: 153936858

GI number: 153936858

Start: 242278

End: 243507

Strand: Reverse

Name: cinA

Synonym: CLC_0267

Alternate gene names: 153936858

Gene position: 243507-242278 (Counterclockwise)

Preceding gene: 153935487

Following gene: 153935718

Centisome position: 6.48

GC content: 30.65

Gene sequence:

>1230_bases
ATGAAAGCAGAAATACTTTGTGTAGGAACAGAATTATTATTAGGGGATATTGTAAACACAAATGCCCAGTATATATCTAA
AGAGTTAGCTAATATAGGGATAGAGGTTTATCATCACTCTGTAATTGGAGATAATGAAAATAGATTATTAAAAGAACTTG
AAAGAGCCTTTAATTATTGCGATTTAGTTATAACTACTGGGGGCTTAGGACCTACCAAAGATGATCTAACTAAAGAATCC
GTAGCTAAATTTTTTCAGGAAGATTTAGTTCTACACGAAAAATCCTTAAAACAAATAGAAAAAAGGCTATTATGTTTTAA
TAAATCTATGACAGAAAGTAATAAAAAACAGGCTTATTTCCCTAAAAATTGTGAAATACTAGAAAATCCTAATGGCACTG
CTCCAGGATTTATAATAGAAAAAGATAATAAAATAGCTATAATACTGCCTGGTCCTCCTTATGAAATGCAACCTATGTTT
GAAAACAAAGTAATACCTTATTTAGAAAAACTAACAAGCTCTACCATAAAATCTAAAGTTTTAAGAATAACTGGGATAGG
AGAAAGTGATGTAGCTGATCTAATAAGTGATATTTTGGAGAACCAAACCAATCCTACAGTAGCTCCCTATGCCAAACAAG
GAGAAACTACATTAAGAATTACCGCTAAAGCTAACTCTGAAGAAAAAGCGCTAAATTTAATAGTTCCTATAGAAAAAAAG
ATAAGACAAATACTAGAAGATAATATATATGGCTCTGGTGAAACTTCATTAGAAGAAGTAGTAGCTAATATACTTGTAAA
AAGGAATCTAACTATAGCCACCGCTGAATCTTGTACTGGTGGTTTATTAGCAGGAAAACTTATAAACTTTCCTGGTATAT
CATCTGTATTTTTAGAAGGGGCTATAACTTATAGCAATGAGTCTAAAATAAATAGATTAAATGTAAAAAAAGAAACTTTA
GAAAAATATACAGCTGTAAGTAAAGAAGTTGCCCTAGAAATGGCTGAAGGTATAGCAAAATCTGCAGGTACGAATATAGG
AATTTCTACTACAGGAGTAGCAGGTCCTGGTGGTGGAACCTATGACAAACCTATAGGATTAATTTACATAGGTCTTTATA
TAAACGGAAAAACCTTTGTTAAAGAATTAAACTATTCTGGTAACAGACAATTTATAAGAAATATAACTGTAACTAGAGCA
TTAGACTTTTTAAGAAGAAACTTAAAATAA

Upstream 100 bases:

>100_bases
GCCTATTTATATAACAAGAAAGAATACAGAAAAAATTTATATAAATTTATAGATAAATATGTAAAGATTAACTAAACTAT
TTAAGGAAGGTGCTAAAATC

Downstream 100 bases:

>100_bases
GGAAGTTGCTACGCAACTTCCTTATTTTATAATTTTGATAATCCCATCTTTAAGGCTACTTTTTTTACTTCTTCTGCCAC
AACTTCTGCTACTCTTTTAT

Product: competence damage-inducible protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MKAEILCVGTELLLGDIVNTNAQYISKELANIGIEVYHHSVIGDNENRLLKELERAFNYCDLVITTGGLGPTKDDLTKES
VAKFFQEDLVLHEKSLKQIEKRLLCFNKSMTESNKKQAYFPKNCEILENPNGTAPGFIIEKDNKIAIILPGPPYEMQPMF
ENKVIPYLEKLTSSTIKSKVLRITGIGESDVADLISDILENQTNPTVAPYAKQGETTLRITAKANSEEKALNLIVPIEKK
IRQILEDNIYGSGETSLEEVVANILVKRNLTIATAESCTGGLLAGKLINFPGISSVFLEGAITYSNESKINRLNVKKETL
EKYTAVSKEVALEMAEGIAKSAGTNIGISTTGVAGPGGGTYDKPIGLIYIGLYINGKTFVKELNYSGNRQFIRNITVTRA
LDFLRRNLK

Sequences:

>Translated_409_residues
MKAEILCVGTELLLGDIVNTNAQYISKELANIGIEVYHHSVIGDNENRLLKELERAFNYCDLVITTGGLGPTKDDLTKES
VAKFFQEDLVLHEKSLKQIEKRLLCFNKSMTESNKKQAYFPKNCEILENPNGTAPGFIIEKDNKIAIILPGPPYEMQPMF
ENKVIPYLEKLTSSTIKSKVLRITGIGESDVADLISDILENQTNPTVAPYAKQGETTLRITAKANSEEKALNLIVPIEKK
IRQILEDNIYGSGETSLEEVVANILVKRNLTIATAESCTGGLLAGKLINFPGISSVFLEGAITYSNESKINRLNVKKETL
EKYTAVSKEVALEMAEGIAKSAGTNIGISTTGVAGPGGGTYDKPIGLIYIGLYINGKTFVKELNYSGNRQFIRNITVTRA
LDFLRRNLK
>Mature_409_residues
MKAEILCVGTELLLGDIVNTNAQYISKELANIGIEVYHHSVIGDNENRLLKELERAFNYCDLVITTGGLGPTKDDLTKES
VAKFFQEDLVLHEKSLKQIEKRLLCFNKSMTESNKKQAYFPKNCEILENPNGTAPGFIIEKDNKIAIILPGPPYEMQPMF
ENKVIPYLEKLTSSTIKSKVLRITGIGESDVADLISDILENQTNPTVAPYAKQGETTLRITAKANSEEKALNLIVPIEKK
IRQILEDNIYGSGETSLEEVVANILVKRNLTIATAESCTGGLLAGKLINFPGISSVFLEGAITYSNESKINRLNVKKETL
EKYTAVSKEVALEMAEGIAKSAGTNIGISTTGVAGPGGGTYDKPIGLIYIGLYINGKTFVKELNYSGNRQFIRNITVTRA
LDFLRRNLK

Specific function: Unknown

COG id: COG1058

COG function: function code R; Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family

Homologues:

Organism=Escherichia coli, GI1788583, Length=289, Percent_Identity=31.8339100346021, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI1789052, Length=153, Percent_Identity=37.2549019607843, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1787818, Length=141, Percent_Identity=31.9148936170213, Blast_Score=95, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71993966, Length=102, Percent_Identity=35.2941176470588, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71993974, Length=102, Percent_Identity=35.2941176470588, Blast_Score=67, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6323832, Length=178, Percent_Identity=28.0898876404494, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CINA_CLOB1 (A7FQM1)

Other databases:

- EMBL:   CP000726
- RefSeq:   YP_001382615.1
- ProteinModelPortal:   A7FQM1
- STRING:   A7FQM1
- GeneID:   5398064
- GenomeReviews:   CP000726_GR
- KEGG:   cba:CLB_0252
- eggNOG:   COG1058
- HOGENOM:   HBG449871
- OMA:   NPTVAPY
- ProtClustDB:   PRK00549
- BioCyc:   CBOT441770:CLB_0252-MONOMER
- HAMAP:   MF_00226_B
- InterPro:   IPR008136
- InterPro:   IPR008135
- InterPro:   IPR020817
- InterPro:   IPR001453
- Gene3D:   G3DSA:3.40.980.10
- PIRSF:   PIRSF006728
- SMART:   SM00852
- TIGRFAMs:   TIGR00199
- TIGRFAMs:   TIGR00200
- TIGRFAMs:   TIGR00177

Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth; SSF53218 MoCF_biosynth

EC number: NA

Molecular weight: Translated: 44999; Mature: 44999

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAEILCVGTELLLGDIVNTNAQYISKELANIGIEVYHHSVIGDNENRLLKELERAFNYC
CCCEEEEECHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCE
DLVITTGGLGPTKDDLTKESVAKFFQEDLVLHEKSLKQIEKRLLCFNKSMTESNKKQAYF
EEEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PKNCEILENPNGTAPGFIIEKDNKIAIILPGPPYEMQPMFENKVIPYLEKLTSSTIKSKV
CCCCEEEECCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHE
LRITGIGESDVADLISDILENQTNPTVAPYAKQGETTLRITAKANSEEKALNLIVPIEKK
EEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECHHHH
IRQILEDNIYGSGETSLEEVVANILVKRNLTIATAESCTGGLLAGKLINFPGISSVFLEG
HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHCCCCCHHHHHHHC
AITYSNESKINRLNVKKETLEKYTAVSKEVALEMAEGIAKSAGTNIGISTTGVAGPGGGT
EEEECCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCC
YDKPIGLIYIGLYINGKTFVKELNYSGNRQFIRNITVTRALDFLRRNLK
CCCCCEEEEEEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKAEILCVGTELLLGDIVNTNAQYISKELANIGIEVYHHSVIGDNENRLLKELERAFNYC
CCCEEEEECHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCE
DLVITTGGLGPTKDDLTKESVAKFFQEDLVLHEKSLKQIEKRLLCFNKSMTESNKKQAYF
EEEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PKNCEILENPNGTAPGFIIEKDNKIAIILPGPPYEMQPMFENKVIPYLEKLTSSTIKSKV
CCCCEEEECCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHE
LRITGIGESDVADLISDILENQTNPTVAPYAKQGETTLRITAKANSEEKALNLIVPIEKK
EEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECHHHH
IRQILEDNIYGSGETSLEEVVANILVKRNLTIATAESCTGGLLAGKLINFPGISSVFLEG
HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHCCCCCHHHHHHHC
AITYSNESKINRLNVKKETLEKYTAVSKEVALEMAEGIAKSAGTNIGISTTGVAGPGGGT
EEEECCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCC
YDKPIGLIYIGLYINGKTFVKELNYSGNRQFIRNITVTRALDFLRRNLK
CCCCCEEEEEEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA