Click here to switch to the map view.

The map label for this gene is 153936744

Identifier: 153936744

GI number: 153936744

Start: 1445912

End: 1446454

Strand: Direct

Name: 153936744

Synonym: CLC_1388

Alternate gene names: NA

Gene position: 1445912-1446454 (Clockwise)

Preceding gene: 153935464

Following gene: 153935230

Centisome position: 38.45

GC content: 27.44

Gene sequence:

>543_bases
ATGCCGTCAACGGATACTGAATTTCAAGAACAGATGCAACAACAAATGAAACAAAGGCTTGAAAACTTACCTAGATTTAC
TTATAAGGTTACAAGATTTTTTAAAAATAAAAGTGATTTACAGCAAGCTATTGATGATTTAAATAATGGAGGTATTCCTA
ATCTTAGTAGCAAGAAACTTACGGATAATTATATAGAGGAAATATATGAAATGTGTTTCTTGTTTAAAGTAGAAGGAAGA
AAAATTTTAAAAGGGTTTATATATGGAGCTTTAATAGGTATAATTTTAGGAATATTGCAGGGAATTGGATTTTTGGCCTT
TCCTATTTTAAATCCTATTTCAGCTGGAGGAATGATAGTTTCAACATTAATAATCTCACTGATTATATCTGTAATATGTG
GAGGTTTTACAGCTATAGTTTTACTTTTTAGACCTATAAAGAAAGTAGATTCATCCTTTTACATGCTTACGGTTTATTCA
GATTATGAAAATAAACAAAATATAGAGGACACATTAAATAAACATATAAATTTTGAAATATAA

Upstream 100 bases:

>100_bases
ATAATAATCATGGATGGATAATAGGAAATAGTGATTATATTAGTGATATGAATCAAGATAAAATTGATAGTCTTTTAGAA
AGTGAAAGGAGTAATAGATA

Downstream 100 bases:

>100_bases
ATTTGCTATTAATATTTAATTAAGAATTATATAAGCATAACTAATTTTTGTACCTCCAATTATTATTTAATATTAATGAT
TAAATATAATAAAACACTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MPSTDTEFQEQMQQQMKQRLENLPRFTYKVTRFFKNKSDLQQAIDDLNNGGIPNLSSKKLTDNYIEEIYEMCFLFKVEGR
KILKGFIYGALIGIILGILQGIGFLAFPILNPISAGGMIVSTLIISLIISVICGGFTAIVLLFRPIKKVDSSFYMLTVYS
DYENKQNIEDTLNKHINFEI

Sequences:

>Translated_180_residues
MPSTDTEFQEQMQQQMKQRLENLPRFTYKVTRFFKNKSDLQQAIDDLNNGGIPNLSSKKLTDNYIEEIYEMCFLFKVEGR
KILKGFIYGALIGIILGILQGIGFLAFPILNPISAGGMIVSTLIISLIISVICGGFTAIVLLFRPIKKVDSSFYMLTVYS
DYENKQNIEDTLNKHINFEI
>Mature_179_residues
PSTDTEFQEQMQQQMKQRLENLPRFTYKVTRFFKNKSDLQQAIDDLNNGGIPNLSSKKLTDNYIEEIYEMCFLFKVEGRK
ILKGFIYGALIGIILGILQGIGFLAFPILNPISAGGMIVSTLIISLIISVICGGFTAIVLLFRPIKKVDSSFYMLTVYSD
YENKQNIEDTLNKHINFEI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20507; Mature: 20376

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSTDTEFQEQMQQQMKQRLENLPRFTYKVTRFFKNKSDLQQAIDDLNNGGIPNLSSKKL
CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHH
TDNYIEEIYEMCFLFKVEGRKILKGFIYGALIGIILGILQGIGFLAFPILNPISAGGMIV
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
STLIISLIISVICGGFTAIVLLFRPIKKVDSSFYMLTVYSDYENKQNIEDTLNKHINFEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure 
PSTDTEFQEQMQQQMKQRLENLPRFTYKVTRFFKNKSDLQQAIDDLNNGGIPNLSSKKL
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHH
TDNYIEEIYEMCFLFKVEGRKILKGFIYGALIGIILGILQGIGFLAFPILNPISAGGMIV
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
STLIISLIISVICGGFTAIVLLFRPIKKVDSSFYMLTVYSDYENKQNIEDTLNKHINFEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA