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The map label for this gene is selD [H]

Identifier: 153936687

GI number: 153936687

Start: 3041872

End: 3042951

Strand: Reverse

Name: selD [H]

Synonym: CLC_2874

Alternate gene names: 153936687

Gene position: 3042951-3041872 (Counterclockwise)

Preceding gene: 153934900

Following gene: 153937652

Centisome position: 80.92

GC content: 31.57

Gene sequence:

>1080_bases
ATGTCAAATAATATAAATATTAAAGAAGGAGAAGCCTGTTCTATAGAGAAAAAAGAAGTAAGACTTACAGAGCTTTCAAG
AACATCAGGATGAGCGGCTAAGATAGCACCGGGAGTGCTCTCAAAAATACTTTCAAAATTACCTAAAATGGAAAGTGAAA
ATTTAATAGTAGGAATAGAAACTGCAGATGATGCAGCAGTATATAAAATAAATGATGATACAGCTATGATACAGACATTA
GATTTTTTTACACCTATAGTAGATGATCCATATATGTTCGGCCAAATAGCTGCAGCTAACTCTTTAAGCGATGTATATGC
TATGGGAGGTAAGCCAGTAGTAGCATTGAATATAGTTTGTTTTCCTTCATGTTTGCCTATAGAAGTTTTAGGCGAGATAT
TAAAAGGTGGAGCAGATAAGGTTATGGAATCAGGGGCTGTAGTAATAGGAGGACATACTGTTGATGATAACGAGCCTAAA
TATGGTTTGTCAGTAACAGGTATTGTACATCCAGATAAAGTTTTAAAAAATTATGGATGTAAAGAGGGCGAAGTTTTAAT
TACTACAAAACCTTTAGGGATAGGTATTATAAACACTGCTATAAAAGGAGATATGGCATCTAAAGAAGCAAAAGATGCAG
CAGTAAAATCTATGAGTACTTTAAATAAATATGCAGGGGAAATAATAACTAAATATAATATAAGTGCTTGTACGGATATT
ACTGGATTTGGTTTTCTAGGACATGCGTATGAGATGGCTAGTGCATCAAATGTTACTTTAAAATTTAACTATAAGAGAAT
ATCTTATATAAAAGAAGCAGAGGAATATGCTGAATTTGGATTAGTTCCAGCAGGAGCTTACGCTAATAGAGATCATATCG
AAGGAAATTTTGAGTTTAAAAATGTTCCTGTATTTATGCAAGATATATTATTTGATCCTCAAACTTCAGGTGGATTATTA
ATTTCTTGTTCAAAAGAAGAGTCAGAAAAAATTATGAAAGAATTAAATAAATTGGAGTTAAAATCTTCTATTGTAGGAGA
AGTTATAAGGAAACAAGATAAATATATAATAGTTGAATAA

Upstream 100 bases:

>100_bases
TTTATATTTCTTTTAAATTTTTACAAAATAATATATAATGAGTATTGAATAATTTATTATTTTTAATGTAGTTTGGTTTT
TATAAAGAGAGGTGCTTAAA

Downstream 100 bases:

>100_bases
AATATTATACTATTTATGACAATAAGTATTGAATATACAACATAATTAAGGAATGGAGAAAAGGGCATGGATAAAAAACA
ATTATTACGTAATTTACCTA

Product: selenide, water dikinase, selenocysteine-containing

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MSNNINIKEGEACSIEKKEVRLTELSRTSGUAAKIAPGVLSKILSKLPKMESENLIVGIETADDAAVYKINDDTAMIQTL
DFFTPIVDDPYMFGQIAAANSLSDVYAMGGKPVVALNIVCFPSCLPIEVLGEILKGGADKVMESGAVVIGGHTVDDNEPK
YGLSVTGIVHPDKVLKNYGCKEGEVLITTKPLGIGIINTAIKGDMASKEAKDAAVKSMSTLNKYAGEIITKYNISACTDI
TGFGFLGHAYEMASASNVTLKFNYKRISYIKEAEEYAEFGLVPAGAYANRDHIEGNFEFKNVPVFMQDILFDPQTSGGLL
ISCSKEESEKIMKELNKLELKSSIVGEVIRKQDKYIIVE

Sequences:

>Translated_359_residues
MSNNINIKEGEACSIEKKEVRLTELSRTSG*AAKIAPGVLSKILSKLPKMESENLIVGIETADDAAVYKINDDTAMIQTL
DFFTPIVDDPYMFGQIAAANSLSDVYAMGGKPVVALNIVCFPSCLPIEVLGEILKGGADKVMESGAVVIGGHTVDDNEPK
YGLSVTGIVHPDKVLKNYGCKEGEVLITTKPLGIGIINTAIKGDMASKEAKDAAVKSMSTLNKYAGEIITKYNISACTDI
TGFGFLGHAYEMASASNVTLKFNYKRISYIKEAEEYAEFGLVPAGAYANRDHIEGNFEFKNVPVFMQDILFDPQTSGGLL
ISCSKEESEKIMKELNKLELKSSIVGEVIRKQDKYIIVE
>Mature_358_residues
SNNINIKEGEACSIEKKEVRLTELSRTSG*AAKIAPGVLSKILSKLPKMESENLIVGIETADDAAVYKINDDTAMIQTLD
FFTPIVDDPYMFGQIAAANSLSDVYAMGGKPVVALNIVCFPSCLPIEVLGEILKGGADKVMESGAVVIGGHTVDDNEPKY
GLSVTGIVHPDKVLKNYGCKEGEVLITTKPLGIGIINTAIKGDMASKEAKDAAVKSMSTLNKYAGEIITKYNISACTDIT
GFGFLGHAYEMASASNVTLKFNYKRISYIKEAEEYAEFGLVPAGAYANRDHIEGNFEFKNVPVFMQDILFDPQTSGGLLI
SCSKEESEKIMKELNKLELKSSIVGEVIRKQDKYIIVE

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797148, Length=356, Percent_Identity=27.8089887640449, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI15011844, Length=297, Percent_Identity=30.3030303030303, Blast_Score=105, Evalue=5e-23,
Organism=Escherichia coli, GI1788062, Length=350, Percent_Identity=38.2857142857143, Blast_Score=239, Evalue=3e-64,
Organism=Caenorhabditis elegans, GI17543426, Length=353, Percent_Identity=28.0453257790368, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24653602, Length=364, Percent_Identity=29.3956043956044, Blast_Score=125, Evalue=5e-29,
Organism=Drosophila melanogaster, GI24653604, Length=364, Percent_Identity=29.3956043956044, Blast_Score=125, Evalue=5e-29,
Organism=Drosophila melanogaster, GI28574119, Length=362, Percent_Identity=27.6243093922652, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI28574118, Length=265, Percent_Identity=31.3207547169811, Blast_Score=99, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 38746; Mature: 38615

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNNINIKEGEACSIEKKEVRLTELSRTSGAAKIAPGVLSKILSKLPKMESENLIVGIET
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHCHHHHHHHHHHCCCCCCCCEEEEEEE
ADDAAVYKINDDTAMIQTLDFFTPIVDDPYMFGQIAAANSLSDVYAMGGKPVVALNIVCF
CCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHCCCCCEEEEEEEEC
PSCLPIEVLGEILKGGADKVMESGAVVIGGHTVDDNEPKYGLSVTGIVHPDKVLKNYGCK
CCCCCHHHHHHHHCCCHHHHHHCCCEEEECEEECCCCCCCCEEEEEEECHHHHHHHCCCC
EGEVLITTKPLGIGIINTAIKGDMASKEAKDAAVKSMSTLNKYAGEIITKYNISACTDIT
CCCEEEEECCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHCCCC
GFGFLGHAYEMASASNVTLKFNYKRISYIKEAEEYAEFGLVPAGAYANRDHIEGNFEFKN
CCCHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECC
VPVFMQDILFDPQTSGGLLISCSKEESEKIMKELNKLELKSSIVGEVIRKQDKYIIVE
CCHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
>Mature Secondary Structure 
SNNINIKEGEACSIEKKEVRLTELSRTSGAAKIAPGVLSKILSKLPKMESENLIVGIET
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHCHHHHHHHHHHCCCCCCCCEEEEEEE
ADDAAVYKINDDTAMIQTLDFFTPIVDDPYMFGQIAAANSLSDVYAMGGKPVVALNIVCF
CCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHCCCCCEEEEEEEEC
PSCLPIEVLGEILKGGADKVMESGAVVIGGHTVDDNEPKYGLSVTGIVHPDKVLKNYGCK
CCCCCHHHHHHHHCCCHHHHHHCCCEEEECEEECCCCCCCCEEEEEEECHHHHHHHCCCC
EGEVLITTKPLGIGIINTAIKGDMASKEAKDAAVKSMSTLNKYAGEIITKYNISACTDIT
CCCEEEEECCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHCCCC
GFGFLGHAYEMASASNVTLKFNYKRISYIKEAEEYAEFGLVPAGAYANRDHIEGNFEFKN
CCCHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECC
VPVFMQDILFDPQTSGGLLISCSKEESEKIMKELNKLELKSSIVGEVIRKQDKYIIVE
CCHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA