| Definition | Clostridium botulinum A str. Hall, complete genome. |
|---|---|
| Accession | NC_009698 |
| Length | 3,760,560 |
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The map label for this gene is lytG [H]
Identifier: 153936673
GI number: 153936673
Start: 1830603
End: 1831532
Strand: Direct
Name: lytG [H]
Synonym: CLC_1726
Alternate gene names: 153936673
Gene position: 1830603-1831532 (Clockwise)
Preceding gene: 153934807
Following gene: 153935528
Centisome position: 48.68
GC content: 24.95
Gene sequence:
>930_bases ATGAAAAAAGCAACAGGTTTGATTTTAAAGCTAATGATATTAGTATTATTAGCTTTTACAATTTTTATAATGTTTAATTC ATTAATTTTAAATAAGAAAAATGAAAGATTTTTACCAGAGAATGCAATGAATATTTATATTAAAGCTGCTGATGAAGTTA GTGAAAATAAACTACAGGTTAATTGGAAATATATAGCTGCTTTAGATGGGGTTAAAAACAAAGAGGATTTTTCTAAAGCT AATATAGAAGATTCAAAGGTTTTAGGGGAAAAATTTTTAGAAATTAGTAAGAGCACAAAATTTAAAAATACTAATTATAG ATTATTGACTTTGGATGAAGTTATAAGTAAAATGTCTTTTACTGAAGAAGAAAAAAAGAATGTACATAAATATTTAGACA AATTAAATAATATATATCCTATAACACCAGATGAATATAAAAGACAGTTTATAGATGAATTGATACCTATATCAAAGGAA TTATATGATGAATATGGGATTTTACCTTCTGTAACTATAGGACAGGCTATTTTAGAATCAGATTGGGGTAGATCGGAACT TAGTAAAAAAGGAAATAATTTATTTGGAATTAAGGCTACTCCTTCTTGGCAAGGTAAGGTTTTAAATATGGAAACCTCAG AAAATTATAATGATAAAATTAAAGATAACTTTAGATATTATTCTTCCAAAGAGGATTCTATAAAGGATTATGCAAATTTT TTAGTTAAGAATAAGAGATATAGAGAAAATAAAGTTTTTAGAGCTACAGAATATAAGACACAAGCAAAAGCCATAGAAAA GGCAGGGTATAGTACTAAAAAAGATAAGGATGGTAATTTATTATATAGTAGTTTACTTGGAAAAATTATAAGAGAGTATA ATTTGCAGTTAATAGATAGTAAAACTCAAGAGGAGATAAGTAAAAAATAA
Upstream 100 bases:
>100_bases GCTTTTTAAATAATTTTTATAATAAAATTATTTAGATTTTTGATATAATAATTTTTACAAAGACATATATAAGCTATATC AGGAAGTTATGGAGGGTTTT
Downstream 100 bases:
>100_bases AGTAAAAATTGTCGCTATTAAATTATTAATACTCCCTATTATCACAACTAGATTGTGAATAGGGAGTATTTTAATTAAAA TTGAATATAGAATTTAACTT
Product: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase domain-containing protein
Products: NA
Alternate protein names: Autolysin lytG; Exo-beta-N-acetylglucosaminidase lytG; Peptidoglycan hydrolase lytG [H]
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MKKATGLILKLMILVLLAFTIFIMFNSLILNKKNERFLPENAMNIYIKAADEVSENKLQVNWKYIAALDGVKNKEDFSKA NIEDSKVLGEKFLEISKSTKFKNTNYRLLTLDEVISKMSFTEEEKKNVHKYLDKLNNIYPITPDEYKRQFIDELIPISKE LYDEYGILPSVTIGQAILESDWGRSELSKKGNNLFGIKATPSWQGKVLNMETSENYNDKIKDNFRYYSSKEDSIKDYANF LVKNKRYRENKVFRATEYKTQAKAIEKAGYSTKKDKDGNLLYSSLLGKIIREYNLQLIDSKTQEEISKK
Sequences:
>Translated_309_residues MKKATGLILKLMILVLLAFTIFIMFNSLILNKKNERFLPENAMNIYIKAADEVSENKLQVNWKYIAALDGVKNKEDFSKA NIEDSKVLGEKFLEISKSTKFKNTNYRLLTLDEVISKMSFTEEEKKNVHKYLDKLNNIYPITPDEYKRQFIDELIPISKE LYDEYGILPSVTIGQAILESDWGRSELSKKGNNLFGIKATPSWQGKVLNMETSENYNDKIKDNFRYYSSKEDSIKDYANF LVKNKRYRENKVFRATEYKTQAKAIEKAGYSTKKDKDGNLLYSSLLGKIIREYNLQLIDSKTQEEISKK >Mature_309_residues MKKATGLILKLMILVLLAFTIFIMFNSLILNKKNERFLPENAMNIYIKAADEVSENKLQVNWKYIAALDGVKNKEDFSKA NIEDSKVLGEKFLEISKSTKFKNTNYRLLTLDEVISKMSFTEEEKKNVHKYLDKLNNIYPITPDEYKRQFIDELIPISKE LYDEYGILPSVTIGQAILESDWGRSELSKKGNNLFGIKATPSWQGKVLNMETSENYNDKIKDNFRYYSSKEDSIKDYANF LVKNKRYRENKVFRATEYKTQAKAIEKAGYSTKKDKDGNLLYSSLLGKIIREYNLQLIDSKTQEEISKK
Specific function: Is the major glucosaminidase responsible for peptidoglycan structural determination during vegetative growth. Acts processively from the ends of the glycan strands. Also plays a role in motility, chemotaxis and cell division [H]
COG id: COG1705
COG function: function code NU; Muramidase (flagellum-specific)
Gene ontology:
Cell location: Secreted, cell wall [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 73 family [H]
Homologues:
Organism=Escherichia coli, GI1787321, Length=132, Percent_Identity=32.5757575757576, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000423 - InterPro: IPR013338 - InterPro: IPR002901 [H]
Pfam domain/function: PF01832 Glucosaminidase [H]
EC number: 3.2.1.- [C]
Molecular weight: Translated: 35945; Mature: 35945
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKATGLILKLMILVLLAFTIFIMFNSLILNKKNERFLPENAMNIYIKAADEVSENKLQV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCEEEE NWKYIAALDGVKNKEDFSKANIEDSKVLGEKFLEISKSTKFKNTNYRLLTLDEVISKMSF EEEEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHC TEEEKKNVHKYLDKLNNIYPITPDEYKRQFIDELIPISKELYDEYGILPSVTIGQAILES CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC DWGRSELSKKGNNLFGIKATPSWQGKVLNMETSENYNDKIKDNFRYYSSKEDSIKDYANF CCCHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHH LVKNKRYRENKVFRATEYKTQAKAIEKAGYSTKKDKDGNLLYSSLLGKIIREYNLQLIDS HHHCCHHHHCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCC KTQEEISKK HHHHHHHCC >Mature Secondary Structure MKKATGLILKLMILVLLAFTIFIMFNSLILNKKNERFLPENAMNIYIKAADEVSENKLQV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCEEEE NWKYIAALDGVKNKEDFSKANIEDSKVLGEKFLEISKSTKFKNTNYRLLTLDEVISKMSF EEEEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHC TEEEKKNVHKYLDKLNNIYPITPDEYKRQFIDELIPISKELYDEYGILPSVTIGQAILES CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC DWGRSELSKKGNNLFGIKATPSWQGKVLNMETSENYNDKIKDNFRYYSSKEDSIKDYANF CCCHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHH LVKNKRYRENKVFRATEYKTQAKAIEKAGYSTKKDKDGNLLYSSLLGKIIREYNLQLIDS HHHCCHHHHCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCC KTQEEISKK HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]