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The map label for this gene is lemA [H]

Identifier: 153936635

GI number: 153936635

Start: 544369

End: 544938

Strand: Direct

Name: lemA [H]

Synonym: CLC_0536

Alternate gene names: 153936635

Gene position: 544369-544938 (Clockwise)

Preceding gene: 153937629

Following gene: 153936820

Centisome position: 14.48

GC content: 29.47

Gene sequence:

>570_bases
ATGAAAAAAGGATTGAGAAATACCCTTATAGTAGTAGGGATAATTTTATTAATACTATTTCCTTTAATAGGAACGTATAA
CAAATTAGTATCTATGGAGCAAAATGTTAGTAGAGCAGCTTCTAATATTGATACTAATCTTCAAAGAAGATCTGATCTTA
TATCAAATTTAGTAGAAACAGTTAAAGGTTATGCTGCACAGGAAAAAGATATTTTTAAAGGAGTAGCAGATGCAAGATCA
AAATTAGCAGGAGCCCAAAAAATAGATCAAAAAGCTCAAGCTAATGAAGAGTTATCAGGAGCTTTATCAAGATTATTAGT
AGTAGTGGAAAGATATCCAGACTTAAAATCTAGTCAAAATTTTAAAGATTTATCAGTAGCTATAGAAGGAACTGAAAATA
GAATAGCTATTGCAAGGCAAGATTATAATGAATCAGTAAATAATTATAATACTGGTATTAGAAAATTTCCAAATTCTATT
ATAGCTGGTATGTTTAGATTTAGTGAAAAACCATATTTTAAAGCAGAAGCAGGAGCAGGTAAAGCACCCAAAGTAGATTT
CTCAAAGTAG

Upstream 100 bases:

>100_bases
AGGAAATTCAGCAAAAAAACTTATAAATAATTATATTTAGTGAAAATTTTGTTAAATTAATGTATAATATTAATAAAAAT
ATTAAAATGGTGGTGAGTTT

Downstream 100 bases:

>100_bases
GTGAAAAACGTGGAAAATTTTTTTGAAAAATATCTAAGCAGAAGGAGATTAACTTTTGTATTAATAATGACCTTAATTAT
GACCTTCCCAATGCTTATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKKGLRNTLIVVGIILLILFPLIGTYNKLVSMEQNVSRAASNIDTNLQRRSDLISNLVETVKGYAAQEKDIFKGVADARS
KLAGAQKIDQKAQANEELSGALSRLLVVVERYPDLKSSQNFKDLSVAIEGTENRIAIARQDYNESVNNYNTGIRKFPNSI
IAGMFRFSEKPYFKAEAGAGKAPKVDFSK

Sequences:

>Translated_189_residues
MKKGLRNTLIVVGIILLILFPLIGTYNKLVSMEQNVSRAASNIDTNLQRRSDLISNLVETVKGYAAQEKDIFKGVADARS
KLAGAQKIDQKAQANEELSGALSRLLVVVERYPDLKSSQNFKDLSVAIEGTENRIAIARQDYNESVNNYNTGIRKFPNSI
IAGMFRFSEKPYFKAEAGAGKAPKVDFSK
>Mature_189_residues
MKKGLRNTLIVVGIILLILFPLIGTYNKLVSMEQNVSRAASNIDTNLQRRSDLISNLVETVKGYAAQEKDIFKGVADARS
KLAGAQKIDQKAQANEELSGALSRLLVVVERYPDLKSSQNFKDLSVAIEGTENRIAIARQDYNESVNNYNTGIRKFPNSI
IAGMFRFSEKPYFKAEAGAGKAPKVDFSK

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 20887; Mature: 20887

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKGLRNTLIVVGIILLILFPLIGTYNKLVSMEQNVSRAASNIDTNLQRRSDLISNLVET
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKGYAAQEKDIFKGVADARSKLAGAQKIDQKAQANEELSGALSRLLVVVERYPDLKSSQN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
FKDLSVAIEGTENRIAIARQDYNESVNNYNTGIRKFPNSIIAGMFRFSEKPYFKAEAGAG
CCHHEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCC
KAPKVDFSK
CCCCCCCCC
>Mature Secondary Structure
MKKGLRNTLIVVGIILLILFPLIGTYNKLVSMEQNVSRAASNIDTNLQRRSDLISNLVET
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKGYAAQEKDIFKGVADARSKLAGAQKIDQKAQANEELSGALSRLLVVVERYPDLKSSQN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
FKDLSVAIEGTENRIAIARQDYNESVNNYNTGIRKFPNSIIAGMFRFSEKPYFKAEAGAG
CCHHEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCC
KAPKVDFSK
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]