| Definition | Clostridium botulinum A str. Hall, complete genome. |
|---|---|
| Accession | NC_009698 |
| Length | 3,760,560 |
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The map label for this gene is cheY [H]
Identifier: 153936474
GI number: 153936474
Start: 1832578
End: 1833432
Strand: Direct
Name: cheY [H]
Synonym: CLC_1729
Alternate gene names: 153936474
Gene position: 1832578-1833432 (Clockwise)
Preceding gene: 153935528
Following gene: 153937398
Centisome position: 48.73
GC content: 28.07
Gene sequence:
>855_bases ATGAAAGATACTAAGGTAGTTATTGTAGATGATTCTCCTTTTTCAATTAGTATTATAAAAGACATATTAGAGGAAAATGG GTTAACTGTAGTTGGAGAAGCAGGTAACTTAGAAGAAGTTATAAATGTAGTAAAGGATAAAAAACCGGATATTGTAACCA TGGATATGACTTTACCAGGTACAGATGGAATAGAATGTATAAAAGCTATTAATAAAATAAATAAAAATGTAAAGGTAATA GTTATAAGTTCTATGATGGACGAAGAAATAGTGAAAAAAGCTAATAAAAATAAGGTTTGTGGATATATTCAAAAACCTAT AGATCCAGAAGAACTTATAGCAACAATAGAGAAGGTTGTTATGAAAGAAGAGTTATTTTTACAACTTGAAAATGATTATT TTCAAATTTTCAAAGAATCCTTTAAAGATGCTTTAAATAAATTTACTAAAACTACTGCAGAATTTTCAGAAGATACAAAG TGTACTATTTCAGAAACCTCTAGAGGTATGGTTGTAGTTATAGGTATAATAGGTAATTTTTCAGGAAGGATGATTTTAGA TTTATCACAAGAAACAGCTAATAGTATGGTTAATTTTATGTTAAAAAGAGAACCAAAGGATATGAATGAGGTTTTAAATG TCATTGGTGAGTTTTCTAATATTGTAGCTGGGAATGCATGTTCTATGCTAAATAGAAAAAGTAAGGTGTTTGGATTAAGA ATAGCTCCTCCAAGTATATTTTATGGTAAATCTCTTAATATATCTCAAAGCTTAATAAAGAGCTTATCAGTAGAATCAAA TACAGAATTTGGGCAAATTTATATGAATGTAGGCTTCAAGAGAGGTGAATCATAA
Upstream 100 bases:
>100_bases TATAAATTGTTTAAATTTTAAGAAAAATATATTAAAATAAAAATAATAAGAAATAATTTCATTTATGTTATAAATTTTGG AAGAAAGAAGAGGGAAAAAT
Downstream 100 bases:
>100_bases TGGATGCAAAATATATTAATCCTTTTATAGATTCTTTTTATAATGTATTACCACAACTTGGTTTTTCTAATGTTACAAGA GAGGATGTTGCTATAAAAAA
Product: response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MKDTKVVIVDDSPFSISIIKDILEENGLTVVGEAGNLEEVINVVKDKKPDIVTMDMTLPGTDGIECIKAINKINKNVKVI VISSMMDEEIVKKANKNKVCGYIQKPIDPEELIATIEKVVMKEELFLQLENDYFQIFKESFKDALNKFTKTTAEFSEDTK CTISETSRGMVVVIGIIGNFSGRMILDLSQETANSMVNFMLKREPKDMNEVLNVIGEFSNIVAGNACSMLNRKSKVFGLR IAPPSIFYGKSLNISQSLIKSLSVESNTEFGQIYMNVGFKRGES
Sequences:
>Translated_284_residues MKDTKVVIVDDSPFSISIIKDILEENGLTVVGEAGNLEEVINVVKDKKPDIVTMDMTLPGTDGIECIKAINKINKNVKVI VISSMMDEEIVKKANKNKVCGYIQKPIDPEELIATIEKVVMKEELFLQLENDYFQIFKESFKDALNKFTKTTAEFSEDTK CTISETSRGMVVVIGIIGNFSGRMILDLSQETANSMVNFMLKREPKDMNEVLNVIGEFSNIVAGNACSMLNRKSKVFGLR IAPPSIFYGKSLNISQSLIKSLSVESNTEFGQIYMNVGFKRGES >Mature_284_residues MKDTKVVIVDDSPFSISIIKDILEENGLTVVGEAGNLEEVINVVKDKKPDIVTMDMTLPGTDGIECIKAINKINKNVKVI VISSMMDEEIVKKANKNKVCGYIQKPIDPEELIATIEKVVMKEELFLQLENDYFQIFKESFKDALNKFTKTTAEFSEDTK CTISETSRGMVVVIGIIGNFSGRMILDLSQETANSMVNFMLKREPKDMNEVLNVIGEFSNIVAGNACSMLNRKSKVFGLR IAPPSIFYGKSLNISQSLIKSLSVESNTEFGQIYMNVGFKRGES
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheY seems to regulate the clockwise (CW) rotation [H]
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788222, Length=115, Percent_Identity=31.304347826087, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1786599, Length=120, Percent_Identity=27.5, Blast_Score=64, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 31621; Mature: 31621
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDTKVVIVDDSPFSISIIKDILEENGLTVVGEAGNLEEVINVVKDKKPDIVTMDMTLPG CCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEEECCC TDGIECIKAINKINKNVKVIVISSMMDEEIVKKANKNKVCGYIQKPIDPEELIATIEKVV CCHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHH MKEELFLQLENDYFQIFKESFKDALNKFTKTTAEFSEDTKCTISETSRGMVVVIGIIGNF HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEECCC SGRMILDLSQETANSMVNFMLKREPKDMNEVLNVIGEFSNIVAGNACSMLNRKSKVFGLR CCEEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEE IAPPSIFYGKSLNISQSLIKSLSVESNTEFGQIYMNVGFKRGES ECCCCEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCC >Mature Secondary Structure MKDTKVVIVDDSPFSISIIKDILEENGLTVVGEAGNLEEVINVVKDKKPDIVTMDMTLPG CCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEEECCC TDGIECIKAINKINKNVKVIVISSMMDEEIVKKANKNKVCGYIQKPIDPEELIATIEKVV CCHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHH MKEELFLQLENDYFQIFKESFKDALNKFTKTTAEFSEDTKCTISETSRGMVVVIGIIGNF HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEECCC SGRMILDLSQETANSMVNFMLKREPKDMNEVLNVIGEFSNIVAGNACSMLNRKSKVFGLR CCEEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEE IAPPSIFYGKSLNISQSLIKSLSVESNTEFGQIYMNVGFKRGES ECCCCEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8550470; 10360571; 9521117 [H]