Click here to switch to the map view.

The map label for this gene is 153936473

Identifier: 153936473

GI number: 153936473

Start: 2161525

End: 2162475

Strand: Reverse

Name: 153936473

Synonym: CLC_2038

Alternate gene names: NA

Gene position: 2162475-2161525 (Counterclockwise)

Preceding gene: 153935505

Following gene: 153937447

Centisome position: 57.5

GC content: 27.97

Gene sequence:

>951_bases
ATGATAGTGGCAGCTTGGTATCCTATTATGCAATATAAATTAAGTTTTGGTGTTTTTGATAATTTAAAAAGGCCTATAAA
TTATGTAGCTTTAAAATATGGATTTACTTCAAATTGTGATGAAAGTGAGCTTTTAAAATTCTTATGTGAAAGTGAAGATA
AGGAACTTAAAAAGATGATGCGAGATTTAACTTGTATGGTTCCCTATAGATTACTATCGCCATTTTTCATAGAGGATCTT
AAAGGGCAAAAATCTAGTAGTAAAAATAAAATAATCGAAAAACTATCCCTAGAAAGTGACACATGTTTTTATAAAATTAT
TAAAGAAGGCAAAAATAGGATTTTAATAAATGAAAATTGGGCTCAGTATCTTAATGAAAACTATAGAGTAATAAAATCTT
GGATATATTATAAACTTGTATGTTTTCTTCAAAAAAGAAATCCTAATGTTCCAGCTATAGCCTTTAAGCTTGAAGCATCT
AAAAATAGAGATTTAGCTTCAGCCACAAAGATTTGGAAAGAAATTATTGTTTCAAAGGGAGCTATAGATATTTATACAGG
TAAAGATTTTACAAAAGAAAACTATGAAATTTATGGAGGCCTTAGTATAGACCATTTTATTCCTTGGAGTTTTGTACTTC
ATGATGAGATGTGGAATCTTGTGCCAACATTTAAAAATATAAATAGTTCTAAAAGTGATAAGATCCTTAACTATAATAGA
TATATTGATGATTTTTGTGATATGCAGTATATGGCGGTTACATACATTTTAGAAAAAAGAAAGCAAAAAGATTTAGAAAG
CTATATAGATGCTTTGAAAATAGAAAACTTTCAAGAATATTTAAAGTACAAGCCTAAAGAAGACTTTACTAAGAAACTAA
AGCAATGTATTTCGCCACTTTATCAGATAGCTGAGAACCAAGGGTTTGAGGTTATTGATAGATTTTACTAG

Upstream 100 bases:

>100_bases
TAAAGTTGTTGCCAGCTACAAAATGTATTAGCTTTTTGGAATATTAGAGGAAGTAACATTAGAAAATACTGAAATAGAAT
TTAATAGAATAGTAGCTAGA

Downstream 100 bases:

>100_bases
AATATAAAACCCTTCGTCTCTACCAAACGAGTATTATACGAACACTTATTACTTTAAAGGCGGCTTTGTCGTTACAGTAT
TATTATAATATCAAAGTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MIVAAWYPIMQYKLSFGVFDNLKRPINYVALKYGFTSNCDESELLKFLCESEDKELKKMMRDLTCMVPYRLLSPFFIEDL
KGQKSSSKNKIIEKLSLESDTCFYKIIKEGKNRILINENWAQYLNENYRVIKSWIYYKLVCFLQKRNPNVPAIAFKLEAS
KNRDLASATKIWKEIIVSKGAIDIYTGKDFTKENYEIYGGLSIDHFIPWSFVLHDEMWNLVPTFKNINSSKSDKILNYNR
YIDDFCDMQYMAVTYILEKRKQKDLESYIDALKIENFQEYLKYKPKEDFTKKLKQCISPLYQIAENQGFEVIDRFY

Sequences:

>Translated_316_residues
MIVAAWYPIMQYKLSFGVFDNLKRPINYVALKYGFTSNCDESELLKFLCESEDKELKKMMRDLTCMVPYRLLSPFFIEDL
KGQKSSSKNKIIEKLSLESDTCFYKIIKEGKNRILINENWAQYLNENYRVIKSWIYYKLVCFLQKRNPNVPAIAFKLEAS
KNRDLASATKIWKEIIVSKGAIDIYTGKDFTKENYEIYGGLSIDHFIPWSFVLHDEMWNLVPTFKNINSSKSDKILNYNR
YIDDFCDMQYMAVTYILEKRKQKDLESYIDALKIENFQEYLKYKPKEDFTKKLKQCISPLYQIAENQGFEVIDRFY
>Mature_316_residues
MIVAAWYPIMQYKLSFGVFDNLKRPINYVALKYGFTSNCDESELLKFLCESEDKELKKMMRDLTCMVPYRLLSPFFIEDL
KGQKSSSKNKIIEKLSLESDTCFYKIIKEGKNRILINENWAQYLNENYRVIKSWIYYKLVCFLQKRNPNVPAIAFKLEAS
KNRDLASATKIWKEIIVSKGAIDIYTGKDFTKENYEIYGGLSIDHFIPWSFVLHDEMWNLVPTFKNINSSKSDKILNYNR
YIDDFCDMQYMAVTYILEKRKQKDLESYIDALKIENFQEYLKYKPKEDFTKKLKQCISPLYQIAENQGFEVIDRFY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37586; Mature: 37586

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVAAWYPIMQYKLSFGVFDNLKRPINYVALKYGFTSNCDESELLKFLCESEDKELKKMM
CEEEEHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHH
RDLTCMVPYRLLSPFFIEDLKGQKSSSKNKIIEKLSLESDTCFYKIIKEGKNRILINENW
HHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCEEEECCCH
AQYLNENYRVIKSWIYYKLVCFLQKRNPNVPAIAFKLEASKNRDLASATKIWKEIIVSKG
HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCC
AIDIYTGKDFTKENYEIYGGLSIDHFIPWSFVLHDEMWNLVPTFKNINSSKSDKILNYNR
CEEEECCCCCCCCCCEEEECCEEHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECHHH
YIDDFCDMQYMAVTYILEKRKQKDLESYIDALKIENFQEYLKYKPKEDFTKKLKQCISPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
YQIAENQGFEVIDRFY
HHHHHCCCHHHHHHCC
>Mature Secondary Structure
MIVAAWYPIMQYKLSFGVFDNLKRPINYVALKYGFTSNCDESELLKFLCESEDKELKKMM
CEEEEHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHH
RDLTCMVPYRLLSPFFIEDLKGQKSSSKNKIIEKLSLESDTCFYKIIKEGKNRILINENW
HHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCEEEECCCH
AQYLNENYRVIKSWIYYKLVCFLQKRNPNVPAIAFKLEASKNRDLASATKIWKEIIVSKG
HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCC
AIDIYTGKDFTKENYEIYGGLSIDHFIPWSFVLHDEMWNLVPTFKNINSSKSDKILNYNR
CEEEECCCCCCCCCCEEEECCEEHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECHHH
YIDDFCDMQYMAVTYILEKRKQKDLESYIDALKIENFQEYLKYKPKEDFTKKLKQCISPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
YQIAENQGFEVIDRFY
HHHHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA