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The map label for this gene is yqeB [H]

Identifier: 153936382

GI number: 153936382

Start: 2951484

End: 2952332

Strand: Direct

Name: yqeB [H]

Synonym: CLC_2789

Alternate gene names: 153936382

Gene position: 2951484-2952332 (Clockwise)

Preceding gene: 153937075

Following gene: 153936043

Centisome position: 78.49

GC content: 29.92

Gene sequence:

>849_bases
ATGATAAACAACATATATAAAGATATTGTAATTGTTAGAGGTGGTGGTGATTTAGCTTCTGGAACTATACACAAACTTCA
TAGAAGCGGTTTTAAAATACTAGTTTTAGAAACCTACTATCCTACGTCTATAAGAAGAAACGTATGTTATAGTGAAGCTA
TATATACCGGGAAAATTACTATTGAAAATACTACTGCCATAAGAGTAAGTAATTTTAATGAAATATTAAAATGCTGGCAA
AATAATGAAATTCCTATCACAGTAGATCCTCGTGGTAAATTTATAGAAATGCTAAAACCTAGAATTTTGATAGACGCTAT
ATTAGCAAAGAAAAACTTAGGTACAAGGATAAATATGGCAGAAATAACTATAGGTCTTGGACCAGGTTTTGAAGCTGGTA
AAGATGTGCATGCAGTTATAGAAACCATGAGAGGTCATAATTTAGGAAGAGTTATATTAAAAGGAGAAGCCATTAAAAAT
ACAGGAATACCTGGTGAAATTGGAGGGTATTCTAAAGAAAGAGTTATATACAGCCCAGCTAAAGGCACTATTCAAAATGT
AAAAGAAATTGGTGATTTTGTTTCATCAGGTGAAATTTTAGCTTATGTAGATAACATAGAAATTAAAACAAAGATAAGTG
GATTGTTAAGAGGACTTATAAGAAACGGTAGTATAATTGAAAAAGGATTAAAAATAGCCGATGTAGATCCTAGATGTTAT
GAAATGCAAAATTGTTATACTATTTCTGATAAAGCACGAAATATTGCTGGTGGTGTATTAGAAGCTATTTTATATTTTAC
AAATAAAAACACAGAAAGTAGGTTAAATTTATGGAACAAAATATCCTAA

Upstream 100 bases:

>100_bases
TTTGTAAATTTAAAAAATGGTTATTCTTTGTTTGATATTGATACTCCAAAGGATTATGAATATATATTAAACAAAAATTT
GTACCAAGGATGTGATAGCT

Downstream 100 bases:

>100_bases
AAAAAATTTACAAAAGTGTAGATAAAGGTGATACTGTAGCTTTAGCTACTATAACTCATATTTCAGGATCTACGCCTGGT
AAAGCTGGATCAATAATGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MINNIYKDIVIVRGGGDLASGTIHKLHRSGFKILVLETYYPTSIRRNVCYSEAIYTGKITIENTTAIRVSNFNEILKCWQ
NNEIPITVDPRGKFIEMLKPRILIDAILAKKNLGTRINMAEITIGLGPGFEAGKDVHAVIETMRGHNLGRVILKGEAIKN
TGIPGEIGGYSKERVIYSPAKGTIQNVKEIGDFVSSGEILAYVDNIEIKTKISGLLRGLIRNGSIIEKGLKIADVDPRCY
EMQNCYTISDKARNIAGGVLEAILYFTNKNTESRLNLWNKIS

Sequences:

>Translated_282_residues
MINNIYKDIVIVRGGGDLASGTIHKLHRSGFKILVLETYYPTSIRRNVCYSEAIYTGKITIENTTAIRVSNFNEILKCWQ
NNEIPITVDPRGKFIEMLKPRILIDAILAKKNLGTRINMAEITIGLGPGFEAGKDVHAVIETMRGHNLGRVILKGEAIKN
TGIPGEIGGYSKERVIYSPAKGTIQNVKEIGDFVSSGEILAYVDNIEIKTKISGLLRGLIRNGSIIEKGLKIADVDPRCY
EMQNCYTISDKARNIAGGVLEAILYFTNKNTESRLNLWNKIS
>Mature_282_residues
MINNIYKDIVIVRGGGDLASGTIHKLHRSGFKILVLETYYPTSIRRNVCYSEAIYTGKITIENTTAIRVSNFNEILKCWQ
NNEIPITVDPRGKFIEMLKPRILIDAILAKKNLGTRINMAEITIGLGPGFEAGKDVHAVIETMRGHNLGRVILKGEAIKN
TGIPGEIGGYSKERVIYSPAKGTIQNVKEIGDFVSSGEILAYVDNIEIKTKISGLLRGLIRNGSIIEKGLKIADVDPRCY
EMQNCYTISDKARNIAGGVLEAILYFTNKNTESRLNLWNKIS

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789240, Length=266, Percent_Identity=45.1127819548872, Blast_Score=251, Evalue=3e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR017695
- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 31271; Mature: 31271

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINNIYKDIVIVRGGGDLASGTIHKLHRSGFKILVLETYYPTSIRRNVCYSEAIYTGKIT
CCCCEEEEEEEEECCCCCCCHHHHHHHHCCCEEEEEEEECCCHHHHHCCHHHEEEEEEEE
IENTTAIRVSNFNEILKCWQNNEIPITVDPRGKFIEMLKPRILIDAILAKKNLGTRINMA
EECCEEEEECCHHHHHHHHCCCCEEEEECCCCHHHHHHCHHHHHHHHHHHCCCCCEEEEE
EITIGLGPGFEAGKDVHAVIETMRGHNLGRVILKGEAIKNTGIPGEIGGYSKERVIYSPA
EEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEECCEEECCCCCCCCCCCCCCEEEECCC
KGTIQNVKEIGDFVSSGEILAYVDNIEIKTKISGLLRGLIRNGSIIEKGLKIADVDPRCY
CCHHHHHHHHHHHHCCCCEEEEEECEEEEHHHHHHHHHHHCCCCHHHCCCEEECCCCHHH
EMQNCYTISDKARNIAGGVLEAILYFTNKNTESRLNLWNKIS
HHCCCEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MINNIYKDIVIVRGGGDLASGTIHKLHRSGFKILVLETYYPTSIRRNVCYSEAIYTGKIT
CCCCEEEEEEEEECCCCCCCHHHHHHHHCCCEEEEEEEECCCHHHHHCCHHHEEEEEEEE
IENTTAIRVSNFNEILKCWQNNEIPITVDPRGKFIEMLKPRILIDAILAKKNLGTRINMA
EECCEEEEECCHHHHHHHHCCCCEEEEECCCCHHHHHHCHHHHHHHHHHHCCCCCEEEEE
EITIGLGPGFEAGKDVHAVIETMRGHNLGRVILKGEAIKNTGIPGEIGGYSKERVIYSPA
EEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEECCEEECCCCCCCCCCCCCCEEEECCC
KGTIQNVKEIGDFVSSGEILAYVDNIEIKTKISGLLRGLIRNGSIIEKGLKIADVDPRCY
CCHHHHHHHHHHHHCCCCEEEEEECEEEEHHHHHHHHHHHCCCCHHHCCCEEECCCCHHH
EMQNCYTISDKARNIAGGVLEAILYFTNKNTESRLNLWNKIS
HHCCCEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]