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The map label for this gene is tupB [H]

Identifier: 153936271

GI number: 153936271

Start: 2000507

End: 2001178

Strand: Reverse

Name: tupB [H]

Synonym: CLC_1890

Alternate gene names: 153936271

Gene position: 2001178-2000507 (Counterclockwise)

Preceding gene: 153935876

Following gene: 153937873

Centisome position: 53.21

GC content: 29.17

Gene sequence:

>672_bases
ATGGAGCAGGGAATTTTTAATATAATAAATTTAAAAGAAATTATTCCTGTGGTATTAATGTCTCTTTATGTTTCATTAAC
TTCAACTTTAATCGCTTCAATATTGGGAATGCTTTTAGGCATTCCCTGTGCTTTATTAAACTTCAAATTAAAAAAGATTA
TGATTCAAATTAATCATACTTTAATGAGTATACCACCAGTTCTTATGGGATTATTGGTTTATCTTTTATTATCGAGAAAG
GGACCTTTAGGTGAATTTGAATTATTGTTTACTCCTACCGCTATGATAATAGCCCAGACATCACTTATATTTCCTATAGT
ATTTGGTCTTAGCATATCTATTATAGTAAAAAGTGGTAAAGATATAAAAAATACATGTACCACATTAGGGGCTAATAGAT
TTCAAACCTTTTTAATTATTATAAAAGAAAACAAGATACAATTACTATCAGTTGTAACAGCAGCCTTTGGAAGAGCTATA
TCTGAAGTTGGTGCAGTCATGATAGTAGGAGGAAATATTAAAGGATTTACAAGGGTTATGACCACATATATTGCATTGGA
GACAGGCAAAGGTAACTTTAATGAAGCTTTAGCAATAGGAGTAATATTACTAGTTATATCTTTTATAATTAATGCTATTC
TTCATTTTTTTCAAGGGAGTGAAAGTTTTTGA

Upstream 100 bases:

>100_bases
GGATGCTTTCTGATAAAGGGCAAAAACTTATAGGAGAGTATGGAAAAGAAAAATACGGACAAGCGCTTTTTGTAGCTAAT
GGAAAGAAATAGGTGATATT

Downstream 100 bases:

>100_bases
AAATAGAGGTAGTTAATGCAGTAAAAGAGTATGCTGGTAGGAAAGTATTGGATATAGAGCATATGGTTTTTAAAGAGGGA
AGTATATATGGAATATTAGG

Product: tungstate ABC transporter, permease protein

Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MEQGIFNIINLKEIIPVVLMSLYVSLTSTLIASILGMLLGIPCALLNFKLKKIMIQINHTLMSIPPVLMGLLVYLLLSRK
GPLGEFELLFTPTAMIIAQTSLIFPIVFGLSISIIVKSGKDIKNTCTTLGANRFQTFLIIIKENKIQLLSVVTAAFGRAI
SEVGAVMIVGGNIKGFTRVMTTYIALETGKGNFNEALAIGVILLVISFIINAILHFFQGSESF

Sequences:

>Translated_223_residues
MEQGIFNIINLKEIIPVVLMSLYVSLTSTLIASILGMLLGIPCALLNFKLKKIMIQINHTLMSIPPVLMGLLVYLLLSRK
GPLGEFELLFTPTAMIIAQTSLIFPIVFGLSISIIVKSGKDIKNTCTTLGANRFQTFLIIIKENKIQLLSVVTAAFGRAI
SEVGAVMIVGGNIKGFTRVMTTYIALETGKGNFNEALAIGVILLVISFIINAILHFFQGSESF
>Mature_223_residues
MEQGIFNIINLKEIIPVVLMSLYVSLTSTLIASILGMLLGIPCALLNFKLKKIMIQINHTLMSIPPVLMGLLVYLLLSRK
GPLGEFELLFTPTAMIIAQTSLIFPIVFGLSISIIVKSGKDIKNTCTTLGANRFQTFLIIIKENKIQLLSVVTAAFGRAI
SEVGAVMIVGGNIKGFTRVMTTYIALETGKGNFNEALAIGVILLVISFIINAILHFFQGSESF

Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4662

COG function: function code H; ABC-type tungstate transport system, periplasmic component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515
- InterPro:   IPR011866
- InterPro:   IPR005667 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24250; Mature: 24250

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQGIFNIINLKEIIPVVLMSLYVSLTSTLIASILGMLLGIPCALLNFKLKKIMIQINHT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMSIPPVLMGLLVYLLLSRKGPLGEFELLFTPTAMIIAQTSLIFPIVFGLSISIIVKSGK
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHEEEEEECCC
DIKNTCTTLGANRFQTFLIIIKENKIQLLSVVTAAFGRAISEVGAVMIVGGNIKGFTRVM
CHHHHHHHHCCHHHEEEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHH
TTYIALETGKGNFNEALAIGVILLVISFIINAILHFFQGSESF
HHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEQGIFNIINLKEIIPVVLMSLYVSLTSTLIASILGMLLGIPCALLNFKLKKIMIQINHT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMSIPPVLMGLLVYLLLSRKGPLGEFELLFTPTAMIIAQTSLIFPIVFGLSISIIVKSGK
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHEEEEEECCC
DIKNTCTTLGANRFQTFLIIIKENKIQLLSVVTAAFGRAISEVGAVMIVGGNIKGFTRVM
CHHHHHHHHCCHHHEEEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHH
TTYIALETGKGNFNEALAIGVILLVISFIINAILHFFQGSESF
HHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]

Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1708375 [H]