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The map label for this gene is 153936254

Identifier: 153936254

GI number: 153936254

Start: 3242954

End: 3244222

Strand: Reverse

Name: 153936254

Synonym: CLC_3076

Alternate gene names: NA

Gene position: 3244222-3242954 (Counterclockwise)

Preceding gene: 153937736

Following gene: 153937303

Centisome position: 86.27

GC content: 31.13

Gene sequence:

>1269_bases
ATGATCATTAGTGCAGGAGGAGCATGGATTTTAAAAAGTTATAGAAAGAAGGGAAATGGATATTATAAAAGACTTCCATT
TTTACAGCAGTTTTATAGTAGATTTAAGACACATAGAAGTAATTTGTTTATGGTATACATTCTTCATTTTTTATTAATAG
GGTATTTTTCTATAAGGATATCAGGAGTGCTTCCTCTTGATAGAGTACAGGCGTTGTTTCCTTATGATTATGTGTGTTTA
GGAGAAAAAGAGGATCAAGAAACTTTTAAAGAATTTCAGAAAAAACTTTCTGAGAAGAGCCTAATACTTCCTATGGTACG
AGCCACAGTTGTCAGTGCAAGTGAAAAAAATAGTGGAAGTAGAATGGATATAAGTTTTCAGGGGCAGAACATAGGTATTT
CAGAGAGTAGTTATAATCAATTGACTGAAAGAAAATTAGGGCTCCGAAATAAAGAAATTTATATTTCCTTTCAACAGGAT
AAATCAGAAAAGGCGCATTTGCTAGATTTTTCAGTATTAAGTGGTAGTCCGAGAATGAGATTTGGAATGCCAGAACCTTA
TTTTTTTGAAGAGAGAGATAAAATTTTTGATTCAGATTATAAGGTTATAGGACAAGAACGTAGAATTATTGTTGGAAACC
TGGTAGGAGGAATGCAGGAGAATATTGTTGTTTTTTCTGATGAATATTTTAAATCAATATATTCTACTGGTGATGGGCCG
AGTATATTGGCATTGTTTAATATAAACAAAGACAAAGAGGAAGAAGCAGCTGTAAAATTTTCAGATTATGCAAAAGATCA
TATACAATATAGTGAATATGATTCACTTATTCAGCCTATATATGGGAAAAAAGTTTTACAAAACAACACCTTATTAGCTC
ATATGTTAAAATTGTTGGAATATCTATTCGTAATGACATTATTGTTGGTTAGCATATTATATGTTTTCGTTGTAAAGAGG
GTTTCAGAGTTGCCAGACACACGATCTAGAATGAAGCAGTTTAAATATTTAGGTATGAGGGAAGGATTGGATAGAAAAAT
TTTGGCATTTGAAAATAATGTTATGACAATTATGCCATTGGTATTGGCAATAGTAGCGAGCTTCTCATATATTTTTATTA
CTTTAAAGGTTCGCTATTTCACAAAGATAGAACAACAGGAATTTTGGCAATATGAGGTATGGATTATAGGAGTTTATACT
ATTATAAATTTAATTGTAGCATTTATAATAGGTAGAGTTATGATTTGTCTTGGAAATAGGGAGGAATGA

Upstream 100 bases:

>100_bases
TGTAGGAACAATATTGATGTTGTTTTCCAGCTATACATTTTCTAAACGTGTATGGACAGAGTCTATTTATCTTATTATTA
TGTTTTTGGTTGGATGTTAT

Downstream 100 bases:

>100_bases
TTATGGCAGTGATAGAAACAAACAATTTGGTTCGTAATTATAAATTAAATGGAAGTAATCTGAATGAGGGGACCGAGGTA
AAGGTAATAAAAGGACTAGA

Product: putative ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MIISAGGAWILKSYRKKGNGYYKRLPFLQQFYSRFKTHRSNLFMVYILHFLLIGYFSIRISGVLPLDRVQALFPYDYVCL
GEKEDQETFKEFQKKLSEKSLILPMVRATVVSASEKNSGSRMDISFQGQNIGISESSYNQLTERKLGLRNKEIYISFQQD
KSEKAHLLDFSVLSGSPRMRFGMPEPYFFEERDKIFDSDYKVIGQERRIIVGNLVGGMQENIVVFSDEYFKSIYSTGDGP
SILALFNINKDKEEEAAVKFSDYAKDHIQYSEYDSLIQPIYGKKVLQNNTLLAHMLKLLEYLFVMTLLLVSILYVFVVKR
VSELPDTRSRMKQFKYLGMREGLDRKILAFENNVMTIMPLVLAIVASFSYIFITLKVRYFTKIEQQEFWQYEVWIIGVYT
IINLIVAFIIGRVMICLGNREE

Sequences:

>Translated_422_residues
MIISAGGAWILKSYRKKGNGYYKRLPFLQQFYSRFKTHRSNLFMVYILHFLLIGYFSIRISGVLPLDRVQALFPYDYVCL
GEKEDQETFKEFQKKLSEKSLILPMVRATVVSASEKNSGSRMDISFQGQNIGISESSYNQLTERKLGLRNKEIYISFQQD
KSEKAHLLDFSVLSGSPRMRFGMPEPYFFEERDKIFDSDYKVIGQERRIIVGNLVGGMQENIVVFSDEYFKSIYSTGDGP
SILALFNINKDKEEEAAVKFSDYAKDHIQYSEYDSLIQPIYGKKVLQNNTLLAHMLKLLEYLFVMTLLLVSILYVFVVKR
VSELPDTRSRMKQFKYLGMREGLDRKILAFENNVMTIMPLVLAIVASFSYIFITLKVRYFTKIEQQEFWQYEVWIIGVYT
IINLIVAFIIGRVMICLGNREE
>Mature_422_residues
MIISAGGAWILKSYRKKGNGYYKRLPFLQQFYSRFKTHRSNLFMVYILHFLLIGYFSIRISGVLPLDRVQALFPYDYVCL
GEKEDQETFKEFQKKLSEKSLILPMVRATVVSASEKNSGSRMDISFQGQNIGISESSYNQLTERKLGLRNKEIYISFQQD
KSEKAHLLDFSVLSGSPRMRFGMPEPYFFEERDKIFDSDYKVIGQERRIIVGNLVGGMQENIVVFSDEYFKSIYSTGDGP
SILALFNINKDKEEEAAVKFSDYAKDHIQYSEYDSLIQPIYGKKVLQNNTLLAHMLKLLEYLFVMTLLLVSILYVFVVKR
VSELPDTRSRMKQFKYLGMREGLDRKILAFENNVMTIMPLVLAIVASFSYIFITLKVRYFTKIEQQEFWQYEVWIIGVYT
IINLIVAFIIGRVMICLGNREE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49182; Mature: 49182

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIISAGGAWILKSYRKKGNGYYKRLPFLQQFYSRFKTHRSNLFMVYILHFLLIGYFSIRI
CEECCCHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHE
SGVLPLDRVQALFPYDYVCLGEKEDQETFKEFQKKLSEKSLILPMVRATVVSASEKNSGS
ECCCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
RMDISFQGQNIGISESSYNQLTERKLGLRNKEIYISFQQDKSEKAHLLDFSVLSGSPRMR
EEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHEEEEHEECCCCCEE
FGMPEPYFFEERDKIFDSDYKVIGQERRIIVGNLVGGMQENIVVFSDEYFKSIYSTGDGP
CCCCCCCCCCCHHHHCCCCHHHHCCCCCEEEEHHHCCCCCCEEEECHHHHHHHHCCCCCC
SILALFNINKDKEEEAAVKFSDYAKDHIQYSEYDSLIQPIYGKKVLQNNTLLAHMLKLLE
CEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
YLFVMTLLLVSILYVFVVKRVSELPDTRSRMKQFKYLGMREGLDRKILAFENNVMTIMPL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHH
VLAIVASFSYIFITLKVRYFTKIEQQEFWQYEVWIIGVYTIINLIVAFIIGRVMICLGNR
HHHHHHHHHEEEEEEEEHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCC
EE
CC
>Mature Secondary Structure
MIISAGGAWILKSYRKKGNGYYKRLPFLQQFYSRFKTHRSNLFMVYILHFLLIGYFSIRI
CEECCCHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHE
SGVLPLDRVQALFPYDYVCLGEKEDQETFKEFQKKLSEKSLILPMVRATVVSASEKNSGS
ECCCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
RMDISFQGQNIGISESSYNQLTERKLGLRNKEIYISFQQDKSEKAHLLDFSVLSGSPRMR
EEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHEEEEHEECCCCCEE
FGMPEPYFFEERDKIFDSDYKVIGQERRIIVGNLVGGMQENIVVFSDEYFKSIYSTGDGP
CCCCCCCCCCCHHHHCCCCHHHHCCCCCEEEEHHHCCCCCCEEEECHHHHHHHHCCCCCC
SILALFNINKDKEEEAAVKFSDYAKDHIQYSEYDSLIQPIYGKKVLQNNTLLAHMLKLLE
CEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
YLFVMTLLLVSILYVFVVKRVSELPDTRSRMKQFKYLGMREGLDRKILAFENNVMTIMPL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHH
VLAIVASFSYIFITLKVRYFTKIEQQEFWQYEVWIIGVYTIINLIVAFIIGRVMICLGNR
HHHHHHHHHEEEEEEEEHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCC
EE
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA