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The map label for this gene is 153936240

Identifier: 153936240

GI number: 153936240

Start: 2105006

End: 2107483

Strand: Reverse

Name: 153936240

Synonym: CLC_1984

Alternate gene names: NA

Gene position: 2107483-2105006 (Counterclockwise)

Preceding gene: 153935581

Following gene: 153934795

Centisome position: 56.04

GC content: 27.89

Gene sequence:

>2478_bases
GTGAAAAAGTTAAAAAAATCTAATTTGAAAAACAAAATGAAATTAAGGGTATTGTCATATATAATGATCTTAATGTTCTT
AACAATAAATACTGAAATAGTATTTGCTAAAACTAGTTCCAATTTAAAAACAGAGAATATAAAAATTTTATTAAATGCCC
ATAGAAATTTGGGTATAACTGAATTAAAATGGAATACAATAGAAGGAGCAAATTATCAGTTAAAAAGAGGAGAAAATAAA
GACAAGCTACAAGTAATAGAAGATAATATTACTGAAAATACTTTTATAGATGTTAATAGTATACAAGATAAAGAATATTA
TTATTGTATCATTGCCAAAAAGGATGATAAGGAGTTATATAAATCAAATGTAATTCAAGTTAAGGCTTTTATAGATAGTG
ATAAAGATGGATTATCAGATGACGAGGAGAAGCTTTATAAAACAGATCCTAATAATCCAGACACTGATGGAGATAAATTA
TCTGATGGACAAGAAGTTCTTTTATATCATACAAATCCATTATTAAAGGATACTGATGGAGATAGATTGACAGATTCAGA
AGAGTTATACTTATGTGATACAGATCCTTTGAAGAAAGATTCTGATGGAAATGGAATTACTGATGATTTAGAAGATCAAG
ATAAAGATACAATTACTAATTATGATGAAATTTCATTAGGAAGTAATCCAAAGTTAGCTGATTCAGATTTTGATAATTTA
ACTGATGATAAAGAATTACTTTATAAAACTAGTCTAACAGATGAAGATACAGATAATGATGGACTTACAGATGGGAATGA
AATTAAGTATGGAACAGATCCTTTAAATCCAGATAGTGATGGTGATGGGATAAAAGATGGAGATGAAGTATTTACTTCTA
ATGTAGGAGTAGGATCATTAGATAAAGATGAAAAAGTTGAGCCATCTGTTAAAATGAATTTAAAAGGAAGAAACATTGGT
ACAGTATCAATTTCTAATGTAGGAAAAGTAAATCCTTATTTAAATAAAAATATACCAGGATATATAGGGGCACCATTTGA
ATTTGCTTCACCAGAAAGATTTAATAGTGCAAAAATAACTTTTACTATAGATAAGGATTTATTTAATAAACAAGATATGA
AACCTTCTATATATTACTTTAATGAAAATACTAAATTATTAGAGTTATTGCCAAATCAGACAGTAGATGCTTCAAGTGGT
ACAATCTCTACTAATGTAAGAAGCTTTGGAACTTATATAGTATTAAATAAAAATGAAGTAGATAAAGCTTGGAATAAAGA
AATGAAAGCACCTCAGATTGAAGAAACTAGTAATGCTGGATTAAATAGAGGAGTTGCTATTAAATATAAAGGAAATATAC
AATATTATAATTCTAATAATGTAAAAAAAGATATAGTAAAGAATTTAGATAAAAATGTAGCTGAATCTAAGCTAACTTTA
GAGGAAACAATAGAACTTACTACTGACAGTGATGGCGATGGATTATCAGATTACCATGAGAAAAAAGGTTTCAAGACAAA
TATAGGATGGATATATACAGATCCTAATAATCCAGATACTGATGGAGATGGATTAAAAGATGGAGAAGAGATTCAATATT
GTAGTGATAATGGTGGATACTTCATAGTAAAATCTAATCCATTGTTATATGATAGTGATGGGGACGGTTCATCAGATAAA
TATGATGCTAATCCTATGAAATATGAATTAAGCGATAGACAACTTGCAATATTTAGCCGACTTGCATATAGTGATTTAGA
ATCATCAATAGGAAAAACCGTAAAAGAAATTAAAGATCCAAAAGACATTTTTAATACAGTTGAACTGCAAGATTGGGGCA
ATACTGAAGAAATTGGAGATTGGAAATTAATTGATGCTAAAGATGATACAAGTTATAGTAAAGCTGGCTTTGCTGCTAGT
ACATATAAACTTGGAAATAATATTATAGTTGCTTATAGAGGGTCTGAAAGCAATTTAGAATTATTATCTGATATAGCAAT
ATTATTGAATACACATCACGAAGCGGGACAAGCATATGCATATACTAAGGATGCTTTTAAGTCTAATGTTAATAGCAAAA
TGCATCTTACTGGACATTCATTAGGCGGTTTTTTAGCATTAAAAACAACTCAAAATAGTGTTAAAGAGCGTGATTCAGAG
GAAAGAAATCTATATGATAGTATTGAAAGAACTGTAAGATTTAATGCTCCTAATTATGGCATTGTATTTGGAGAAGATTC
TAAAAATTTAGAAACAATAAAGGATAAAATTATAAATTATAGAACTAAGGAGGATAAAGTATCATTGCTTCCATGGTCTT
CATTTGTTGGTGTAAAATATGAATATGCAACCCGTGATGAATTGTATAAAACAAAATATGATAAAAGCTCAATGCTAGAT
AGATATATTTTAGCTCCTCATGATATGGCTAACTTTTTATATTATTTAGAACCAAAACCAAATATATTTAAAAATTAA

Upstream 100 bases:

>100_bases
AAAACTATAATAAAAATGTGGAATAATTAACTTTTTTATTATATAATGTTAAATATATGTTAATAAAGTATTAAAATTGA
AAAATAAGGGAGGATTGCCA

Downstream 100 bases:

>100_bases
ATTATTTTATCCTATGACTAACTGCTCTAATACTCACATCTTTAAAAATTGGAGTAAAGAGCAGCTATGTCTATGGATAA
GCATTCTCCAAATTTTAGTA

Product: thrombospondin type 3 repeat-containing protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; Thrombospondin Type 3 Repeat Protein; Triacylglycerol Lipase; Thrombospondin Type 3 Repeat-Containing Protein; Mtsb Protein Involved In Cell-Cell Cohesion; AAA ATPase; YD Repeat-Containing Protein; OmpA Domain-Containing Protein; S-Layer-Like Domain-Containing Protein; Ricin B Lectin; Yd Repeat Protein; Thrombospondin Type 3 Repeat Family; IclR-Like Transcriptional Regulator; Lipoprotein; Ig Domain-Containing Protein

Number of amino acids: Translated: 825; Mature: 825

Protein sequence:

>825_residues
MKKLKKSNLKNKMKLRVLSYIMILMFLTINTEIVFAKTSSNLKTENIKILLNAHRNLGITELKWNTIEGANYQLKRGENK
DKLQVIEDNITENTFIDVNSIQDKEYYYCIIAKKDDKELYKSNVIQVKAFIDSDKDGLSDDEEKLYKTDPNNPDTDGDKL
SDGQEVLLYHTNPLLKDTDGDRLTDSEELYLCDTDPLKKDSDGNGITDDLEDQDKDTITNYDEISLGSNPKLADSDFDNL
TDDKELLYKTSLTDEDTDNDGLTDGNEIKYGTDPLNPDSDGDGIKDGDEVFTSNVGVGSLDKDEKVEPSVKMNLKGRNIG
TVSISNVGKVNPYLNKNIPGYIGAPFEFASPERFNSAKITFTIDKDLFNKQDMKPSIYYFNENTKLLELLPNQTVDASSG
TISTNVRSFGTYIVLNKNEVDKAWNKEMKAPQIEETSNAGLNRGVAIKYKGNIQYYNSNNVKKDIVKNLDKNVAESKLTL
EETIELTTDSDGDGLSDYHEKKGFKTNIGWIYTDPNNPDTDGDGLKDGEEIQYCSDNGGYFIVKSNPLLYDSDGDGSSDK
YDANPMKYELSDRQLAIFSRLAYSDLESSIGKTVKEIKDPKDIFNTVELQDWGNTEEIGDWKLIDAKDDTSYSKAGFAAS
TYKLGNNIIVAYRGSESNLELLSDIAILLNTHHEAGQAYAYTKDAFKSNVNSKMHLTGHSLGGFLALKTTQNSVKERDSE
ERNLYDSIERTVRFNAPNYGIVFGEDSKNLETIKDKIINYRTKEDKVSLLPWSSFVGVKYEYATRDELYKTKYDKSSMLD
RYILAPHDMANFLYYLEPKPNIFKN

Sequences:

>Translated_825_residues
MKKLKKSNLKNKMKLRVLSYIMILMFLTINTEIVFAKTSSNLKTENIKILLNAHRNLGITELKWNTIEGANYQLKRGENK
DKLQVIEDNITENTFIDVNSIQDKEYYYCIIAKKDDKELYKSNVIQVKAFIDSDKDGLSDDEEKLYKTDPNNPDTDGDKL
SDGQEVLLYHTNPLLKDTDGDRLTDSEELYLCDTDPLKKDSDGNGITDDLEDQDKDTITNYDEISLGSNPKLADSDFDNL
TDDKELLYKTSLTDEDTDNDGLTDGNEIKYGTDPLNPDSDGDGIKDGDEVFTSNVGVGSLDKDEKVEPSVKMNLKGRNIG
TVSISNVGKVNPYLNKNIPGYIGAPFEFASPERFNSAKITFTIDKDLFNKQDMKPSIYYFNENTKLLELLPNQTVDASSG
TISTNVRSFGTYIVLNKNEVDKAWNKEMKAPQIEETSNAGLNRGVAIKYKGNIQYYNSNNVKKDIVKNLDKNVAESKLTL
EETIELTTDSDGDGLSDYHEKKGFKTNIGWIYTDPNNPDTDGDGLKDGEEIQYCSDNGGYFIVKSNPLLYDSDGDGSSDK
YDANPMKYELSDRQLAIFSRLAYSDLESSIGKTVKEIKDPKDIFNTVELQDWGNTEEIGDWKLIDAKDDTSYSKAGFAAS
TYKLGNNIIVAYRGSESNLELLSDIAILLNTHHEAGQAYAYTKDAFKSNVNSKMHLTGHSLGGFLALKTTQNSVKERDSE
ERNLYDSIERTVRFNAPNYGIVFGEDSKNLETIKDKIINYRTKEDKVSLLPWSSFVGVKYEYATRDELYKTKYDKSSMLD
RYILAPHDMANFLYYLEPKPNIFKN
>Mature_825_residues
MKKLKKSNLKNKMKLRVLSYIMILMFLTINTEIVFAKTSSNLKTENIKILLNAHRNLGITELKWNTIEGANYQLKRGENK
DKLQVIEDNITENTFIDVNSIQDKEYYYCIIAKKDDKELYKSNVIQVKAFIDSDKDGLSDDEEKLYKTDPNNPDTDGDKL
SDGQEVLLYHTNPLLKDTDGDRLTDSEELYLCDTDPLKKDSDGNGITDDLEDQDKDTITNYDEISLGSNPKLADSDFDNL
TDDKELLYKTSLTDEDTDNDGLTDGNEIKYGTDPLNPDSDGDGIKDGDEVFTSNVGVGSLDKDEKVEPSVKMNLKGRNIG
TVSISNVGKVNPYLNKNIPGYIGAPFEFASPERFNSAKITFTIDKDLFNKQDMKPSIYYFNENTKLLELLPNQTVDASSG
TISTNVRSFGTYIVLNKNEVDKAWNKEMKAPQIEETSNAGLNRGVAIKYKGNIQYYNSNNVKKDIVKNLDKNVAESKLTL
EETIELTTDSDGDGLSDYHEKKGFKTNIGWIYTDPNNPDTDGDGLKDGEEIQYCSDNGGYFIVKSNPLLYDSDGDGSSDK
YDANPMKYELSDRQLAIFSRLAYSDLESSIGKTVKEIKDPKDIFNTVELQDWGNTEEIGDWKLIDAKDDTSYSKAGFAAS
TYKLGNNIIVAYRGSESNLELLSDIAILLNTHHEAGQAYAYTKDAFKSNVNSKMHLTGHSLGGFLALKTTQNSVKERDSE
ERNLYDSIERTVRFNAPNYGIVFGEDSKNLETIKDKIINYRTKEDKVSLLPWSSFVGVKYEYATRDELYKTKYDKSSMLD
RYILAPHDMANFLYYLEPKPNIFKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 93161; Mature: 93161

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLKKSNLKNKMKLRVLSYIMILMFLTINTEIVFAKTSSNLKTENIKILLNAHRNLGIT
CCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEECCEEEEEECCCCCCEE
ELKWNTIEGANYQLKRGENKDKLQVIEDNITENTFIDVNSIQDKEYYYCIIAKKDDKELY
EEEEEEECCCCEEEECCCCCCCEEEEECCCCCCEEEEECCCCCCCEEEEEEEECCCHHHH
KSNVIQVKAFIDSDKDGLSDDEEKLYKTDPNNPDTDGDKLSDGQEVLLYHTNPLLKDTDG
HCCEEEEEEEECCCCCCCCCCHHHHEECCCCCCCCCCCCCCCCCEEEEEECCCCEECCCC
DRLTDSEELYLCDTDPLKKDSDGNGITDDLEDQDKDTITNYDEISLGSNPKLADSDFDNL
CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC
TDDKELLYKTSLTDEDTDNDGLTDGNEIKYGTDPLNPDSDGDGIKDGDEVFTSNVGVGSL
CCCHHHEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCC
DKDEKVEPSVKMNLKGRNIGTVSISNVGKVNPYLNKNIPGYIGAPFEFASPERFNSAKIT
CCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
FTIDKDLFNKQDMKPSIYYFNENTKLLELLPNQTVDASSGTISTNVRSFGTYIVLNKNEV
EEECHHHCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCEEEECCCCCCCEEEEECCHH
DKAWNKEMKAPQIEETSNAGLNRGVAIKYKGNIQYYNSNNVKKDIVKNLDKNVAESKLTL
HHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHCCH
EETIELTTDSDGDGLSDYHEKKGFKTNIGWIYTDPNNPDTDGDGLKDGEEIQYCSDNGGY
HHEEEEEECCCCCCCHHHHHHCCCEECCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCE
FIVKSNPLLYDSDGDGSSDKYDANPMKYELSDRQLAIFSRLAYSDLESSIGKTVKEIKDP
EEEECCCEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH
KDIFNTVELQDWGNTEEIGDWKLIDAKDDTSYSKAGFAASTYKLGNNIIVAYRGSESNLE
HHHHCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCHH
LLSDIAILLNTHHEAGQAYAYTKDAFKSNVNSKMHLTGHSLGGFLALKTTQNSVKERDSE
HHHHHHHHHCCCCCCCCEEEEEHHHHHCCCCCEEEEECCCCCCEEEEEECHHHHHHCCCH
ERNLYDSIERTVRFNAPNYGIVFGEDSKNLETIKDKIINYRTKEDKVSLLPWSSFVGVKY
HHHHHHHHHHHEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCEEE
EYATRDELYKTKYDKSSMLDRYILAPHDMANFLYYLEPKPNIFKN
EECCHHHHHHHCCCHHHHHHHEEECCCCCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MKKLKKSNLKNKMKLRVLSYIMILMFLTINTEIVFAKTSSNLKTENIKILLNAHRNLGIT
CCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEECCEEEEEECCCCCCEE
ELKWNTIEGANYQLKRGENKDKLQVIEDNITENTFIDVNSIQDKEYYYCIIAKKDDKELY
EEEEEEECCCCEEEECCCCCCCEEEEECCCCCCEEEEECCCCCCCEEEEEEEECCCHHHH
KSNVIQVKAFIDSDKDGLSDDEEKLYKTDPNNPDTDGDKLSDGQEVLLYHTNPLLKDTDG
HCCEEEEEEEECCCCCCCCCCHHHHEECCCCCCCCCCCCCCCCCEEEEEECCCCEECCCC
DRLTDSEELYLCDTDPLKKDSDGNGITDDLEDQDKDTITNYDEISLGSNPKLADSDFDNL
CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC
TDDKELLYKTSLTDEDTDNDGLTDGNEIKYGTDPLNPDSDGDGIKDGDEVFTSNVGVGSL
CCCHHHEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCC
DKDEKVEPSVKMNLKGRNIGTVSISNVGKVNPYLNKNIPGYIGAPFEFASPERFNSAKIT
CCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
FTIDKDLFNKQDMKPSIYYFNENTKLLELLPNQTVDASSGTISTNVRSFGTYIVLNKNEV
EEECHHHCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCEEEECCCCCCCEEEEECCHH
DKAWNKEMKAPQIEETSNAGLNRGVAIKYKGNIQYYNSNNVKKDIVKNLDKNVAESKLTL
HHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHCCH
EETIELTTDSDGDGLSDYHEKKGFKTNIGWIYTDPNNPDTDGDGLKDGEEIQYCSDNGGY
HHEEEEEECCCCCCCHHHHHHCCCEECCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCE
FIVKSNPLLYDSDGDGSSDKYDANPMKYELSDRQLAIFSRLAYSDLESSIGKTVKEIKDP
EEEECCCEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH
KDIFNTVELQDWGNTEEIGDWKLIDAKDDTSYSKAGFAASTYKLGNNIIVAYRGSESNLE
HHHHCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCHH
LLSDIAILLNTHHEAGQAYAYTKDAFKSNVNSKMHLTGHSLGGFLALKTTQNSVKERDSE
HHHHHHHHHCCCCCCCCEEEEEHHHHHCCCCCEEEEECCCCCCEEEEEECHHHHHHCCCH
ERNLYDSIERTVRFNAPNYGIVFGEDSKNLETIKDKIINYRTKEDKVSLLPWSSFVGVKY
HHHHHHHHHHHEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCEEE
EYATRDELYKTKYDKSSMLDRYILAPHDMANFLYYLEPKPNIFKN
EECCHHHHHHHCCCHHHHHHHEEECCCCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA