Click here to switch to the map view.

The map label for this gene is atpF [H]

Identifier: 153936231

GI number: 153936231

Start: 2626292

End: 2626600

Strand: Reverse

Name: atpF [H]

Synonym: CLC_2499

Alternate gene names: 153936231

Gene position: 2626600-2626292 (Counterclockwise)

Preceding gene: 153935461

Following gene: 153936651

Centisome position: 69.85

GC content: 30.42

Gene sequence:

>309_bases
ATGTTTAAAATAGGAGTTGTTGGAGATAAAGATTCTATTCTAGCTTTTAAAGCTTTGGGTATAGATGTATATCCAGTAGT
TGGACCAGAAGAGGGAAAACGAACTATTGATAAAATGGCTGCGGAAAAATATGCTATTATATTTGTTACAGAACAAATAG
CTAAGGATTTAGAAGAAACTATTGAGAGATATAATAGAGAATTAATTCCTGCCGTTATACTTATTCCTAGTAATCAGGGC
TCTCTAAATATTGGTATGAAGAGAATAAATGATAATGTGGAAAAAGCAGTTGGTGTTAATATTTTATAA

Upstream 100 bases:

>100_bases
ATTGGAAAAGAAACTGAAATAAAGGTCTTAAGAATTATAATGATAGGTAAATTAAATAGCGTAGCACCAGAAGTTATAAG
AGAAAGGCTGCGTGATATAT

Downstream 100 bases:

>100_bases
GGAAGGTAGGTAGGTGAACTTGAAGACAGGACGTGTTTTAAAGATATCTGGACCTTTAGTTGTTGCTGAAGGAATGGAAG
AGGCAAACATATATGACGTT

Product: V-type ATP synthase subunit F

Products: ADP; phosphate; H+

Alternate protein names: V-ATPase subunit F [H]

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MFKIGVVGDKDSILAFKALGIDVYPVVGPEEGKRTIDKMAAEKYAIIFVTEQIAKDLEETIERYNRELIPAVILIPSNQG
SLNIGMKRINDNVEKAVGVNIL

Sequences:

>Translated_102_residues
MFKIGVVGDKDSILAFKALGIDVYPVVGPEEGKRTIDKMAAEKYAIIFVTEQIAKDLEETIERYNRELIPAVILIPSNQG
SLNIGMKRINDNVEKAVGVNIL
>Mature_102_residues
MFKIGVVGDKDSILAFKALGIDVYPVVGPEEGKRTIDKMAAEKYAIIFVTEQIAKDLEETIERYNRELIPAVILIPSNQG
SLNIGMKRINDNVEKAVGVNIL

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane [H]

COG id: COG1436

COG function: function code C; Archaeal/vacuolar-type H+-ATPase subunit F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the V-ATPase F subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022944
- InterPro:   IPR008218 [H]

Pfam domain/function: PF01990 ATP-synt_F [H]

EC number: 3.6.3.14

Molecular weight: Translated: 11260; Mature: 11260

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKIGVVGDKDSILAFKALGIDVYPVVGPEEGKRTIDKMAAEKYAIIFVTEQIAKDLEET
CEEEEECCCCCCEEEEEECCEEEEECCCCCCHHHHHHHHHHCCEEEEEEEHHHHHHHHHH
IERYNRELIPAVILIPSNQGSLNIGMKRINDNVEKAVGVNIL
HHHHCCCCCCEEEEEECCCCCEEEHHHHHCCCHHHHCCCCCC
>Mature Secondary Structure
MFKIGVVGDKDSILAFKALGIDVYPVVGPEEGKRTIDKMAAEKYAIIFVTEQIAKDLEET
CEEEEECCCCCCEEEEEECCEEEEECCCCCCHHHHHHHHHHCCEEEEEEEHHHHHHHHHH
IERYNRELIPAVILIPSNQGSLNIGMKRINDNVEKAVGVNIL
HHHHCCCCCCEEEEEECCCCCEEEHHHHHCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA