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The map label for this gene is cstA [H]

Identifier: 153936112

GI number: 153936112

Start: 619494

End: 621137

Strand: Direct

Name: cstA [H]

Synonym: CLC_0607

Alternate gene names: 153936112

Gene position: 619494-621137 (Clockwise)

Preceding gene: 153936925

Following gene: 153935071

Centisome position: 16.47

GC content: 33.21

Gene sequence:

>1644_bases
ATGAACTCAGTAGTATTACTCTTAAGTGGTATTATTTTATTTTTGATTGCTTATCTAACTTATGGTAGATGGCTTGCAAA
ACATTGGGGTATAGATATAAGCAAGCAAACGCCAGCTCATACTAAATTTGATAATGTAGACTATTGTCCAGCAGATGCAA
AAATTTTATTAGGTCACCATTTCTCATCCATCGCAGGGGCAGGACCTATAGCAGGACCTATACAAGCAGCTATATTTGGA
TGGGTTCCTGTAATGCTATGGATTGTTATAGGAAGTATTTTTATAGGTGGCGTTCATGATTTTGGTTCTTTATTTGCATC
TATAAGACATGGAGGAAACTCTATAGGAGAGATAATTCGTGTTAATATAGGTGAAAAGGGAAAAAAACTATTTAATGTTT
TTGCTTGGGTTACATTAGTTCTAGTTGTAGCAGCTTTTACAGATATTTGTGCTTCTACTTTTGCATATAGTCCACAAACA
CCAGAACTTTTAACAGGAGCACGTTCTGGAACAGCATCAATTCTCTTTATATTTTTAGCGATGGGGTTTGGATTTTTTGT
ATATAGAAGAAATGCTCCGGTAGGATTGTCTACAGTAGTGGGGGTTGCTTTGTTATTTTTCTGCATATATATAGGATATA
GATTTCCAGTATTAAAATTAAGTAAGTTTCAATGGCAAATAATACTTTTAATATATATTACTGCAGCATCTACTATGCCA
GTTTGGCTACTTCTTCAGCCAAGAGATTATCTTTGCTCATTTTTGTTGTATGCTATGCTTATAGGAGCTTTTATAGGTAT
ATTAGTTCTTCATCCAACAATGCAATTAGCACCAACCACATCATTTACAGTAAAAGGTCAAACTTTATTCCCATTCTTAT
TTGTAACAGTAGCTTGTGGAGCGGTTTCAGGATTTCATTCTTTAGTAAGCTCAGGAACATCATCAAAACAATTAAATAGT
GAAAAGGATACTCAACTTATAGGATATGGTTCCATGTTAATTGAAGGAGTTGTAGCTATTATAGCTTTAATTGCTGTAGG
ATATGTTGCTAAGGCTAAAGGTACACCAGCTGAAATTTTTGCTAACAGTTGTGCAACCTTTATGAATTCCTTTGGAATAC
CATTAGCTATAGGTAAAGTATTCGTAACATTATCCTTCTCTGCCTTTGCTTTAACAAGCTTGGATACAGCCACAAGGATA
GGAAGATATATATTCCAAGAATTTTTCCAAGGGTCTAGTGAAAAACAGGGAGAAAAGAAGTCTATATTTACTAATATGTA
TGTATCAACATTAATAACAGTATTTTGCGCATTAGGACTAATATTATATGGTTATGAAAAAATATGGCCTATATTTGGGT
CAGCAAACCAGTTGTTAGCTGCATTAGCTTTATTATCTTTAACAGCATGGCTTGCGAGAAGAGGGAAAAAGACAATAATG
ATAATAATACCAATGATATTCATGTTTGCAGTAACACTATCTGCACTATTCTTAATAATAAAATCCTATTTGTTTGGAGC
AAATCCAAATTATATATTAGGAATAATGGCAGTAATATTGCTTGTATTGGCTATAGTACTTGCAGTAGAGGCATATAATA
CATTAAATAAAAACAAAAAGGCTAATACAAATTTAGGAGCTTAG

Upstream 100 bases:

>100_bases
TTTGATAGATTTAAAAAATAATGAAGTTACAACTAACAAAGCCGGTAAGTTTGTTAAAAAGGTGTATCAAAAACACTTTA
ATAAAAATTAAGGGGTTTTT

Downstream 100 bases:

>100_bases
TAAATATATAACTTTAATAAAATAATAATTAAATTATCCCTATACAAATTATAAGACTTCAGTAGAATATTAGGTCAAAA
TTATGACAATTTACCTAAGT

Product: carbon starvation protein CstA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 547; Mature: 547

Protein sequence:

>547_residues
MNSVVLLLSGIILFLIAYLTYGRWLAKHWGIDISKQTPAHTKFDNVDYCPADAKILLGHHFSSIAGAGPIAGPIQAAIFG
WVPVMLWIVIGSIFIGGVHDFGSLFASIRHGGNSIGEIIRVNIGEKGKKLFNVFAWVTLVLVVAAFTDICASTFAYSPQT
PELLTGARSGTASILFIFLAMGFGFFVYRRNAPVGLSTVVGVALLFFCIYIGYRFPVLKLSKFQWQIILLIYITAASTMP
VWLLLQPRDYLCSFLLYAMLIGAFIGILVLHPTMQLAPTTSFTVKGQTLFPFLFVTVACGAVSGFHSLVSSGTSSKQLNS
EKDTQLIGYGSMLIEGVVAIIALIAVGYVAKAKGTPAEIFANSCATFMNSFGIPLAIGKVFVTLSFSAFALTSLDTATRI
GRYIFQEFFQGSSEKQGEKKSIFTNMYVSTLITVFCALGLILYGYEKIWPIFGSANQLLAALALLSLTAWLARRGKKTIM
IIIPMIFMFAVTLSALFLIIKSYLFGANPNYILGIMAVILLVLAIVLAVEAYNTLNKNKKANTNLGA

Sequences:

>Translated_547_residues
MNSVVLLLSGIILFLIAYLTYGRWLAKHWGIDISKQTPAHTKFDNVDYCPADAKILLGHHFSSIAGAGPIAGPIQAAIFG
WVPVMLWIVIGSIFIGGVHDFGSLFASIRHGGNSIGEIIRVNIGEKGKKLFNVFAWVTLVLVVAAFTDICASTFAYSPQT
PELLTGARSGTASILFIFLAMGFGFFVYRRNAPVGLSTVVGVALLFFCIYIGYRFPVLKLSKFQWQIILLIYITAASTMP
VWLLLQPRDYLCSFLLYAMLIGAFIGILVLHPTMQLAPTTSFTVKGQTLFPFLFVTVACGAVSGFHSLVSSGTSSKQLNS
EKDTQLIGYGSMLIEGVVAIIALIAVGYVAKAKGTPAEIFANSCATFMNSFGIPLAIGKVFVTLSFSAFALTSLDTATRI
GRYIFQEFFQGSSEKQGEKKSIFTNMYVSTLITVFCALGLILYGYEKIWPIFGSANQLLAALALLSLTAWLARRGKKTIM
IIIPMIFMFAVTLSALFLIIKSYLFGANPNYILGIMAVILLVLAIVLAVEAYNTLNKNKKANTNLGA
>Mature_547_residues
MNSVVLLLSGIILFLIAYLTYGRWLAKHWGIDISKQTPAHTKFDNVDYCPADAKILLGHHFSSIAGAGPIAGPIQAAIFG
WVPVMLWIVIGSIFIGGVHDFGSLFASIRHGGNSIGEIIRVNIGEKGKKLFNVFAWVTLVLVVAAFTDICASTFAYSPQT
PELLTGARSGTASILFIFLAMGFGFFVYRRNAPVGLSTVVGVALLFFCIYIGYRFPVLKLSKFQWQIILLIYITAASTMP
VWLLLQPRDYLCSFLLYAMLIGAFIGILVLHPTMQLAPTTSFTVKGQTLFPFLFVTVACGAVSGFHSLVSSGTSSKQLNS
EKDTQLIGYGSMLIEGVVAIIALIAVGYVAKAKGTPAEIFANSCATFMNSFGIPLAIGKVFVTLSFSAFALTSLDTATRI
GRYIFQEFFQGSSEKQGEKKSIFTNMYVSTLITVFCALGLILYGYEKIWPIFGSANQLLAALALLSLTAWLARRGKKTIM
IIIPMIFMFAVTLSALFLIIKSYLFGANPNYILGIMAVILLVLAIVLAVEAYNTLNKNKKANTNLGA

Specific function: Peptide Utilization During Carbon Starvation. [C]

COG id: COG1966

COG function: function code T; Carbon starvation protein, predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CstA family [H]

Homologues:

Organism=Escherichia coli, GI1786814, Length=575, Percent_Identity=31.4782608695652, Blast_Score=260, Evalue=2e-70,
Organism=Escherichia coli, GI87082431, Length=354, Percent_Identity=37.0056497175141, Blast_Score=215, Evalue=7e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003706 [H]

Pfam domain/function: PF02554 CstA [H]

EC number: NA

Molecular weight: Translated: 59382; Mature: 59382

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSVVLLLSGIILFLIAYLTYGRWLAKHWGIDISKQTPAHTKFDNVDYCPADAKILLGHH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
FSSIAGAGPIAGPIQAAIFGWVPVMLWIVIGSIFIGGVHDFGSLFASIRHGGNSIGEIIR
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHEEE
VNIGEKGKKLFNVFAWVTLVLVVAAFTDICASTFAYSPQTPELLTGARSGTASILFIFLA
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHH
MGFGFFVYRRNAPVGLSTVVGVALLFFCIYIGYRFPVLKLSKFQWQIILLIYITAASTMP
HHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
VWLLLQPRDYLCSFLLYAMLIGAFIGILVLHPTMQLAPTTSFTVKGQTLFPFLFVTVACG
EEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCEEEECCCHHHHHHHHHHHHH
AVSGFHSLVSSGTSSKQLNSEKDTQLIGYGSMLIEGVVAIIALIAVGYVAKAKGTPAEIF
HHHHHHHHHHCCCCCHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
ANSCATFMNSFGIPLAIGKVFVTLSFSAFALTSLDTATRIGRYIFQEFFQGSSEKQGEKK
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
SIFTNMYVSTLITVFCALGLILYGYEKIWPIFGSANQLLAALALLSLTAWLARRGKKTIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEE
IIIPMIFMFAVTLSALFLIIKSYLFGANPNYILGIMAVILLVLAIVLAVEAYNTLNKNKK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ANTNLGA
CCCCCCC
>Mature Secondary Structure
MNSVVLLLSGIILFLIAYLTYGRWLAKHWGIDISKQTPAHTKFDNVDYCPADAKILLGHH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
FSSIAGAGPIAGPIQAAIFGWVPVMLWIVIGSIFIGGVHDFGSLFASIRHGGNSIGEIIR
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHEEE
VNIGEKGKKLFNVFAWVTLVLVVAAFTDICASTFAYSPQTPELLTGARSGTASILFIFLA
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHH
MGFGFFVYRRNAPVGLSTVVGVALLFFCIYIGYRFPVLKLSKFQWQIILLIYITAASTMP
HHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
VWLLLQPRDYLCSFLLYAMLIGAFIGILVLHPTMQLAPTTSFTVKGQTLFPFLFVTVACG
EEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCEEEECCCHHHHHHHHHHHHH
AVSGFHSLVSSGTSSKQLNSEKDTQLIGYGSMLIEGVVAIIALIAVGYVAKAKGTPAEIF
HHHHHHHHHHCCCCCHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
ANSCATFMNSFGIPLAIGKVFVTLSFSAFALTSLDTATRIGRYIFQEFFQGSSEKQGEKK
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
SIFTNMYVSTLITVFCALGLILYGYEKIWPIFGSANQLLAALALLSLTAWLARRGKKTIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEE
IIIPMIFMFAVTLSALFLIIKSYLFGANPNYILGIMAVILLVLAIVLAVEAYNTLNKNKK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ANTNLGA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]