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The map label for this gene is 153935835

Identifier: 153935835

GI number: 153935835

Start: 1056786

End: 1057100

Strand: Direct

Name: 153935835

Synonym: CLC_1040

Alternate gene names: NA

Gene position: 1056786-1057100 (Clockwise)

Preceding gene: 153935094

Following gene: 153935079

Centisome position: 28.1

GC content: 26.98

Gene sequence:

>315_bases
ATGAATATAAATAAAAATTTACCATTAACAGAAACAACTTATTATATTCTTTTAGCATTATTAGAACCTGGTTATGGATA
TATTATAATGGAAAAAGTTGAAGAATTAAGTAATTATCAAGTTAAGATAGCAGCGGGAACACTTTATGGAGCCATTGAAA
ATTTATTGAAACAAAAATTGATAAAATTTGTGGGTACAGAAGATAACAGGCGAAAAGTTTATGTGATTACTGAAAAGGGA
AAAGAAGTTTTGCTTTTGGACATTGAAAGAATGCGTCATATGATTAACATAGCAGAAAGTAACTTTAAATTATGA

Upstream 100 bases:

>100_bases
TCATAAAGCTTTTTTAATATTGACATATACAGTTAAACTGTATATAGTAAAAATGTATAGTTTAACTGTATACTTGAAAA
ATGTATAATTGGAGGAATTT

Downstream 100 bases:

>100_bases
TTTAGGAGGAATTAACATGAGGAAATTTAGGCTTTTTACTGATTATAATAAAGAAGAAAAATGGTTAAATGAAATGTATA
AAAAGGGTTATGAATTGAAA

Product: PadR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator PadR-Like Family; Transcriptional Regulator PadR Family; Transcriptional Regulator PadR Family Protein; PadR-Like Family Transcriptional Regulator; Transcriptional Regulator; PadR Family Regulatory Protein

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MNINKNLPLTETTYYILLALLEPGYGYIIMEKVEELSNYQVKIAAGTLYGAIENLLKQKLIKFVGTEDNRRKVYVITEKG
KEVLLLDIERMRHMINIAESNFKL

Sequences:

>Translated_104_residues
MNINKNLPLTETTYYILLALLEPGYGYIIMEKVEELSNYQVKIAAGTLYGAIENLLKQKLIKFVGTEDNRRKVYVITEKG
KEVLLLDIERMRHMINIAESNFKL
>Mature_104_residues
MNINKNLPLTETTYYILLALLEPGYGYIIMEKVEELSNYQVKIAAGTLYGAIENLLKQKLIKFVGTEDNRRKVYVITEKG
KEVLLLDIERMRHMINIAESNFKL

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12052; Mature: 12052

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINKNLPLTETTYYILLALLEPGYGYIIMEKVEELSNYQVKIAAGTLYGAIENLLKQKL
CCCCCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHH
IKFVGTEDNRRKVYVITEKGKEVLLLDIERMRHMINIAESNFKL
HHHHCCCCCCEEEEEEECCCCEEEEEEHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNINKNLPLTETTYYILLALLEPGYGYIIMEKVEELSNYQVKIAAGTLYGAIENLLKQKL
CCCCCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHH
IKFVGTEDNRRKVYVITEKGKEVLLLDIERMRHMINIAESNFKL
HHHHCCCCCCEEEEEEECCCCEEEEEEHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA