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The map label for this gene is yoaR [H]

Identifier: 153935793

GI number: 153935793

Start: 245812

End: 246948

Strand: Direct

Name: yoaR [H]

Synonym: CLC_0270

Alternate gene names: 153935793

Gene position: 245812-246948 (Clockwise)

Preceding gene: 153937822

Following gene: 153935023

Centisome position: 6.54

GC content: 28.5

Gene sequence:

>1137_bases
TTGGTTAGGTCAAGAAAAGATAGAAGAAAGAAAGAATCAAAACCAATGAAAATAGCATTAATTACTTTATCAGTTGTAAT
ATTGCTAACGTTATCCGCTTTTACAACATATCAATATAATAATATAAAATATTATAATAATTTAATTTATCCGGGGGTTT
CTGTAGAAGGTGTAGATTTATCTGGCAAAACTAAAGAGGAAGCGAAAAAGATTGTACAAGAAAAGTATTGGAATAAATTA
CTGAGTAAGAATATTAATGTGAAAGCTAAAGATAAGACCTATACATTAAAGTATTCTGATTTAAAACCTACAAGTAATTT
AGACAATGTATTAAAAGATGCAGAAGCTTATGGGAAAAATCTAATAATTTTTAAAAGATATAGTTTGATAAAAAATAAAA
CTTCTAAAAATTATTCTATAAATTTTAAATATGATAAGAAGGTAATAGAATCATTAATGAGTAAAATAGAAAAGGATGTG
AATATAAGTCCTATAGATGCATCTTTAGCTTCAAATGGAGGTGGCTTTAGTGTTATATCTCATAAAAACGGAGAAAAACT
AGATAAAGATAAATTAAAGAAAGATTTGATCCCTAAAATAAATAATGATATATCTAGTGATATAACAGAAAAAGCTGTAA
TGAAAACAGTGACGCCTAGAATTACAGAAGATAAGCTACAGGGGGTAGGTAGAATGATAGGATCTTATTCAAGTCATTAT
GGATCTATATCTTCATCTCAAAGGGCAAATAATATAGTTACATCTACAAGTGCCATAAATGGTAAAATATTAATGCCAGG
AGATGTGTTTAGTTTTAATGGTGTTGTAGGTGAGAGAACAGCAGAAAAGGGGTATCAAGCAGCACCAATTATAGTAGGTG
AAAAAATGGAAAATGGATTAGGTGGGGGAGTATGTCAAGTTTCTTCAACTTTATTCAACGCTGTGGCAGGCTCAAAATTA
CAATCTATAGAAAGATCTCATCATACTAAACCAGTGCATTATGTACCACAAGGTATGGATGCTACTGTAGATTATGGAAA
TATAGATTATAAATTTAGAAATAATTTACAAAGTCCTATTTATATAGAGGCTTATACAAGCAATGGTAATGTAGTATTTA
ATCTTTATTCAAAATAA

Upstream 100 bases:

>100_bases
TTTAGTATTTTAAAATATTCATTAGAAAGAACTTATTAATTTATAGGAAATTTATGTCTTTTGTAGTATAATATTTATGG
ACTTTAAAGGGGTGATATAT

Downstream 100 bases:

>100_bases
TAGTACTTATAAATTAATTAATAACAAAATTAAGTTTTTAGAACAAGCCCTCTTAAAATAGATTTAGTTTTATTTTGAGA
GGGTTTATTTTATACAAATT

Product: vanW-like family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MVRSRKDRRKKESKPMKIALITLSVVILLTLSAFTTYQYNNIKYYNNLIYPGVSVEGVDLSGKTKEEAKKIVQEKYWNKL
LSKNINVKAKDKTYTLKYSDLKPTSNLDNVLKDAEAYGKNLIIFKRYSLIKNKTSKNYSINFKYDKKVIESLMSKIEKDV
NISPIDASLASNGGGFSVISHKNGEKLDKDKLKKDLIPKINNDISSDITEKAVMKTVTPRITEDKLQGVGRMIGSYSSHY
GSISSSQRANNIVTSTSAINGKILMPGDVFSFNGVVGERTAEKGYQAAPIIVGEKMENGLGGGVCQVSSTLFNAVAGSKL
QSIERSHHTKPVHYVPQGMDATVDYGNIDYKFRNNLQSPIYIEAYTSNGNVVFNLYSK

Sequences:

>Translated_378_residues
MVRSRKDRRKKESKPMKIALITLSVVILLTLSAFTTYQYNNIKYYNNLIYPGVSVEGVDLSGKTKEEAKKIVQEKYWNKL
LSKNINVKAKDKTYTLKYSDLKPTSNLDNVLKDAEAYGKNLIIFKRYSLIKNKTSKNYSINFKYDKKVIESLMSKIEKDV
NISPIDASLASNGGGFSVISHKNGEKLDKDKLKKDLIPKINNDISSDITEKAVMKTVTPRITEDKLQGVGRMIGSYSSHY
GSISSSQRANNIVTSTSAINGKILMPGDVFSFNGVVGERTAEKGYQAAPIIVGEKMENGLGGGVCQVSSTLFNAVAGSKL
QSIERSHHTKPVHYVPQGMDATVDYGNIDYKFRNNLQSPIYIEAYTSNGNVVFNLYSK
>Mature_378_residues
MVRSRKDRRKKESKPMKIALITLSVVILLTLSAFTTYQYNNIKYYNNLIYPGVSVEGVDLSGKTKEEAKKIVQEKYWNKL
LSKNINVKAKDKTYTLKYSDLKPTSNLDNVLKDAEAYGKNLIIFKRYSLIKNKTSKNYSINFKYDKKVIESLMSKIEKDV
NISPIDASLASNGGGFSVISHKNGEKLDKDKLKKDLIPKINNDISSDITEKAVMKTVTPRITEDKLQGVGRMIGSYSSHY
GSISSSQRANNIVTSTSAINGKILMPGDVFSFNGVVGERTAEKGYQAAPIIVGEKMENGLGGGVCQVSSTLFNAVAGSKL
QSIERSHHTKPVHYVPQGMDATVDYGNIDYKFRNNLQSPIYIEAYTSNGNVVFNLYSK

Specific function: Unknown

COG id: COG2720

COG function: function code V; Uncharacterized vancomycin resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022029
- InterPro:   IPR007391 [H]

Pfam domain/function: PF12229 PG_binding_4; PF04294 VanW [H]

EC number: NA

Molecular weight: Translated: 42068; Mature: 42068

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: PS00063 ALDOKETO_REDUCTASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRSRKDRRKKESKPMKIALITLSVVILLTLSAFTTYQYNNIKYYNNLIYPGVSVEGVDL
CCCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHEEEECCEEEECCEECCCCEEEECCC
SGKTKEEAKKIVQEKYWNKLLSKNINVKAKDKTYTLKYSDLKPTSNLDNVLKDAEAYGKN
CCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEECCCCCCCHHHHHHHHHHHHCCE
LIIFKRYSLIKNKTSKNYSINFKYDKKVIESLMSKIEKDVNISPIDASLASNGGGFSVIS
EEEEEHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEEEEE
HKNGEKLDKDKLKKDLIPKINNDISSDITEKAVMKTVTPRITEDKLQGVGRMIGSYSSHY
CCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC
GSISSSQRANNIVTSTSAINGKILMPGDVFSFNGVVGERTAEKGYQAAPIIVGEKMENGL
CCCCCCHHCCCEEEECCCCCCEEEECCCCEECCCCCCCHHHHCCCCCCCEEECCHHCCCC
GGGVCQVSSTLFNAVAGSKLQSIERSHHTKPVHYVPQGMDATVDYGNIDYKFRNNLQSPI
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEECCCCCCHHHCCCCCCE
YIEAYTSNGNVVFNLYSK
EEEEEECCCCEEEEEECC
>Mature Secondary Structure
MVRSRKDRRKKESKPMKIALITLSVVILLTLSAFTTYQYNNIKYYNNLIYPGVSVEGVDL
CCCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHEEEECCEEEECCEECCCCEEEECCC
SGKTKEEAKKIVQEKYWNKLLSKNINVKAKDKTYTLKYSDLKPTSNLDNVLKDAEAYGKN
CCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEECCCCCCCHHHHHHHHHHHHCCE
LIIFKRYSLIKNKTSKNYSINFKYDKKVIESLMSKIEKDVNISPIDASLASNGGGFSVIS
EEEEEHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEEEEE
HKNGEKLDKDKLKKDLIPKINNDISSDITEKAVMKTVTPRITEDKLQGVGRMIGSYSSHY
CCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC
GSISSSQRANNIVTSTSAINGKILMPGDVFSFNGVVGERTAEKGYQAAPIIVGEKMENGL
CCCCCCHHCCCEEEECCCCCCEEEECCCCEECCCCCCCHHHHCCCCCCCEEECCHHCCCC
GGGVCQVSSTLFNAVAGSKLQSIERSHHTKPVHYVPQGMDATVDYGNIDYKFRNNLQSPI
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEECCCCCCHHHCCCCCCE
YIEAYTSNGNVVFNLYSK
EEEEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]