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The map label for this gene is ydiF [H]

Identifier: 153935736

GI number: 153935736

Start: 3391300

End: 3393222

Strand: Direct

Name: ydiF [H]

Synonym: CLC_3249

Alternate gene names: 153935736

Gene position: 3391300-3393222 (Clockwise)

Preceding gene: 153934762

Following gene: 153936598

Centisome position: 90.18

GC content: 26.26

Gene sequence:

>1923_bases
ATGGTTGTATTAAGTTGTAAAAACATTTCAAAAGCTTATGGTGTTGATTTGATTTTAGATAATTTAACATTTAACATAAA
TGAACATGATAAAGTTGGTTTAATAGGTGCCAATGGTGCTGGTAAATCCACTTTATTTAAAATTCTTACTTCTTCTTTAG
AGCAGGATAGCGGAGATATTTTTATAGATAAATCTAAATCTTTAGGGTATCTTGCTCAACATCTCTCCTTAGATTCTAAT
AATACTATTTATGAAGAAGTGTTAGATGTTTTTCATGATCTTATAAAAATGGAAGAAAAACTAAATAAATTAGAAAAATT
AATGAATGAACCCTATGATAAAAACAATAAAGAATATCATGATAAAATCATAAAAGATTATACTACCTATACAGATTTAT
ATATAAATAGAGGTGGTTATACTTATAAAGGTGAAATTCATCGAGTACTAAGGGGTTTAAGTTTTGAAGAAGAAGATTTT
AATAAACAAATAAATATATTAAGTGGTGGTCAAAAAACTAGAGTAGCCCTTTGTAAGCTCTTACTTCAAAGCCCAAATAT
ATTGCTTCTAGATGAGCCTACAAATCATTTAGACTTAACAGCTATAAATTGGTTAGAAGAATATTTAAAAGCCTATAAAG
GTACCGTACTGATTATATCTCATGATAGATATTTTTTAGATGAAATTACAAACCAAACCTTTGAACTTATAAGCGGTCAT
ATAAATTGTTATAATGGTAACTACTCTAAATTTATAGAACTTAGAAAAAAAGAGTATGAAGTAAAATTAAAAGCATATAA
TCTTCAGCAAGCTGAAATTAAAAGACAAGAGAAAATAATAGAAAAATATAGATCTTTTAATAGAGAAAAAAGCATAAAAG
CAGCTGAAAGCAGACAAAAATCTTTAGATAAAATTGAAAAAATAGACGCTCCAGATAAATTACCTAAACCTGTAAAAATA
AGTTTTGAAACTCAAATAAAAAGCGGAAATGATATACTTCACGTAGAAAATCTAAGCAAAAGTTATGGAGATATGACTTT
GTTTGAAAATGTCGAAATGGATATAAAAAGAGGAGAAAAAATCGCTTTAATTGGAGATAATGGTAGAGGTAAAACCACGT
TATTTAAAATAATAATGGATGAAATTCAAAGCAACTCTGGAACAAAATATATAGGTAAAAATGTATTCATTGGCTATTAT
GATCAAGAACAATCTGACTTAAATGAGTGTAATACTGTATTAGATGAGGTTTGGGATGAGTTTCCTGAAATGACTACTAC
AGAAGTTAGAAATGCTTTAGCCGCATTTTTGTTTACTGGAGATGATGTATTTAAAGAAATATCTAAACTTAGTGGTGGAG
AAAAATGTAAAGTTAATTTATTAAAATTAATGCTTTCTAAATCTAATTTTCTTCTTTTAGATGAGCCTACTAACCATTTA
GATATAATGTCTCGTGAAGCTTTAGAAGATTCCTTATTAAATTACGATGGTACAGTTTTAGTTATATCTCACGATAGATA
TTTTCTAAATAAGGTTATAGGAAAAATCTATGAACTAAATATAGATGGTATAAAAGAATATTTAGGTAATTATGATTATT
ATATTCATAAAAAAATTAATCCTAATAGATTTGACTATGAAGCTATAACCTCTGAAAATTCAAAAACTAAAACTCAAATA
CATCAAGAAAGAAAAAAGAAAAAAGAAGAAGAAAAAAAACTAAAACAAGAAAAGCTTAAAATGAAAAATTTGGAAAAGGA
AATAACAGACCTAGAAAAAGTAGTAAATTCCCTTCAAGAGCAACTTTGTCTTGAAGAAGTATATTCAGATTCTACTAAAA
GTGAAAAAATAAATAAAGATATAATAAATAAGCAAAAATTAATAGAAGACCTTTATTCAGAGTGGGAAAACTTTATGGAA
TAG

Upstream 100 bases:

>100_bases
TATTATATTATTGAAGTAAAAAAATCAAATCTACCTATATAATACTACAAAAAAAATGCAATACATAGTAAAATAGTACT
TGTTAAGGATGGTGAAATTA

Downstream 100 bases:

>100_bases
TATTTCTTAAAATAAATTTAGTTTTAACACCGCAAAGATAAAAAATACACGTAATAAACATATGAATAAGCTTTAGTAGT
TTTTAATCTGGCATAATTTA

Product: putative drug resistance ABC transporter, ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 640; Mature: 640

Protein sequence:

>640_residues
MVVLSCKNISKAYGVDLILDNLTFNINEHDKVGLIGANGAGKSTLFKILTSSLEQDSGDIFIDKSKSLGYLAQHLSLDSN
NTIYEEVLDVFHDLIKMEEKLNKLEKLMNEPYDKNNKEYHDKIIKDYTTYTDLYINRGGYTYKGEIHRVLRGLSFEEEDF
NKQINILSGGQKTRVALCKLLLQSPNILLLDEPTNHLDLTAINWLEEYLKAYKGTVLIISHDRYFLDEITNQTFELISGH
INCYNGNYSKFIELRKKEYEVKLKAYNLQQAEIKRQEKIIEKYRSFNREKSIKAAESRQKSLDKIEKIDAPDKLPKPVKI
SFETQIKSGNDILHVENLSKSYGDMTLFENVEMDIKRGEKIALIGDNGRGKTTLFKIIMDEIQSNSGTKYIGKNVFIGYY
DQEQSDLNECNTVLDEVWDEFPEMTTTEVRNALAAFLFTGDDVFKEISKLSGGEKCKVNLLKLMLSKSNFLLLDEPTNHL
DIMSREALEDSLLNYDGTVLVISHDRYFLNKVIGKIYELNIDGIKEYLGNYDYYIHKKINPNRFDYEAITSENSKTKTQI
HQERKKKKEEEKKLKQEKLKMKNLEKEITDLEKVVNSLQEQLCLEEVYSDSTKSEKINKDIINKQKLIEDLYSEWENFME

Sequences:

>Translated_640_residues
MVVLSCKNISKAYGVDLILDNLTFNINEHDKVGLIGANGAGKSTLFKILTSSLEQDSGDIFIDKSKSLGYLAQHLSLDSN
NTIYEEVLDVFHDLIKMEEKLNKLEKLMNEPYDKNNKEYHDKIIKDYTTYTDLYINRGGYTYKGEIHRVLRGLSFEEEDF
NKQINILSGGQKTRVALCKLLLQSPNILLLDEPTNHLDLTAINWLEEYLKAYKGTVLIISHDRYFLDEITNQTFELISGH
INCYNGNYSKFIELRKKEYEVKLKAYNLQQAEIKRQEKIIEKYRSFNREKSIKAAESRQKSLDKIEKIDAPDKLPKPVKI
SFETQIKSGNDILHVENLSKSYGDMTLFENVEMDIKRGEKIALIGDNGRGKTTLFKIIMDEIQSNSGTKYIGKNVFIGYY
DQEQSDLNECNTVLDEVWDEFPEMTTTEVRNALAAFLFTGDDVFKEISKLSGGEKCKVNLLKLMLSKSNFLLLDEPTNHL
DIMSREALEDSLLNYDGTVLVISHDRYFLNKVIGKIYELNIDGIKEYLGNYDYYIHKKINPNRFDYEAITSENSKTKTQI
HQERKKKKEEEKKLKQEKLKMKNLEKEITDLEKVVNSLQEQLCLEEVYSDSTKSEKINKDIINKQKLIEDLYSEWENFME
>Mature_640_residues
MVVLSCKNISKAYGVDLILDNLTFNINEHDKVGLIGANGAGKSTLFKILTSSLEQDSGDIFIDKSKSLGYLAQHLSLDSN
NTIYEEVLDVFHDLIKMEEKLNKLEKLMNEPYDKNNKEYHDKIIKDYTTYTDLYINRGGYTYKGEIHRVLRGLSFEEEDF
NKQINILSGGQKTRVALCKLLLQSPNILLLDEPTNHLDLTAINWLEEYLKAYKGTVLIISHDRYFLDEITNQTFELISGH
INCYNGNYSKFIELRKKEYEVKLKAYNLQQAEIKRQEKIIEKYRSFNREKSIKAAESRQKSLDKIEKIDAPDKLPKPVKI
SFETQIKSGNDILHVENLSKSYGDMTLFENVEMDIKRGEKIALIGDNGRGKTTLFKIIMDEIQSNSGTKYIGKNVFIGYY
DQEQSDLNECNTVLDEVWDEFPEMTTTEVRNALAAFLFTGDDVFKEISKLSGGEKCKVNLLKLMLSKSNFLLLDEPTNHL
DIMSREALEDSLLNYDGTVLVISHDRYFLNKVIGKIYELNIDGIKEYLGNYDYYIHKKINPNRFDYEAITSENSKTKTQI
HQERKKKKEEEKKLKQEKLKMKNLEKEITDLEKVVNSLQEQLCLEEVYSDSTKSEKINKDIINKQKLIEDLYSEWENFME

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=536, Percent_Identity=27.6119402985075, Blast_Score=225, Evalue=1e-58,
Organism=Homo sapiens, GI27881506, Length=535, Percent_Identity=28.411214953271, Blast_Score=198, Evalue=1e-50,
Organism=Homo sapiens, GI10947137, Length=535, Percent_Identity=28.411214953271, Blast_Score=198, Evalue=1e-50,
Organism=Homo sapiens, GI10947135, Length=543, Percent_Identity=26.7034990791897, Blast_Score=186, Evalue=6e-47,
Organism=Homo sapiens, GI69354671, Length=543, Percent_Identity=26.7034990791897, Blast_Score=186, Evalue=7e-47,
Organism=Homo sapiens, GI31657092, Length=190, Percent_Identity=28.4210526315789, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI1789751, Length=620, Percent_Identity=31.2903225806452, Blast_Score=311, Evalue=6e-86,
Organism=Escherichia coli, GI2367384, Length=549, Percent_Identity=33.5154826958106, Blast_Score=291, Evalue=7e-80,
Organism=Escherichia coli, GI1787041, Length=545, Percent_Identity=32.8440366972477, Blast_Score=276, Evalue=3e-75,
Organism=Escherichia coli, GI1787182, Length=653, Percent_Identity=28.9433384379786, Blast_Score=265, Evalue=5e-72,
Organism=Escherichia coli, GI1788165, Length=187, Percent_Identity=28.3422459893048, Blast_Score=80, Evalue=6e-16,
Organism=Escherichia coli, GI1789593, Length=262, Percent_Identity=22.1374045801527, Blast_Score=76, Evalue=8e-15,
Organism=Escherichia coli, GI1787029, Length=251, Percent_Identity=27.4900398406374, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI87081709, Length=201, Percent_Identity=25.8706467661692, Blast_Score=69, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17553372, Length=527, Percent_Identity=29.7912713472486, Blast_Score=218, Evalue=8e-57,
Organism=Caenorhabditis elegans, GI17559834, Length=539, Percent_Identity=28.9424860853432, Blast_Score=216, Evalue=3e-56,
Organism=Caenorhabditis elegans, GI17555318, Length=537, Percent_Identity=28.1191806331471, Blast_Score=215, Evalue=7e-56,
Organism=Saccharomyces cerevisiae, GI6321121, Length=536, Percent_Identity=30.2238805970149, Blast_Score=232, Evalue=1e-61,
Organism=Saccharomyces cerevisiae, GI6320874, Length=520, Percent_Identity=30.9615384615385, Blast_Score=209, Evalue=2e-54,
Organism=Saccharomyces cerevisiae, GI6324314, Length=395, Percent_Identity=25.3164556962025, Blast_Score=113, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6325030, Length=399, Percent_Identity=26.0651629072682, Blast_Score=110, Evalue=9e-25,
Organism=Saccharomyces cerevisiae, GI6323278, Length=396, Percent_Identity=25, Blast_Score=104, Evalue=5e-23,
Organism=Drosophila melanogaster, GI24642252, Length=550, Percent_Identity=29.6363636363636, Blast_Score=236, Evalue=4e-62,
Organism=Drosophila melanogaster, GI18859989, Length=550, Percent_Identity=29.6363636363636, Blast_Score=236, Evalue=4e-62,
Organism=Drosophila melanogaster, GI24666836, Length=544, Percent_Identity=27.7573529411765, Blast_Score=232, Evalue=5e-61,
Organism=Drosophila melanogaster, GI24641342, Length=532, Percent_Identity=28.9473684210526, Blast_Score=219, Evalue=5e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 74276; Mature: 74276

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVLSCKNISKAYGVDLILDNLTFNINEHDKVGLIGANGAGKSTLFKILTSSLEQDSGDI
CEEEEECCCCHHHCCEEEEECEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCE
FIDKSKSLGYLAQHLSLDSNNTIYEEVLDVFHDLIKMEEKLNKLEKLMNEPYDKNNKEYH
EEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
DKIIKDYTTYTDLYINRGGYTYKGEIHRVLRGLSFEEEDFNKQINILSGGQKTRVALCKL
HHHHHHHHHHHHEEEECCCEEEHHHHHHHHHCCCCCHHHHCCEEEEECCCCHHHHHHHHH
LLQSPNILLLDEPTNHLDLTAINWLEEYLKAYKGTVLIISHDRYFLDEITNQTFELISGH
HHCCCCEEEEECCCCCEEHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHCC
INCYNGNYSKFIELRKKEYEVKLKAYNLQQAEIKRQEKIIEKYRSFNREKSIKAAESRQK
EEEECCCHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
SLDKIEKIDAPDKLPKPVKISFETQIKSGNDILHVENLSKSYGDMTLFENVEMDIKRGEK
HHHHHHHCCCCCCCCCCEEEEEEEEECCCCCEEEEEHHHHHHCCEEEHHCCCHHHCCCCE
IALIGDNGRGKTTLFKIIMDEIQSNSGTKYIGKNVFIGYYDQEQSDLNECNTVLDEVWDE
EEEEECCCCCHHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCHHHHHHHHHHHHHHHHH
FPEMTTTEVRNALAAFLFTGDDVFKEISKLSGGEKCKVNLLKLMLSKSNFLLLDEPTNHL
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCHH
DIMSREALEDSLLNYDGTVLVISHDRYFLNKVIGKIYELNIDGIKEYLGNYDYYIHKKIN
HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCC
PNRFDYEAITSENSKTKTQIHQERKKKKEEEKKLKQEKLKMKNLEKEITDLEKVVNSLQE
CCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLCLEEVYSDSTKSEKINKDIINKQKLIEDLYSEWENFME
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVVLSCKNISKAYGVDLILDNLTFNINEHDKVGLIGANGAGKSTLFKILTSSLEQDSGDI
CEEEEECCCCHHHCCEEEEECEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCE
FIDKSKSLGYLAQHLSLDSNNTIYEEVLDVFHDLIKMEEKLNKLEKLMNEPYDKNNKEYH
EEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
DKIIKDYTTYTDLYINRGGYTYKGEIHRVLRGLSFEEEDFNKQINILSGGQKTRVALCKL
HHHHHHHHHHHHEEEECCCEEEHHHHHHHHHCCCCCHHHHCCEEEEECCCCHHHHHHHHH
LLQSPNILLLDEPTNHLDLTAINWLEEYLKAYKGTVLIISHDRYFLDEITNQTFELISGH
HHCCCCEEEEECCCCCEEHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHCC
INCYNGNYSKFIELRKKEYEVKLKAYNLQQAEIKRQEKIIEKYRSFNREKSIKAAESRQK
EEEECCCHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
SLDKIEKIDAPDKLPKPVKISFETQIKSGNDILHVENLSKSYGDMTLFENVEMDIKRGEK
HHHHHHHCCCCCCCCCCEEEEEEEEECCCCCEEEEEHHHHHHCCEEEHHCCCHHHCCCCE
IALIGDNGRGKTTLFKIIMDEIQSNSGTKYIGKNVFIGYYDQEQSDLNECNTVLDEVWDE
EEEEECCCCCHHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCHHHHHHHHHHHHHHHHH
FPEMTTTEVRNALAAFLFTGDDVFKEISKLSGGEKCKVNLLKLMLSKSNFLLLDEPTNHL
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCHH
DIMSREALEDSLLNYDGTVLVISHDRYFLNKVIGKIYELNIDGIKEYLGNYDYYIHKKIN
HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCC
PNRFDYEAITSENSKTKTQIHQERKKKKEEEKKLKQEKLKMKNLEKEITDLEKVVNSLQE
CCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLCLEEVYSDSTKSEKINKDIINKQKLIEDLYSEWENFME
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]