| Definition | Clostridium botulinum A str. Hall, complete genome. |
|---|---|
| Accession | NC_009698 |
| Length | 3,760,560 |
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The map label for this gene is cotI [H]
Identifier: 153935661
GI number: 153935661
Start: 3000346
End: 3001416
Strand: Direct
Name: cotI [H]
Synonym: CLC_2836
Alternate gene names: 153935661
Gene position: 3000346-3001416 (Clockwise)
Preceding gene: 153936509
Following gene: 153936697
Centisome position: 79.78
GC content: 25.21
Gene sequence:
>1071_bases ATGGCTTATGCGGCTAAGTCATTTGATATAGACTTATTATCTGAAGAAAACGTAAAAAAATACGTTCTTCCTAAATATAA TTTACAAACTGCTGATATTTGTCAAATTAAATTTAAAAATACAGAAAAGCAAAGAGCTGTTTACAAAGTTACCTATGGGA ATAACTGCTATTGCCTAAAAAAGGTATATTACGATGAATCTGATCTATTGTTTGTCTATTCTGCTGTAGAATGGTTTTAT AGAAATGGAATTAGAGTTCCTAGAATTCTTCCTGCTTGTGATGGCAATAGATTTGTAAATTATAATAATATGTTTTTTAT ACTTACCCCTTGGATTCAGGGAGAAAAATGTGATTATGATAGAACAGAACATATTATATATTCTATAGAAAATTTAGGTA GAATGCATGTTAGTGTTGAAAATTTTGTTCCTATAAAAGGTAGTAGAGTTAAAGAAAAAAAAGATAGTATCTATAGATCT CATGAAAAACATTTTTTTCACCTTTTAAATTGTTCCAATTATGCCTTTAAAGAAAAAGATAAATTCTCTGACTTTTTTCT AAAAAATTTTGAAAAAAATATTTTATTGGCTAGAACCTCCGTGGATATAGCCCATAGTATAAATAATAAAAATTTGCATA GATGTTTATGTCATTTAGATTACGTTAATAAAAATATTATATTATCCCCTAATAATGATATATGGGTCATAGATTTTGAT AAATGTGCTATAGATTATAGAGTACATGATATAGGCTATTTTTTGAGGAGGCTTTTAAGAAGAAAAAATACAAATTGGGA TGCAACACTAGCAGTTGAAATTTTAGAATACTATGATAAATTTATTCCTTTAAATTTAGATGAATATAAATATATATTGA GTTATTTATCCTTTCCTCAAAAATTTTGGAAAATATCTAGAGACTATTATAAAAATATAAATAAATGCAATAAAAAATCT TTCCAAAAAATCTTAAAAAGTTCTGTGGAAGACATAGATAATCAAAGTGAATTTGTATATTTATTTGGAAAACATATAGA ATCTAGATTTGGCAGAGATTTAATATATTAA
Upstream 100 bases:
>100_bases TCTATATTAAGTTAAGAACTCCTTTTTTTATTAAATCGTTATAATAAATGATTTAGATTAATATCATTATAGAAGAAAAT ATTTTTTAAGGAGTGTTTCT
Downstream 100 bases:
>100_bases AAAAGATGTAAGCCAATTTTACACTAGGCTTACATCCCTTATACTTATACTTTTACTTTCTTGGGTTTTTTATTTGAGCT TGTGCTGCAGCTAATCTTGC
Product: spore coat protein-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MAYAAKSFDIDLLSEENVKKYVLPKYNLQTADICQIKFKNTEKQRAVYKVTYGNNCYCLKKVYYDESDLLFVYSAVEWFY RNGIRVPRILPACDGNRFVNYNNMFFILTPWIQGEKCDYDRTEHIIYSIENLGRMHVSVENFVPIKGSRVKEKKDSIYRS HEKHFFHLLNCSNYAFKEKDKFSDFFLKNFEKNILLARTSVDIAHSINNKNLHRCLCHLDYVNKNIILSPNNDIWVIDFD KCAIDYRVHDIGYFLRRLLRRKNTNWDATLAVEILEYYDKFIPLNLDEYKYILSYLSFPQKFWKISRDYYKNINKCNKKS FQKILKSSVEDIDNQSEFVYLFGKHIESRFGRDLIY
Sequences:
>Translated_356_residues MAYAAKSFDIDLLSEENVKKYVLPKYNLQTADICQIKFKNTEKQRAVYKVTYGNNCYCLKKVYYDESDLLFVYSAVEWFY RNGIRVPRILPACDGNRFVNYNNMFFILTPWIQGEKCDYDRTEHIIYSIENLGRMHVSVENFVPIKGSRVKEKKDSIYRS HEKHFFHLLNCSNYAFKEKDKFSDFFLKNFEKNILLARTSVDIAHSINNKNLHRCLCHLDYVNKNIILSPNNDIWVIDFD KCAIDYRVHDIGYFLRRLLRRKNTNWDATLAVEILEYYDKFIPLNLDEYKYILSYLSFPQKFWKISRDYYKNINKCNKKS FQKILKSSVEDIDNQSEFVYLFGKHIESRFGRDLIY >Mature_355_residues AYAAKSFDIDLLSEENVKKYVLPKYNLQTADICQIKFKNTEKQRAVYKVTYGNNCYCLKKVYYDESDLLFVYSAVEWFYR NGIRVPRILPACDGNRFVNYNNMFFILTPWIQGEKCDYDRTEHIIYSIENLGRMHVSVENFVPIKGSRVKEKKDSIYRSH EKHFFHLLNCSNYAFKEKDKFSDFFLKNFEKNILLARTSVDIAHSINNKNLHRCLCHLDYVNKNIILSPNNDIWVIDFDK CAIDYRVHDIGYFLRRLLRRKNTNWDATLAVEILEYYDKFIPLNLDEYKYILSYLSFPQKFWKISRDYYKNINKCNKKSF QKILKSSVEDIDNQSEFVYLFGKHIESRFGRDLIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Spore wall, spore coat [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CotS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002575 - InterPro: IPR011009 - InterPro: IPR014255 [H]
Pfam domain/function: PF01636 APH [H]
EC number: NA
Molecular weight: Translated: 42740; Mature: 42609
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: PS00392 DDC_GAD_HDC_YDC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYAAKSFDIDLLSEENVKKYVLPKYNLQTADICQIKFKNTEKQRAVYKVTYGNNCYCLK CCCCCCCCCEEEECCCCCCEEECCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCEEEEE KVYYDESDLLFVYSAVEWFYRNGIRVPRILPACDGNRFVNYNNMFFILTPWIQGEKCDYD EEEECCCCEEEHHHHHHHHHHCCCCCCEEEECCCCCEEEEECCEEEEEECCCCCCCCCCC RTEHIIYSIENLGRMHVSVENFVPIKGSRVKEKKDSIYRSHEKHFFHLLNCSNYAFKEKD CHHHHEEEHHHCCEEEEEHHHEECCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCH KFSDFFLKNFEKNILLARTSVDIAHSINNKNLHRCLCHLDYVNKNIILSPNNDIWVIDFD HHHHHHHHCCCCCEEEEEECCHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCCEEEEEEC KCAIDYRVHDIGYFLRRLLRRKNTNWDATLAVEILEYYDKFIPLNLDEYKYILSYLSFPQ CEEEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH KFWKISRDYYKNINKCNKKSFQKILKSSVEDIDNQSEFVYLFGKHIESRFGRDLIY HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCCCCCC >Mature Secondary Structure AYAAKSFDIDLLSEENVKKYVLPKYNLQTADICQIKFKNTEKQRAVYKVTYGNNCYCLK CCCCCCCCEEEECCCCCCEEECCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCEEEEE KVYYDESDLLFVYSAVEWFYRNGIRVPRILPACDGNRFVNYNNMFFILTPWIQGEKCDYD EEEECCCCEEEHHHHHHHHHHCCCCCCEEEECCCCCEEEEECCEEEEEECCCCCCCCCCC RTEHIIYSIENLGRMHVSVENFVPIKGSRVKEKKDSIYRSHEKHFFHLLNCSNYAFKEKD CHHHHEEEHHHCCEEEEEHHHEECCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCH KFSDFFLKNFEKNILLARTSVDIAHSINNKNLHRCLCHLDYVNKNIILSPNNDIWVIDFD HHHHHHHHCCCCCEEEEEECCHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCCEEEEEEC KCAIDYRVHDIGYFLRRLLRRKNTNWDATLAVEILEYYDKFIPLNLDEYKYILSYLSFPQ CEEEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH KFWKISRDYYKNINKCNKKSFQKILKSSVEDIDNQSEFVYLFGKHIESRFGRDLIY HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7545510; 9387221; 9384377 [H]