| Definition | Clostridium botulinum A str. Hall, complete genome. |
|---|---|
| Accession | NC_009698 |
| Length | 3,760,560 |
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The map label for this gene is ywzG [H]
Identifier: 153935626
GI number: 153935626
Start: 2361373
End: 2361705
Strand: Direct
Name: ywzG [H]
Synonym: CLC_2233
Alternate gene names: 153935626
Gene position: 2361373-2361705 (Clockwise)
Preceding gene: 153936725
Following gene: 153934897
Centisome position: 62.79
GC content: 26.73
Gene sequence:
>333_bases ATGCCAACTGAAAACAGCTTATATTCAGGAGATATGACTATGCTTATCTTAAAATTACTTCAAAGTAAAGATATGTATGG TTATGAAATGATTGAAACTCTACAAATTAATTCAAACAATGTATTTCAATTTAAAGCAGGTACATTATACCCTTTACTAC ACAATTTAGTAAAACAAAACTATTTAAATTGTTATGAAAAAGAAGTTAGTGGAAAAATTCGTAAATATTATTCCTTAACA TTACAGGGTAAAAAATTATTGCAAGATAAAACCTCTATATGGCAAAAATATGTTAAAACTATGGCATCTGTGCTAGAACT AGAGGTGCATTAA
Upstream 100 bases:
>100_bases CGATATATCCTAATATTAACAAATTATATATAGATTATCTATATATCTTTGTAACTATAAAAGTTAAATAAATTTCTAAT ATCTGAAAGAGGTGAATAAA
Downstream 100 bases:
>100_bases TATGAGAGAAGATGAATACTTACGTATTTTAAGTAAAAACATTTCTAATAGAAAAATGAGGAAGGAGATTTGTATGGAAA TAAAAAATCACATTATGGAC
Product: PadR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MPTENSLYSGDMTMLILKLLQSKDMYGYEMIETLQINSNNVFQFKAGTLYPLLHNLVKQNYLNCYEKEVSGKIRKYYSLT LQGKKLLQDKTSIWQKYVKTMASVLELEVH
Sequences:
>Translated_110_residues MPTENSLYSGDMTMLILKLLQSKDMYGYEMIETLQINSNNVFQFKAGTLYPLLHNLVKQNYLNCYEKEVSGKIRKYYSLT LQGKKLLQDKTSIWQKYVKTMASVLELEVH >Mature_109_residues PTENSLYSGDMTMLILKLLQSKDMYGYEMIETLQINSNNVFQFKAGTLYPLLHNLVKQNYLNCYEKEVSGKIRKYYSLTL QGKKLLQDKTSIWQKYVKTMASVLELEVH
Specific function: Unknown
COG id: COG1695
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005149 - InterPro: IPR011991 [H]
Pfam domain/function: PF03551 PadR [H]
EC number: NA
Molecular weight: Translated: 12881; Mature: 12750
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTENSLYSGDMTMLILKLLQSKDMYGYEMIETLQINSNNVFQFKAGTLYPLLHNLVKQN CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHEEECCCCEEEEECCCHHHHHHHHHHHH YLNCYEKEVSGKIRKYYSLTLQGKKLLQDKTSIWQKYVKTMASVLELEVH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PTENSLYSGDMTMLILKLLQSKDMYGYEMIETLQINSNNVFQFKAGTLYPLLHNLVKQN CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHEEECCCCEEEEECCCHHHHHHHHHHHH YLNCYEKEVSGKIRKYYSLTLQGKKLLQDKTSIWQKYVKTMASVLELEVH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]