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The map label for this gene is 153935603

Identifier: 153935603

GI number: 153935603

Start: 684295

End: 685434

Strand: Reverse

Name: 153935603

Synonym: CLC_0667

Alternate gene names: NA

Gene position: 685434-684295 (Counterclockwise)

Preceding gene: 153936316

Following gene: 153936397

Centisome position: 18.23

GC content: 34.91

Gene sequence:

>1140_bases
GTGGAAATTGTTAAAGGAATGGGCCTATTGTTATTTACATTAGGATTATTTTCATTATTTAGCTTTAAAGCCCCTAAGGG
AAGTAAAGCTATGTCAGGACTAGCAAATGCAGCAGTAGCAACTTTTTTAGTAGAAGCTATTCATAAATGTATAAGTGGAG
ACTTTTTAAATTTTACTTTTCTAGGCAAAGTAGGAGAAGTATCAGGATCTATGGGAGGTGTGGCAGCAGCTATTTTAGTG
CCAATATCTATGGGAGCTAACCCCCTTTATGCAGTGGTAGCAGGTGTAGCCATAGGTGGATATGGCATATTACCTGGATT
TATAGCTGGATATATTATAGGTCTCATAGCACCTATATTTGATAAAAAGTTACCAGAAGGATTAAATACTATAGTAGGGG
CTCTTTTAATAGCTCCCTTAGCAAGATTTATAGCAATGGGAATAGATCCTGTGGTTAATGCTACATTAGTTAATATTGGA
CAAATGATATCCTTAGCTGCACAGCAATCACCATTAGTTATGGGATTCTTACTTGGTGGAATAATGAAAGTTGTATGTAC
CTCACCATTAAGTTCAATGGCAGTTACAGCTATGCTTGGACTACAAGGTTTAGCTATGGGTATCGCAGGTATAGCCTGTG
TTGGAGGCTCTTTTACAAATGGTATCATCTTTAAAAGACTTAAATTAGGTAATAAAAGCAATATAATAGCAGTAATGTTA
GAACCATTAACTCAAGCACCAATAGTAACTAAAAATCCTATTCCTATATATGGATCAAATATTTTAGGTGGAGGATTGGC
AGGACTTTCAGCAGCCTATTTTAATATAATAAATAATGCTCCAGGAACAGCATCCCCTATACCAGGACTACTCGCACCCT
TTGGATTTAATGATCCTAAAAAAGTTCTTATAGCTGTTACCTTTGCTGTAATAGGCGGCTCCATAGGTGGACTTGTTGGA
TCAGTTGTTTTTAAAGGTTTTGCTAAAAAAGACTACAATTCAGATGAAATTCTAGTTAATGAAATTAATAAATCCAATAA
TGATATTAATAATATTGCTGGTGAAACTGCCACAGAAATTGCTACTGATACTGCCGATACTAATGTTGATATATTAAATG
CTAAAGGTAATACTTTTTAA

Upstream 100 bases:

>100_bases
AAACTTTCCGAAACTTTTTGAAAGCTAGGCTATATAGTCTAAATAATCAATTAATTCTGAAAATTAATTGAAAAGTTGGG
ATCAAGGGAGGTTTCATATT

Downstream 100 bases:

>100_bases
ATATTTTTAATACAGTAAAATTAAATAATTGAACTAAAAAACAAAGAAGCAAGTATCTTTTATATTTGCTTAGATTATTC
AAAAACCCTATGCATTTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Regulatory Protein; Regulatory Protein PfoR; Transcriptional Regulator; Perfringolysin O Regulatory Protein; Transcriptional Regulator PfoR

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MEIVKGMGLLLFTLGLFSLFSFKAPKGSKAMSGLANAAVATFLVEAIHKCISGDFLNFTFLGKVGEVSGSMGGVAAAILV
PISMGANPLYAVVAGVAIGGYGILPGFIAGYIIGLIAPIFDKKLPEGLNTIVGALLIAPLARFIAMGIDPVVNATLVNIG
QMISLAAQQSPLVMGFLLGGIMKVVCTSPLSSMAVTAMLGLQGLAMGIAGIACVGGSFTNGIIFKRLKLGNKSNIIAVML
EPLTQAPIVTKNPIPIYGSNILGGGLAGLSAAYFNIINNAPGTASPIPGLLAPFGFNDPKKVLIAVTFAVIGGSIGGLVG
SVVFKGFAKKDYNSDEILVNEINKSNNDINNIAGETATEIATDTADTNVDILNAKGNTF

Sequences:

>Translated_379_residues
MEIVKGMGLLLFTLGLFSLFSFKAPKGSKAMSGLANAAVATFLVEAIHKCISGDFLNFTFLGKVGEVSGSMGGVAAAILV
PISMGANPLYAVVAGVAIGGYGILPGFIAGYIIGLIAPIFDKKLPEGLNTIVGALLIAPLARFIAMGIDPVVNATLVNIG
QMISLAAQQSPLVMGFLLGGIMKVVCTSPLSSMAVTAMLGLQGLAMGIAGIACVGGSFTNGIIFKRLKLGNKSNIIAVML
EPLTQAPIVTKNPIPIYGSNILGGGLAGLSAAYFNIINNAPGTASPIPGLLAPFGFNDPKKVLIAVTFAVIGGSIGGLVG
SVVFKGFAKKDYNSDEILVNEINKSNNDINNIAGETATEIATDTADTNVDILNAKGNTF
>Mature_379_residues
MEIVKGMGLLLFTLGLFSLFSFKAPKGSKAMSGLANAAVATFLVEAIHKCISGDFLNFTFLGKVGEVSGSMGGVAAAILV
PISMGANPLYAVVAGVAIGGYGILPGFIAGYIIGLIAPIFDKKLPEGLNTIVGALLIAPLARFIAMGIDPVVNATLVNIG
QMISLAAQQSPLVMGFLLGGIMKVVCTSPLSSMAVTAMLGLQGLAMGIAGIACVGGSFTNGIIFKRLKLGNKSNIIAVML
EPLTQAPIVTKNPIPIYGSNILGGGLAGLSAAYFNIINNAPGTASPIPGLLAPFGFNDPKKVLIAVTFAVIGGSIGGLVG
SVVFKGFAKKDYNSDEILVNEINKSNNDINNIAGETATEIATDTADTNVDILNAKGNTF

Specific function: Unknown

COG id: COG1299

COG function: function code G; Phosphotransferase system, fructose-specific IIC component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38637; Mature: 38637

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIVKGMGLLLFTLGLFSLFSFKAPKGSKAMSGLANAAVATFLVEAIHKCISGDFLNFTF
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
LGKVGEVSGSMGGVAAAILVPISMGANPLYAVVAGVAIGGYGILPGFIAGYIIGLIAPIF
ECCHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
DKKLPEGLNTIVGALLIAPLARFIAMGIDPVVNATLVNIGQMISLAAQQSPLVMGFLLGG
HHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
IMKVVCTSPLSSMAVTAMLGLQGLAMGIAGIACVGGSFTNGIIFKRLKLGNKSNIIAVML
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEEEE
EPLTQAPIVTKNPIPIYGSNILGGGLAGLSAAYFNIINNAPGTASPIPGLLAPFGFNDPK
CCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCHH
KVLIAVTFAVIGGSIGGLVGSVVFKGFAKKDYNSDEILVNEINKSNNDINNIAGETATEI
HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHCCCHHHHH
ATDTADTNVDILNAKGNTF
HCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MEIVKGMGLLLFTLGLFSLFSFKAPKGSKAMSGLANAAVATFLVEAIHKCISGDFLNFTF
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
LGKVGEVSGSMGGVAAAILVPISMGANPLYAVVAGVAIGGYGILPGFIAGYIIGLIAPIF
ECCHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
DKKLPEGLNTIVGALLIAPLARFIAMGIDPVVNATLVNIGQMISLAAQQSPLVMGFLLGG
HHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
IMKVVCTSPLSSMAVTAMLGLQGLAMGIAGIACVGGSFTNGIIFKRLKLGNKSNIIAVML
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEEEE
EPLTQAPIVTKNPIPIYGSNILGGGLAGLSAAYFNIINNAPGTASPIPGLLAPFGFNDPK
CCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCHH
KVLIAVTFAVIGGSIGGLVGSVVFKGFAKKDYNSDEILVNEINKSNNDINNIAGETATEI
HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHCCCHHHHH
ATDTADTNVDILNAKGNTF
HCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA