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The map label for this gene is 153935602

Identifier: 153935602

GI number: 153935602

Start: 1005837

End: 1006679

Strand: Direct

Name: 153935602

Synonym: CLC_0981

Alternate gene names: NA

Gene position: 1005837-1006679 (Clockwise)

Preceding gene: 153934794

Following gene: 153935181

Centisome position: 26.75

GC content: 28.23

Gene sequence:

>843_bases
ATGAAAAATGGAATAACAACATTCAAAGCAATAAGTGCTATATTTGGGGGAATTTTTGTTTTGGTAATCTGCCAATCGCT
AAGCCATCTAGCTTATATACTTCCATTGCCGAAGGTAATTACGAGTATGGTTTTTGGAATAACTTATATACTGCTTTCTT
ATCTTTTTCTATCAAATTTATGTAAAAAATTTTTTTGTCATAGTTTATTAGAATGTGGTATTGGAAAACCAAAGATTAAT
TTTACATGGCTAGTAATTGGAATAATTTTACCAATCATGGTATCTGTATTATTAATTCTTACTCCAGGATACTTTGTTAA
TAATGGAAAATCAACAACTGAAATAATAAGTAAAATTATAATTTCTATTTTTACTGTAGGTTGTGCTGCAGTTGTTGAAG
AAATGATTTTCAGAGGGTTTATTATGTATATATTGAAACAGCGATGGGGTAAAATGATATCTATATTTGTACCATCAATT
GTTTTTGGATTACTTCATACAATGGGAGGAATGAATTTTAGTGATATTTTAATGTTATTTATCGCTGGGACAAGTGTTGG
TATAATGTTTTCACTTATTACTTATGAAAGTAAAACAATTTGGCCAAGTGCTATAGTACATGCTATTTGGAATATCATTA
TTATTGGAGGCATATTAGACATAGGTGTCAAGCATAACGCTGAATGCATTTATTCATATGTTCTTAATTCAAAATCAATA
TTGTTAACTGGGGGACACTTTGGAATAGAAGCATCAGTAATTTCTATAATTGGATATATTGCAGTAATTAGTTTTACAAT
GTTTAGAGTTTATAAAAAGAAAGATATTGCCATAGATATTTAA

Upstream 100 bases:

>100_bases
ATTTATGGAAAGTATGGTATAATTTTAGTGTTGATAAATCGTAGTTATATTTTATGTTTGAATGATGATATTTTTATTAG
GTCAGGAGGAAACATAGAGA

Downstream 100 bases:

>100_bases
GTAATAGCTGAGAAAACGAACAATTTACTAAAACACCGCATTATTCAAATATGAATTTTGGGGTGTTTTTCTATAATGCA
TCCCCTGGTGCATATAAATA

Product: CAAX amino terminal protease family protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKNGITTFKAISAIFGGIFVLVICQSLSHLAYILPLPKVITSMVFGITYILLSYLFLSNLCKKFFCHSLLECGIGKPKIN
FTWLVIGIILPIMVSVLLILTPGYFVNNGKSTTEIISKIIISIFTVGCAAVVEEMIFRGFIMYILKQRWGKMISIFVPSI
VFGLLHTMGGMNFSDILMLFIAGTSVGIMFSLITYESKTIWPSAIVHAIWNIIIIGGILDIGVKHNAECIYSYVLNSKSI
LLTGGHFGIEASVISIIGYIAVISFTMFRVYKKKDIAIDI

Sequences:

>Translated_280_residues
MKNGITTFKAISAIFGGIFVLVICQSLSHLAYILPLPKVITSMVFGITYILLSYLFLSNLCKKFFCHSLLECGIGKPKIN
FTWLVIGIILPIMVSVLLILTPGYFVNNGKSTTEIISKIIISIFTVGCAAVVEEMIFRGFIMYILKQRWGKMISIFVPSI
VFGLLHTMGGMNFSDILMLFIAGTSVGIMFSLITYESKTIWPSAIVHAIWNIIIIGGILDIGVKHNAECIYSYVLNSKSI
LLTGGHFGIEASVISIIGYIAVISFTMFRVYKKKDIAIDI
>Mature_280_residues
MKNGITTFKAISAIFGGIFVLVICQSLSHLAYILPLPKVITSMVFGITYILLSYLFLSNLCKKFFCHSLLECGIGKPKIN
FTWLVIGIILPIMVSVLLILTPGYFVNNGKSTTEIISKIIISIFTVGCAAVVEEMIFRGFIMYILKQRWGKMISIFVPSI
VFGLLHTMGGMNFSDILMLFIAGTSVGIMFSLITYESKTIWPSAIVHAIWNIIIIGGILDIGVKHNAECIYSYVLNSKSI
LLTGGHFGIEASVISIIGYIAVISFTMFRVYKKKDIAIDI

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30949; Mature: 30949

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNGITTFKAISAIFGGIFVLVICQSLSHLAYILPLPKVITSMVFGITYILLSYLFLSNL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CKKFFCHSLLECGIGKPKINFTWLVIGIILPIMVSVLLILTPGYFVNNGKSTTEIISKII
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHH
ISIFTVGCAAVVEEMIFRGFIMYILKQRWGKMISIFVPSIVFGLLHTMGGMNFSDILMLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IAGTSVGIMFSLITYESKTIWPSAIVHAIWNIIIIGGILDIGVKHNAECIYSYVLNSKSI
HHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEE
LLTGGHFGIEASVISIIGYIAVISFTMFRVYKKKDIAIDI
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC
>Mature Secondary Structure
MKNGITTFKAISAIFGGIFVLVICQSLSHLAYILPLPKVITSMVFGITYILLSYLFLSNL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CKKFFCHSLLECGIGKPKINFTWLVIGIILPIMVSVLLILTPGYFVNNGKSTTEIISKII
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHH
ISIFTVGCAAVVEEMIFRGFIMYILKQRWGKMISIFVPSIVFGLLHTMGGMNFSDILMLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IAGTSVGIMFSLITYESKTIWPSAIVHAIWNIIIIGGILDIGVKHNAECIYSYVLNSKSI
HHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEE
LLTGGHFGIEASVISIIGYIAVISFTMFRVYKKKDIAIDI
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA