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The map label for this gene is thiW

Identifier: 153935503

GI number: 153935503

Start: 2312909

End: 2313568

Strand: Reverse

Name: thiW

Synonym: CLC_2177

Alternate gene names: NA

Gene position: 2313568-2312909 (Counterclockwise)

Preceding gene: 153936041

Following gene: 153935485

Centisome position: 61.52

GC content: 32.88

Gene sequence:

>660_bases
TTGGTTACACTAAAATCATACCTCAATAATGGTGTTTATTTCCTATATGACATATTGGGAAATTTAATGTTATTAAGGAG
GTATTTTATTATGGAGAAAAACTCAAAACTATTAAAGAAACTTATGTTAGCAATGATTGTGGCAATGGGAATTGTAATTT
CACCAATTCTTCGTATTGAGGGAATGTGCCCTATGGCCCATTTTATTAACATTTTATGTTCTGTTATCCTTGGACCCTGG
TATTCACTGCTTTGTGCTACATTGATTGGTGTAATAAGAATGTTTTTTATGGGGATTCCACCTTTAGCTTTAACTGGAGC
GGTTTTTGGGGCATTTTTGTCTGGAGTTTCATACAGAGTATCTAAGGGAAAGTTAATTTGTGCTATTGTAGGTGAAGTTA
TAGGAACTGGTGTTATAGGCGCCATACTTTCATATCCTATTATGACATTTATTTGGGGCAGAACAGGTCTTACATGGATA
TTTTATGTTCCTTCATTTATTATGGCTGCGCTTATTGGAGGAACAATTGCATTTATTTTTCTAGGAGCATTAAGTAGGAC
AGGTAATCTTACAAAAATTCAAAGAAGTTTGGGGGCAAAAATTTATGATAAAGCAAGAATTAATAATAAACAAACTATTG
CAAATAAGACAGAGTATTAA

Upstream 100 bases:

>100_bases
AAATACAACTAAATAGCGAGGGAACTTGTGTTTCAAGGTGAGAGGAAGCTTTTCAGCTTCGACCGACTAATATGACTTAT
GTCATATAGGAAACTGCTAT

Downstream 100 bases:

>100_bases
ATTAAAAAAACCTCTCATTCACTATATTACAAATCCAATTTCAATAAATGATTGTGCAAATATAATTCTTGCTGCTGGCG
CAAAGCCCATTATGGCCGAG

Product: thiW protein

Products: NA

Alternate protein names: Hydroxyethylthiazole Permease; Thiazole Transporter ThiW; Integral Membrane Protein; Protein ThiW

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MVTLKSYLNNGVYFLYDILGNLMLLRRYFIMEKNSKLLKKLMLAMIVAMGIVISPILRIEGMCPMAHFINILCSVILGPW
YSLLCATLIGVIRMFFMGIPPLALTGAVFGAFLSGVSYRVSKGKLICAIVGEVIGTGVIGAILSYPIMTFIWGRTGLTWI
FYVPSFIMAALIGGTIAFIFLGALSRTGNLTKIQRSLGAKIYDKARINNKQTIANKTEY

Sequences:

>Translated_219_residues
MVTLKSYLNNGVYFLYDILGNLMLLRRYFIMEKNSKLLKKLMLAMIVAMGIVISPILRIEGMCPMAHFINILCSVILGPW
YSLLCATLIGVIRMFFMGIPPLALTGAVFGAFLSGVSYRVSKGKLICAIVGEVIGTGVIGAILSYPIMTFIWGRTGLTWI
FYVPSFIMAALIGGTIAFIFLGALSRTGNLTKIQRSLGAKIYDKARINNKQTIANKTEY
>Mature_219_residues
MVTLKSYLNNGVYFLYDILGNLMLLRRYFIMEKNSKLLKKLMLAMIVAMGIVISPILRIEGMCPMAHFINILCSVILGPW
YSLLCATLIGVIRMFFMGIPPLALTGAVFGAFLSGVSYRVSKGKLICAIVGEVIGTGVIGAILSYPIMTFIWGRTGLTWI
FYVPSFIMAALIGGTIAFIFLGALSRTGNLTKIQRSLGAKIYDKARINNKQTIANKTEY

Specific function: Unknown

COG id: COG4732

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24142; Mature: 24142

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTLKSYLNNGVYFLYDILGNLMLLRRYFIMEKNSKLLKKLMLAMIVAMGIVISPILRIE
CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GMCPMAHFINILCSVILGPWYSLLCATLIGVIRMFFMGIPPLALTGAVFGAFLSGVSYRV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
SKGKLICAIVGEVIGTGVIGAILSYPIMTFIWGRTGLTWIFYVPSFIMAALIGGTIAFIF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LGALSRTGNLTKIQRSLGAKIYDKARINNKQTIANKTEY
HHHHHCCCCHHHHHHHHCHHHHHHHHCCCCHHHCCCCCC
>Mature Secondary Structure
MVTLKSYLNNGVYFLYDILGNLMLLRRYFIMEKNSKLLKKLMLAMIVAMGIVISPILRIE
CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GMCPMAHFINILCSVILGPWYSLLCATLIGVIRMFFMGIPPLALTGAVFGAFLSGVSYRV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
SKGKLICAIVGEVIGTGVIGAILSYPIMTFIWGRTGLTWIFYVPSFIMAALIGGTIAFIF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LGALSRTGNLTKIQRSLGAKIYDKARINNKQTIANKTEY
HHHHHCCCCHHHHHHHHCHHHHHHHHCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA