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The map label for this gene is 153935443

Identifier: 153935443

GI number: 153935443

Start: 297451

End: 298125

Strand: Reverse

Name: 153935443

Synonym: CLC_0316

Alternate gene names: NA

Gene position: 298125-297451 (Counterclockwise)

Preceding gene: 153935393

Following gene: 153935155

Centisome position: 7.93

GC content: 37.63

Gene sequence:

>675_bases
GTGATATATTTTTGTCCTATTTATGGTAACTGGGTTGAATACTCCAGCGATGATAATCTTGACTATAGTGGATACTGGCC
TCCTAGGAACATAAGGGCTGAAGTAACTAATCAAACAATCATCGATAAATGGAATACAGTCTCTCCCCCTCCTGCACCCG
AACTGAAATCAGTAGCAGTTGATCCCAAAACCAGTGCACTATTAATATTAGATATGGAGGCCTCTATATGCAAAAGCTCC
CGCTGTATAGCCTCTATCCCTAATATTCATAATTTATTAACGAAAGCCCGTAAAAATAACATGCTAGTTGTGTATAGCCT
TACACATGTGGGAAATCCCAGAGATATTTTCAAGCAGTTAGCCCTTTTGCCAGGTGATCCTATTGTGAAATCAAACGTAG
ATAAATTCTATAAAACCAATTTAGAGAAAATATTACAAGAAAAAGGTATTAAAACTGTTGTAGTTACTGGTTATGCCGCT
AATGGTGCGGTTCTTCATACAGGAACTAGTGCTGCTTTCCGAGGTTACAATGTTATTATTCCCGTTGACTGCATGTCTGC
TAATAATCTTTATGGCGAACAATACACTGCATGGCATATGCTTAATAGTCCTGGAACTAGAAATCGAGCAGTTCTAACAA
AGGCTGATTTAATTAGCTTTTACCACGATAATTAA

Upstream 100 bases:

>100_bases
ATTAAGGCTATTTTTATTTTGAGGCACCCTCAATTGCAGTAACTTTTTATTATATATTACATAGTATGTAATGATATAAA
ATCATATTAGGAGGATTAAT

Downstream 100 bases:

>100_bases
TAATAAAAGTAAAGTTCAGCTTTAATCTAGTAAAATTAAGTATTAAAAATATATTATATAAGTAAAAAACTTTTATGTAC
TAACCATTAACAATTTTAAG

Product: isochorismate family protein

Products: NA

Alternate protein names: Isochorismatase; Isochorismate Family Protein; Isochorismatase Hydrolase Protein; Nicotinamidase-Like Amidase; Hydrolase

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MIYFCPIYGNWVEYSSDDNLDYSGYWPPRNIRAEVTNQTIIDKWNTVSPPPAPELKSVAVDPKTSALLILDMEASICKSS
RCIASIPNIHNLLTKARKNNMLVVYSLTHVGNPRDIFKQLALLPGDPIVKSNVDKFYKTNLEKILQEKGIKTVVVTGYAA
NGAVLHTGTSAAFRGYNVIIPVDCMSANNLYGEQYTAWHMLNSPGTRNRAVLTKADLISFYHDN

Sequences:

>Translated_224_residues
MIYFCPIYGNWVEYSSDDNLDYSGYWPPRNIRAEVTNQTIIDKWNTVSPPPAPELKSVAVDPKTSALLILDMEASICKSS
RCIASIPNIHNLLTKARKNNMLVVYSLTHVGNPRDIFKQLALLPGDPIVKSNVDKFYKTNLEKILQEKGIKTVVVTGYAA
NGAVLHTGTSAAFRGYNVIIPVDCMSANNLYGEQYTAWHMLNSPGTRNRAVLTKADLISFYHDN
>Mature_224_residues
MIYFCPIYGNWVEYSSDDNLDYSGYWPPRNIRAEVTNQTIIDKWNTVSPPPAPELKSVAVDPKTSALLILDMEASICKSS
RCIASIPNIHNLLTKARKNNMLVVYSLTHVGNPRDIFKQLALLPGDPIVKSNVDKFYKTNLEKILQEKGIKTVVVTGYAA
NGAVLHTGTSAAFRGYNVIIPVDCMSANNLYGEQYTAWHMLNSPGTRNRAVLTKADLISFYHDN

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24984; Mature: 24984

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYFCPIYGNWVEYSSDDNLDYSGYWPPRNIRAEVTNQTIIDKWNTVSPPPAPELKSVAV
CEEEEEECCCEEEECCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCCCCCCCCEEEE
DPKTSALLILDMEASICKSSRCIASIPNIHNLLTKARKNNMLVVYSLTHVGNPRDIFKQL
CCCCCEEEEEECCHHHHCCCCCEEECCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHH
ALLPGDPIVKSNVDKFYKTNLEKILQEKGIKTVVVTGYAANGAVLHTGTSAAFRGYNVII
HCCCCCCCHHCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEECCCCHHCCCCEEEE
PVDCMSANNLYGEQYTAWHMLNSPGTRNRAVLTKADLISFYHDN
EEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEHHHEEEEECCC
>Mature Secondary Structure
MIYFCPIYGNWVEYSSDDNLDYSGYWPPRNIRAEVTNQTIIDKWNTVSPPPAPELKSVAV
CEEEEEECCCEEEECCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCCCCCCCCEEEE
DPKTSALLILDMEASICKSSRCIASIPNIHNLLTKARKNNMLVVYSLTHVGNPRDIFKQL
CCCCCEEEEEECCHHHHCCCCCEEECCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHH
ALLPGDPIVKSNVDKFYKTNLEKILQEKGIKTVVVTGYAANGAVLHTGTSAAFRGYNVII
HCCCCCCCHHCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEECCCCHHCCCCEEEE
PVDCMSANNLYGEQYTAWHMLNSPGTRNRAVLTKADLISFYHDN
EEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEHHHEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA