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The map label for this gene is ybbI [C]

Identifier: 153935424

GI number: 153935424

Start: 1009058

End: 1010332

Strand: Direct

Name: ybbI [C]

Synonym: CLC_0985

Alternate gene names: 153935424

Gene position: 1009058-1010332 (Clockwise)

Preceding gene: 153936785

Following gene: 153934480

Centisome position: 26.83

GC content: 25.49

Gene sequence:

>1275_bases
ATGAAAATAAAAGATGCAGAAAGGTTAACAGGATTATCCCAAAAAACAATTCGTTATTATGAAAGTGAGGGATTAATTTC
TGTTAAGAGAAATTCAAATTCATATCGAGAATATGATGAGAACAATATTAATAAATTAAGAAGAATAAAAGTACTTAGAA
AACTAGATGTACCAATTTCTACAATAAAGAAACTTAATCTTAAAGAAGCTTCACTGCCAGAGATTTTAGAAGGTAAAATT
AAGGAATTAGATGGAAATGAATTAAATCTAGAACGTAAAAAAGGTATTATAGAAGCAATATTAAAAGAGATAAATAAAAA
TCCTAATATTGATTTAGCTGAGTACTGTAAAGATTTTGAATACATTGAAAGTGATGAGTTTACTGAGTTTTTAGGGGAAA
TTAAGGAACTTAGAGAAGTTTCATTAGCGTATCAGATTTTAATTACTTTAATGTTAAGTGGGCCACTTTTATGGCTTTTT
ATTAATATTAAGAATAGTAATTATGAATTTATTGGTATAAATAGTATTTTGGCAATAATAAGTACAGTATTACTTACATT
GATATGGAGAGGATTTTTAAAACAAAAAAATAAAAAAGTCAGGGGTACGGGTTTAGTTTTATTAAGTGTTATTCTTATAA
TAGTCTTATCTCTAGTGGTTTTTGTTGGGATATTAAAATTGCAACAATTTATATTTGTCCCAGAAGATTACTTAATGTTT
ATGTTTAAACCACCATATAGCTATTTAATTTTCTTTTTTGAACTAGAAATTATTATTGTTTTTGTTTCTATATTATATAA
AAGAATAAAAAATGCAGAATGGAAGTGGGGAGCTAAGTTATTTCAATTTGTTAAGAAAAATATTGTCGGAACTATTGTTT
TAAACATTGTTTTATTATATGTGTGTCTTACTGGTATTACTGTAGTAACCAAAAATAAAATTATGGACTACAATTTTTAT
AGTCCAACAGGAACTACATATTCCTATAGTGATATTACTAAAGTTCAAGCTGGATTTAAAGGTAAAAAGTTTAAGATCTT
TAAAAGTCATGCAGGGGATTTTTATTATATTGTAAATTTTAAAGATGGTAAAAAAATAAACTTTTATCAAGCCAATAGTG
CATTGGAGGACACTTATTTAGAACTGGAAATATTTGATAAATCAATTATGAAGGCTAGCAAAGTACAAAAAGAATCTTCA
AAAGAAAATTATCAATTTTGCGATTTTGACAAAAGGTACGTGGATAGATTTTTAAGAATAATTGAAAATAGGTAA

Upstream 100 bases:

>100_bases
GATTACTAAAAAAATAATAAGTTTTAAACAAATTATTGACATTCTAGTAACTGTAAGATGTTTAATATATGTAAAATTAA
TTGTATAAGGGAGACTAGGA

Downstream 100 bases:

>100_bases
AGGAAGATAAAAATTCACCTTGGTTAATTGATAAAGTCGAAGAAGGTCAAATATTTATAAATTTGGGGGTAAAAATATGA
ATAATTATATTATTAGAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Membrane-Associated MerR Family Transcriptional Regulator; Transcriptional Regulator MerR Family Protein; Membrane-Associated MerR-Family Transcriptional Regulator

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MKIKDAERLTGLSQKTIRYYESEGLISVKRNSNSYREYDENNINKLRRIKVLRKLDVPISTIKKLNLKEASLPEILEGKI
KELDGNELNLERKKGIIEAILKEINKNPNIDLAEYCKDFEYIESDEFTEFLGEIKELREVSLAYQILITLMLSGPLLWLF
INIKNSNYEFIGINSILAIISTVLLTLIWRGFLKQKNKKVRGTGLVLLSVILIIVLSLVVFVGILKLQQFIFVPEDYLMF
MFKPPYSYLIFFFELEIIIVFVSILYKRIKNAEWKWGAKLFQFVKKNIVGTIVLNIVLLYVCLTGITVVTKNKIMDYNFY
SPTGTTYSYSDITKVQAGFKGKKFKIFKSHAGDFYYIVNFKDGKKINFYQANSALEDTYLELEIFDKSIMKASKVQKESS
KENYQFCDFDKRYVDRFLRIIENR

Sequences:

>Translated_424_residues
MKIKDAERLTGLSQKTIRYYESEGLISVKRNSNSYREYDENNINKLRRIKVLRKLDVPISTIKKLNLKEASLPEILEGKI
KELDGNELNLERKKGIIEAILKEINKNPNIDLAEYCKDFEYIESDEFTEFLGEIKELREVSLAYQILITLMLSGPLLWLF
INIKNSNYEFIGINSILAIISTVLLTLIWRGFLKQKNKKVRGTGLVLLSVILIIVLSLVVFVGILKLQQFIFVPEDYLMF
MFKPPYSYLIFFFELEIIIVFVSILYKRIKNAEWKWGAKLFQFVKKNIVGTIVLNIVLLYVCLTGITVVTKNKIMDYNFY
SPTGTTYSYSDITKVQAGFKGKKFKIFKSHAGDFYYIVNFKDGKKINFYQANSALEDTYLELEIFDKSIMKASKVQKESS
KENYQFCDFDKRYVDRFLRIIENR
>Mature_424_residues
MKIKDAERLTGLSQKTIRYYESEGLISVKRNSNSYREYDENNINKLRRIKVLRKLDVPISTIKKLNLKEASLPEILEGKI
KELDGNELNLERKKGIIEAILKEINKNPNIDLAEYCKDFEYIESDEFTEFLGEIKELREVSLAYQILITLMLSGPLLWLF
INIKNSNYEFIGINSILAIISTVLLTLIWRGFLKQKNKKVRGTGLVLLSVILIIVLSLVVFVGILKLQQFIFVPEDYLMF
MFKPPYSYLIFFFELEIIIVFVSILYKRIKNAEWKWGAKLFQFVKKNIVGTIVLNIVLLYVCLTGITVVTKNKIMDYNFY
SPTGTTYSYSDITKVQAGFKGKKFKIFKSHAGDFYYIVNFKDGKKINFYQANSALEDTYLELEIFDKSIMKASKVQKESS
KENYQFCDFDKRYVDRFLRIIENR

Specific function: Copper responsive transcription regulator [C]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49577; Mature: 49577

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKDAERLTGLSQKTIRYYESEGLISVKRNSNSYREYDENNINKLRRIKVLRKLDVPIS
CCCCCHHHHHCCHHHHHHHHCCCCEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHCCCHH
TIKKLNLKEASLPEILEGKIKELDGNELNLERKKGIIEAILKEINKNPNIDLAEYCKDFE
HHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
YIESDEFTEFLGEIKELREVSLAYQILITLMLSGPLLWLFINIKNSNYEFIGINSILAII
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEEHHHHHHHH
STVLLTLIWRGFLKQKNKKVRGTGLVLLSVILIIVLSLVVFVGILKLQQFIFVPEDYLMF
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEE
MFKPPYSYLIFFFELEIIIVFVSILYKRIKNAEWKWGAKLFQFVKKNIVGTIVLNIVLLY
EECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VCLTGITVVTKNKIMDYNFYSPTGTTYSYSDITKVQAGFKGKKFKIFKSHAGDFYYIVNF
HHHHCCEEEECCCEEEEECCCCCCCEEEHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEE
KDGKKINFYQANSALEDTYLELEIFDKSIMKASKVQKESSKENYQFCDFDKRYVDRFLRI
CCCCEEEEEECCCCHHHHEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
IENR
HCCC
>Mature Secondary Structure
MKIKDAERLTGLSQKTIRYYESEGLISVKRNSNSYREYDENNINKLRRIKVLRKLDVPIS
CCCCCHHHHHCCHHHHHHHHCCCCEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHCCCHH
TIKKLNLKEASLPEILEGKIKELDGNELNLERKKGIIEAILKEINKNPNIDLAEYCKDFE
HHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
YIESDEFTEFLGEIKELREVSLAYQILITLMLSGPLLWLFINIKNSNYEFIGINSILAII
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEEHHHHHHHH
STVLLTLIWRGFLKQKNKKVRGTGLVLLSVILIIVLSLVVFVGILKLQQFIFVPEDYLMF
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEE
MFKPPYSYLIFFFELEIIIVFVSILYKRIKNAEWKWGAKLFQFVKKNIVGTIVLNIVLLY
EECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VCLTGITVVTKNKIMDYNFYSPTGTTYSYSDITKVQAGFKGKKFKIFKSHAGDFYYIVNF
HHHHCCEEEECCCEEEEECCCCCCCEEEHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEE
KDGKKINFYQANSALEDTYLELEIFDKSIMKASKVQKESSKENYQFCDFDKRYVDRFLRI
CCCCEEEEEECCCCHHHHEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
IENR
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA