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The map label for this gene is 153935405

Identifier: 153935405

GI number: 153935405

Start: 835453

End: 836031

Strand: Direct

Name: 153935405

Synonym: CLC_0816

Alternate gene names: NA

Gene position: 835453-836031 (Clockwise)

Preceding gene: 153934744

Following gene: 153937140

Centisome position: 22.22

GC content: 27.63

Gene sequence:

>579_bases
ATGCCAAAAGGATTCACTGAAAATGAGAAAACTATAATAACTGAAAAACTAATTAGAGAATGCAAATCAAATTGGCAAAA
ATATGGCTACAAGAAAACAAGTATTGATGTTCTATGCAGAGATATTGGTATTTCAAAAGGGTCATTTTACAGTTTTTTTG
ATACGAAAGAGGCTTTATTCTATCAAGTCATCAAAGAAACACAAGAGAATTTGTATGAAATAGTTGAAGACCGGATTTCA
CAAAACCAAAGTAAATATGGAGTTGCAGAAGCATTAAAAGAAATCTATTTGGAATATAGTAAAAGTAGTTTTATGTATGA
TACTAAAAATCCAGATTTTTTGAGTTTCTTCAATAAATTAAGTGAACAGCAAAGAAAAGAATTAACTGAAAAGAGTTATG
TCGGAACAAAGTTTATGCTAAATAAACCATTTCTTTCATTAAAGATTGATGAAGATTTAGCTATCTCAATTCTGACAGCT
ATGTTAACAAGCATATCTCAAAAAGATAAGATGTTATGCGATTCTGTAGAAGTTTTTGGATTTATGATTGATAATTTAAT
TGATGATATATTTAATTAG

Upstream 100 bases:

>100_bases
GTAATACTTAAAAATATGTTGACCTATTCGTGCAGACACGATATTCTGTATATATGACTATAAATATTAAAATAGTCATA
TACAAGAAAGGAGGATAATA

Downstream 100 bases:

>100_bases
GAGGAAATTATGAAAAATTTAGATGTAAAGCAACATACTAAAAAATGCATGGATTTTGCAAAGAAAGCAGGGGATGGTTC
TTTTCCAAGCAAAGAAGCCG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MPKGFTENEKTIITEKLIRECKSNWQKYGYKKTSIDVLCRDIGISKGSFYSFFDTKEALFYQVIKETQENLYEIVEDRIS
QNQSKYGVAEALKEIYLEYSKSSFMYDTKNPDFLSFFNKLSEQQRKELTEKSYVGTKFMLNKPFLSLKIDEDLAISILTA
MLTSISQKDKMLCDSVEVFGFMIDNLIDDIFN

Sequences:

>Translated_192_residues
MPKGFTENEKTIITEKLIRECKSNWQKYGYKKTSIDVLCRDIGISKGSFYSFFDTKEALFYQVIKETQENLYEIVEDRIS
QNQSKYGVAEALKEIYLEYSKSSFMYDTKNPDFLSFFNKLSEQQRKELTEKSYVGTKFMLNKPFLSLKIDEDLAISILTA
MLTSISQKDKMLCDSVEVFGFMIDNLIDDIFN
>Mature_191_residues
PKGFTENEKTIITEKLIRECKSNWQKYGYKKTSIDVLCRDIGISKGSFYSFFDTKEALFYQVIKETQENLYEIVEDRISQ
NQSKYGVAEALKEIYLEYSKSSFMYDTKNPDFLSFFNKLSEQQRKELTEKSYVGTKFMLNKPFLSLKIDEDLAISILTAM
LTSISQKDKMLCDSVEVFGFMIDNLIDDIFN

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22448; Mature: 22317

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKGFTENEKTIITEKLIRECKSNWQKYGYKKTSIDVLCRDIGISKGSFYSFFDTKEALF
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH
YQVIKETQENLYEIVEDRISQNQSKYGVAEALKEIYLEYSKSSFMYDTKNPDFLSFFNKL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHH
SEQQRKELTEKSYVGTKFMLNKPFLSLKIDEDLAISILTAMLTSISQKDKMLCDSVEVFG
HHHHHHHHHHHHHCCCHHEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMIDNLIDDIFN
HHHHHHHHHHCC
>Mature Secondary Structure 
PKGFTENEKTIITEKLIRECKSNWQKYGYKKTSIDVLCRDIGISKGSFYSFFDTKEALF
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH
YQVIKETQENLYEIVEDRISQNQSKYGVAEALKEIYLEYSKSSFMYDTKNPDFLSFFNKL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHH
SEQQRKELTEKSYVGTKFMLNKPFLSLKIDEDLAISILTAMLTSISQKDKMLCDSVEVFG
HHHHHHHHHHHHHCCCHHEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMIDNLIDDIFN
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA