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The map label for this gene is yobV [H]

Identifier: 153935383

GI number: 153935383

Start: 948275

End: 949207

Strand: Direct

Name: yobV [H]

Synonym: CLC_0926

Alternate gene names: 153935383

Gene position: 948275-949207 (Clockwise)

Preceding gene: 153937443

Following gene: 153935773

Centisome position: 25.22

GC content: 28.83

Gene sequence:

>933_bases
TTGAAAATAGATAGATTGATATCCATTATTATGGTGTTACTAAATAATGAAAGAATAAGTGCAATAAAATTAGCTGAGAT
GTTTGAAGTTACACCTAGAACCATTTATAGGGATATAGATACAATATCTTTAGCAGGGATACCAATAATTACTCATACTG
GGGTAAATGGCGGTGTTAGTATAATGCCTGAATATAAAGTTGATAAAAAGTTTTTTACTGCTTCAGATATATCAACACTT
TTAATGGGGCTTTCTAGTGTTTCAACAACATTATCCAATAAAGAAGTTATAGGCACTTTAGAAAAGGTAAAGAGTTTACT
TCCGAAAGACCAATTTAGAGATATTGAATTAAAGTCAAATCAAATAACTATTGATCTTACTACGTGGATGGGGAATAAGA
GTTTTCAACCAAATCTTGAGAAAGTAAAAAGCGCTTTAAATGATAGTAAGTATTTATCATTTGAATATTATGTTGGTAAT
AGAAAAAAAGATAAACGCTGTATAGAACCATATAAACTAATATTGAAAGAAAATAACTGGTATTTACAAGGATATTGTAC
TTTAAGAGAAGATTTTAGAGTATTTAAATTATCTCGAATTTCAAACCTTGAAATATTAGAATCAATATTTGTACCAAGGG
AGTTTAAATCAAAACCATTAGATGGAAGTGGGTGGATAGATAAAAGGCTTATTACAATTAAGCTTCTAGTTGATTGGTCT
TTGAGAGAACAAATGGTTGAAAGATGTGGAGAAGATAATGTAAAGGCTTATGGAGAGGATAAATTTATAGTTGAGTTTCC
TTTTGTAGCTGATGATTTAGGCTATAATATATTAATGGGATTTGGAGATAAATGTGAATGTTTAGCTCCAGAGAATGTAC
GTGTAGAACTTATTAAACGTATTAAAAAGTTGTTACATATTTATGAGAATTAA

Upstream 100 bases:

>100_bases
GTATATTATTTCTAACAGATTAAATATATCACAGTAAATCTGACCCCATTATGTCAAGGTTATAAAATAAATGTATACAT
GATTTCAAGGAGGGATATTA

Downstream 100 bases:

>100_bases
TATTTACTTAGAAAAACCTCACTTGCAACTGATACGGAGAACCATACCATAAGTAAGTGAGGTTTTTACTAAAGTTGGAT
GAAGATATGGTGGTAAGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MKIDRLISIIMVLLNNERISAIKLAEMFEVTPRTIYRDIDTISLAGIPIITHTGVNGGVSIMPEYKVDKKFFTASDISTL
LMGLSSVSTTLSNKEVIGTLEKVKSLLPKDQFRDIELKSNQITIDLTTWMGNKSFQPNLEKVKSALNDSKYLSFEYYVGN
RKKDKRCIEPYKLILKENNWYLQGYCTLREDFRVFKLSRISNLEILESIFVPREFKSKPLDGSGWIDKRLITIKLLVDWS
LREQMVERCGEDNVKAYGEDKFIVEFPFVADDLGYNILMGFGDKCECLAPENVRVELIKRIKKLLHIYEN

Sequences:

>Translated_310_residues
MKIDRLISIIMVLLNNERISAIKLAEMFEVTPRTIYRDIDTISLAGIPIITHTGVNGGVSIMPEYKVDKKFFTASDISTL
LMGLSSVSTTLSNKEVIGTLEKVKSLLPKDQFRDIELKSNQITIDLTTWMGNKSFQPNLEKVKSALNDSKYLSFEYYVGN
RKKDKRCIEPYKLILKENNWYLQGYCTLREDFRVFKLSRISNLEILESIFVPREFKSKPLDGSGWIDKRLITIKLLVDWS
LREQMVERCGEDNVKAYGEDKFIVEFPFVADDLGYNILMGFGDKCECLAPENVRVELIKRIKKLLHIYEN
>Mature_310_residues
MKIDRLISIIMVLLNNERISAIKLAEMFEVTPRTIYRDIDTISLAGIPIITHTGVNGGVSIMPEYKVDKKFFTASDISTL
LMGLSSVSTTLSNKEVIGTLEKVKSLLPKDQFRDIELKSNQITIDLTTWMGNKSFQPNLEKVKSALNDSKYLSFEYYVGN
RKKDKRCIEPYKLILKENNWYLQGYCTLREDFRVFKLSRISNLEILESIFVPREFKSKPLDGSGWIDKRLITIKLLVDWS
LREQMVERCGEDNVKAYGEDKFIVEFPFVADDLGYNILMGFGDKCECLAPENVRVELIKRIKKLLHIYEN

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 35791; Mature: 35791

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIDRLISIIMVLLNNERISAIKLAEMFEVTPRTIYRDIDTISLAGIPIITHTGVNGGVS
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHCCCEEEECCCEEEEECCCCCCEE
IMPEYKVDKKFFTASDISTLLMGLSSVSTTLSNKEVIGTLEKVKSLLPKDQFRDIELKSN
EEECCCCCCCEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEECC
QITIDLTTWMGNKSFQPNLEKVKSALNDSKYLSFEYYVGNRKKDKRCIEPYKLILKENNW
EEEEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHEEEECCCE
YLQGYCTLREDFRVFKLSRISNLEILESIFVPREFKSKPLDGSGWIDKRLITIKLLVDWS
EEEEEEEECCCCCEEEHHHCCCHHHHHHHHCCHHHCCCCCCCCCCCCCEEEEEEEEECHH
LREQMVERCGEDNVKAYGEDKFIVEFPFVADDLGYNILMGFGDKCECLAPENVRVELIKR
HHHHHHHHCCCCCCEEECCCEEEEECCCEECCCCCEEEECCCCCCEEECCCCHHHHHHHH
IKKLLHIYEN
HHHHHHHHCC
>Mature Secondary Structure
MKIDRLISIIMVLLNNERISAIKLAEMFEVTPRTIYRDIDTISLAGIPIITHTGVNGGVS
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHCCCEEEECCCEEEEECCCCCCEE
IMPEYKVDKKFFTASDISTLLMGLSSVSTTLSNKEVIGTLEKVKSLLPKDQFRDIELKSN
EEECCCCCCCEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEECC
QITIDLTTWMGNKSFQPNLEKVKSALNDSKYLSFEYYVGNRKKDKRCIEPYKLILKENNW
EEEEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHEEEECCCE
YLQGYCTLREDFRVFKLSRISNLEILESIFVPREFKSKPLDGSGWIDKRLITIKLLVDWS
EEEEEEEECCCCCEEEHHHCCCHHHHHHHHCCHHHCCCCCCCCCCCCCEEEEEEEEECHH
LREQMVERCGEDNVKAYGEDKFIVEFPFVADDLGYNILMGFGDKCECLAPENVRVELIKR
HHHHHHHHCCCCCCEEECCCEEEEECCCEECCCCCEEEECCCCCCEEECCCCHHHHHHHH
IKKLLHIYEN
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]