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The map label for this gene is ykcB [H]

Identifier: 153935234

GI number: 153935234

Start: 344213

End: 346486

Strand: Direct

Name: ykcB [H]

Synonym: CLC_0358

Alternate gene names: 153935234

Gene position: 344213-346486 (Clockwise)

Preceding gene: 153937569

Following gene: 153935953

Centisome position: 9.15

GC content: 32.37

Gene sequence:

>2274_bases
ATGAAAAAGATAAAGTTTACAAAAGAGAATATAGCGTTATCGTTAATTTTGATATTATCCTTAATATTAAATTTAGCGAA
TTTGAACATAGAAGGATACGCAAATCAATATTATGCCGCAGGTGTAAAGAGCATGACTTTAAGTTTAAAGAATTTTTTCT
TTATATCCTTTGATCCAGCCAGTTTTGTAAGTATTGATAAGCCACCTTTGGGTTTTTGGATACAAGCTATATTTGCTAAA
ATATTTGGTTTTAGTGGATGGAGTATAATATTACCTCAGGCTATTGCTGGGGTAGTATCAGTAGGATTAATATATGTTAT
TGTTAAAAGAAGATTTGGAACTGCTGCGGGTCTTATTTCTGCAATATGTCTTGCAGTTACGCCTGTTTTTGTAGCTGTAA
GTAGAAATAACACTTGTGATAATTTACTTGTTTTAACATTACTATTAGCTTGCTTAGTTCTTTCTAAGGCAGCAGAAAAA
GGGAAACTAAAATATCTTTTAATAAGTTTAGCAATTATAGGGATCGGATTTAATATAAAAATGCTTCAAGCATATATGAT
AATACCAGCTATATATATAACTTATCTTCTTTCTAATGCAGTATCCTTCAAAAAAAGAATAGTTCATCTTATGGCTGGTA
CAATTATTTTAATTTTAGTTTCATTGTCCTGGGCCTTTATTGTAGACTTAATACCTGAAGGAAATAGACCTTATGTAGGA
AGTAGCACTAATAATTCAGTTATGGAGCTTATAATAGGACATAATGGTCTTGAGAGACTTGGTATTGGTAGTAAATCAAC
TCAGGGTGGTGGGGCACCAGGAGGAATGGATGGGAAAAATCAGCAAAAAACTGATGGGACTTCCAGTGCAACTAAAAACA
AAAATTCAGAGCAAACATCAAAGGAGAATGGGCAAACTGGAGGAGAGACACCATCAATAGACAATGATCAAATGCAAGGA
CAACCTCCATCAATGGATAATGGAGAAATGCAAGGGGCACCTCCTAATACTCAAGATGGAGGAAAAGGGAATGCTAATCC
TCCTAATGGTGATGGAAAAGGTCCCGGTGGAATGCCTCCAGGAGATAATGGAATACAGAAGCCTAATGGAGGAGGAATGG
GAGGAACCTTTGGAGGCCAAGAAGTTGCAAGTATTGCTAGATTATTCTCTAATAATAGCTTATCAGACCAAATTATTTGG
TTATTTCCTCTTGCTGTGTTTGGATTTATAGCAGCGGCAATAAAAGAAAAGCTAAATAAGACTTCTGATAATAAAAGAAA
GTTGTCATTAGTACTGTGGAGTATGTGGTTATTACCTGAATTTATATACTTCAGTTTTACAAAAGGGCTATTCCACCCTT
ATTATTTAACTATGCTAGCTCCACCAATTTCAGCTTTAGTAGGAATTGGAGTTGTATCAATGTGGAAGCTATATAATGAG
AATGGCTGGAAGTCTTGGATTTTACCAGTAGCACTTATCGCAGATGGATTAACTCAGATATTAATATTATCTTATTATTA
TAATATATCAAATACGGCCAAAATTTTAACCACAATAGTAGCAGTTTTATGTATTGTAGTTTCAATCGTACTTTCTATAA
TTAATTTAAGTAAAAATAAAAAAGGTATATTAAAATTTAGAAACATAAAACTAAAAAAATCACTGGTTACTATTGCTTTA
ATGGGGCTTTTAATAACTCCTTTAGTTTGCTCTACTACTACAATTTTTTATCCAGTATCTGGTACTTTCCCATCTGCTGG
ATTATCATTAATGACTAATAAGCAAAAAGATGGTTTTAATATGGGTGATCCTAATAGTGGTAATACAAAGCTAATAGAAT
TTCTAAAGAGTCATAAAACAAATGAAAAATATCTTCTTGTTACTTCATCCACTAATGGGTATGCTTCAGATATAATTATC
AATACTGGAGAATCCGTAATGGCACTCGGAGGTTTCTTTGGAACAGATAAAGTAATTGATTTAGATGAATTCAAAAAGTT
AGTTAATAATGGAGAAATTAGATATGTAATGGTAGGTGGTATGGGAGGCAACTCAAGTAGTGATATTATGAACTGGGTTA
AAGAAAATGGTAAAGTTGTTTCAGAAAGTGAATGGAAAGATTCAAATGAGATAAATAGTGAAGAAGTTAATAAGGATAAC
AATAATAAAGAAAACTCAAACTCAAATACTAAACAATTCGGCCAAGAAGGAAAAGGGAATTCTGAACAGTTATACGATTT
AAAAAATTATACTGATACTACAACAAAAAAATAG

Upstream 100 bases:

>100_bases
AAGATAACATGTAAATAAACATATAAAAAATAAGAAATACTTAATTTTAGAAATGAATAAAGTGAAAACTAACATATATT
TTGAGTGGGGGATATAAATA

Downstream 100 bases:

>100_bases
TTAATTATATATAAGGAAGCTTAGCATATAATGTTTCAACCCCACCACAGAAATGTGGTGGGGTTTATGTATTTAATACT
CTATTTTTTAAGTATATAAA

Product: dolichyl-phosphate-mannose-protein mannosyltransferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 757; Mature: 757

Protein sequence:

>757_residues
MKKIKFTKENIALSLILILSLILNLANLNIEGYANQYYAAGVKSMTLSLKNFFFISFDPASFVSIDKPPLGFWIQAIFAK
IFGFSGWSIILPQAIAGVVSVGLIYVIVKRRFGTAAGLISAICLAVTPVFVAVSRNNTCDNLLVLTLLLACLVLSKAAEK
GKLKYLLISLAIIGIGFNIKMLQAYMIIPAIYITYLLSNAVSFKKRIVHLMAGTIILILVSLSWAFIVDLIPEGNRPYVG
SSTNNSVMELIIGHNGLERLGIGSKSTQGGGAPGGMDGKNQQKTDGTSSATKNKNSEQTSKENGQTGGETPSIDNDQMQG
QPPSMDNGEMQGAPPNTQDGGKGNANPPNGDGKGPGGMPPGDNGIQKPNGGGMGGTFGGQEVASIARLFSNNSLSDQIIW
LFPLAVFGFIAAAIKEKLNKTSDNKRKLSLVLWSMWLLPEFIYFSFTKGLFHPYYLTMLAPPISALVGIGVVSMWKLYNE
NGWKSWILPVALIADGLTQILILSYYYNISNTAKILTTIVAVLCIVVSIVLSIINLSKNKKGILKFRNIKLKKSLVTIAL
MGLLITPLVCSTTTIFYPVSGTFPSAGLSLMTNKQKDGFNMGDPNSGNTKLIEFLKSHKTNEKYLLVTSSTNGYASDIII
NTGESVMALGGFFGTDKVIDLDEFKKLVNNGEIRYVMVGGMGGNSSSDIMNWVKENGKVVSESEWKDSNEINSEEVNKDN
NNKENSNSNTKQFGQEGKGNSEQLYDLKNYTDTTTKK

Sequences:

>Translated_757_residues
MKKIKFTKENIALSLILILSLILNLANLNIEGYANQYYAAGVKSMTLSLKNFFFISFDPASFVSIDKPPLGFWIQAIFAK
IFGFSGWSIILPQAIAGVVSVGLIYVIVKRRFGTAAGLISAICLAVTPVFVAVSRNNTCDNLLVLTLLLACLVLSKAAEK
GKLKYLLISLAIIGIGFNIKMLQAYMIIPAIYITYLLSNAVSFKKRIVHLMAGTIILILVSLSWAFIVDLIPEGNRPYVG
SSTNNSVMELIIGHNGLERLGIGSKSTQGGGAPGGMDGKNQQKTDGTSSATKNKNSEQTSKENGQTGGETPSIDNDQMQG
QPPSMDNGEMQGAPPNTQDGGKGNANPPNGDGKGPGGMPPGDNGIQKPNGGGMGGTFGGQEVASIARLFSNNSLSDQIIW
LFPLAVFGFIAAAIKEKLNKTSDNKRKLSLVLWSMWLLPEFIYFSFTKGLFHPYYLTMLAPPISALVGIGVVSMWKLYNE
NGWKSWILPVALIADGLTQILILSYYYNISNTAKILTTIVAVLCIVVSIVLSIINLSKNKKGILKFRNIKLKKSLVTIAL
MGLLITPLVCSTTTIFYPVSGTFPSAGLSLMTNKQKDGFNMGDPNSGNTKLIEFLKSHKTNEKYLLVTSSTNGYASDIII
NTGESVMALGGFFGTDKVIDLDEFKKLVNNGEIRYVMVGGMGGNSSSDIMNWVKENGKVVSESEWKDSNEINSEEVNKDN
NNKENSNSNTKQFGQEGKGNSEQLYDLKNYTDTTTKK
>Mature_757_residues
MKKIKFTKENIALSLILILSLILNLANLNIEGYANQYYAAGVKSMTLSLKNFFFISFDPASFVSIDKPPLGFWIQAIFAK
IFGFSGWSIILPQAIAGVVSVGLIYVIVKRRFGTAAGLISAICLAVTPVFVAVSRNNTCDNLLVLTLLLACLVLSKAAEK
GKLKYLLISLAIIGIGFNIKMLQAYMIIPAIYITYLLSNAVSFKKRIVHLMAGTIILILVSLSWAFIVDLIPEGNRPYVG
SSTNNSVMELIIGHNGLERLGIGSKSTQGGGAPGGMDGKNQQKTDGTSSATKNKNSEQTSKENGQTGGETPSIDNDQMQG
QPPSMDNGEMQGAPPNTQDGGKGNANPPNGDGKGPGGMPPGDNGIQKPNGGGMGGTFGGQEVASIARLFSNNSLSDQIIW
LFPLAVFGFIAAAIKEKLNKTSDNKRKLSLVLWSMWLLPEFIYFSFTKGLFHPYYLTMLAPPISALVGIGVVSMWKLYNE
NGWKSWILPVALIADGLTQILILSYYYNISNTAKILTTIVAVLCIVVSIVLSIINLSKNKKGILKFRNIKLKKSLVTIAL
MGLLITPLVCSTTTIFYPVSGTFPSAGLSLMTNKQKDGFNMGDPNSGNTKLIEFLKSHKTNEKYLLVTSSTNGYASDIII
NTGESVMALGGFFGTDKVIDLDEFKKLVNNGEIRYVMVGGMGGNSSSDIMNWVKENGKVVSESEWKDSNEINSEEVNKDN
NNKENSNSNTKQFGQEGKGNSEQLYDLKNYTDTTTKK

Specific function: Unknown

COG id: COG1807

COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 39 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003342 [H]

Pfam domain/function: PF02366 PMT [H]

EC number: NA

Molecular weight: Translated: 81911; Mature: 81911

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIKFTKENIALSLILILSLILNLANLNIEGYANQYYAAGVKSMTLSLKNFFFISFDPA
CCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHEEECEEEEEEECCC
SFVSIDKPPLGFWIQAIFAKIFGFSGWSIILPQAIAGVVSVGLIYVIVKRRFGTAAGLIS
CEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
AICLAVTPVFVAVSRNNTCDNLLVLTLLLACLVLSKAAEKGKLKYLLISLAIIGIGFNIK
HHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHH
MLQAYMIIPAIYITYLLSNAVSFKKRIVHLMAGTIILILVSLSWAFIVDLIPEGNRPYVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SSTNNSVMELIIGHNGLERLGIGSKSTQGGGAPGGMDGKNQQKTDGTSSATKNKNSEQTS
CCCCCHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
KENGQTGGETPSIDNDQMQGQPPSMDNGEMQGAPPNTQDGGKGNANPPNGDGKGPGGMPP
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GDNGIQKPNGGGMGGTFGGQEVASIARLFSNNSLSDQIIWLFPLAVFGFIAAAIKEKLNK
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
TSDNKRKLSLVLWSMWLLPEFIYFSFTKGLFHPYYLTMLAPPISALVGIGVVSMWKLYNE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NGWKSWILPVALIADGLTQILILSYYYNISNTAKILTTIVAVLCIVVSIVLSIINLSKNK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KGILKFRNIKLKKSLVTIALMGLLITPLVCSTTTIFYPVSGTFPSAGLSLMTNKQKDGFN
CCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHEECCCCCCCC
MGDPNSGNTKLIEFLKSHKTNEKYLLVTSSTNGYASDIIINTGESVMALGGFFGTDKVID
CCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHCCCCCCCCEEC
LDEFKKLVNNGEIRYVMVGGMGGNSSSDIMNWVKENGKVVSESEWKDSNEINSEEVNKDN
HHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCHHHCCCCC
NNKENSNSNTKQFGQEGKGNSEQLYDLKNYTDTTTKK
CCCCCCCCCHHHHCCCCCCCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKKIKFTKENIALSLILILSLILNLANLNIEGYANQYYAAGVKSMTLSLKNFFFISFDPA
CCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHEEECEEEEEEECCC
SFVSIDKPPLGFWIQAIFAKIFGFSGWSIILPQAIAGVVSVGLIYVIVKRRFGTAAGLIS
CEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
AICLAVTPVFVAVSRNNTCDNLLVLTLLLACLVLSKAAEKGKLKYLLISLAIIGIGFNIK
HHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHH
MLQAYMIIPAIYITYLLSNAVSFKKRIVHLMAGTIILILVSLSWAFIVDLIPEGNRPYVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SSTNNSVMELIIGHNGLERLGIGSKSTQGGGAPGGMDGKNQQKTDGTSSATKNKNSEQTS
CCCCCHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
KENGQTGGETPSIDNDQMQGQPPSMDNGEMQGAPPNTQDGGKGNANPPNGDGKGPGGMPP
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GDNGIQKPNGGGMGGTFGGQEVASIARLFSNNSLSDQIIWLFPLAVFGFIAAAIKEKLNK
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
TSDNKRKLSLVLWSMWLLPEFIYFSFTKGLFHPYYLTMLAPPISALVGIGVVSMWKLYNE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NGWKSWILPVALIADGLTQILILSYYYNISNTAKILTTIVAVLCIVVSIVLSIINLSKNK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KGILKFRNIKLKKSLVTIALMGLLITPLVCSTTTIFYPVSGTFPSAGLSLMTNKQKDGFN
CCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHEECCCCCCCC
MGDPNSGNTKLIEFLKSHKTNEKYLLVTSSTNGYASDIIINTGESVMALGGFFGTDKVID
CCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHCCCCCCCCEEC
LDEFKKLVNNGEIRYVMVGGMGGNSSSDIMNWVKENGKVVSESEWKDSNEINSEEVNKDN
HHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCHHHCCCCC
NNKENSNSNTKQFGQEGKGNSEQLYDLKNYTDTTTKK
CCCCCCCCCHHHHCCCCCCCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]