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The map label for this gene is ubiE [H]

Identifier: 153935218

GI number: 153935218

Start: 528842

End: 529570

Strand: Direct

Name: ubiE [H]

Synonym: CLC_0521

Alternate gene names: 153935218

Gene position: 528842-529570 (Clockwise)

Preceding gene: 153935314

Following gene: 153937340

Centisome position: 14.06

GC content: 26.47

Gene sequence:

>729_bases
ATGAAGAAATATACAAAGCCATATTATGGCCCAAATAATTATTTTAGTGTTATTAAGTTTTTTTCTGCAGGAATTCTAGG
CTTGATAACTTTTATGTTTCTTCTTCAGCATAAAGAAATAAAAAGTTATATAGCTTATTTTATATTATTCATATCAATAT
TATTTATAGCTAATGGTTTAAGAATAGTAAACTTTATATTTGCAGGAAGATTTAAGCACATAGGTAGAATAATTTCTAAG
GTTAATTGGACAGGGAATGAAAATGTATTAGATGTAGGTGTTGGAAAAGGAATTTTAGCTATAGCAGTGGCTAAAAAGCT
GAAGAATGGATCAGGAAAAGTAATTGGTATAGATATATGGGATAGTGAAGATATAATGGATAATACTAAATATTATGTGA
ATCAAAATATAGAATTAGAAGGTGTAGCGGATAAAGTTAAGATAAAAACTCAAAATGCCTCAGCTTTATCCTTTAAGAAT
GAAACCTTTGATGTAATTGTAAGTAAACAATGTATTCACAATATAGAAGATAAACAAGAGAGAAAAATGGCCATAGAAGA
AATGTTAAGAGTTTTAAAAACAGGTGGGAAATTAATAATCTCAGATTCTATGTATATAGATGAATATGAAAAAATATTAT
TAGACAAAGGATTAAAGGTAAATATATCTTCAAAATACTTTTTAGATACGTATCCTGCTTCAAGCATATTAGAAGTTACT
AAAAAGTAA

Upstream 100 bases:

>100_bases
ACATAAATGAATAAAAAATTTTTTCTTGAAAATCTTTTTTATTAATGATAAAATCTACAATTATCAATGGGAGGAAATTA
AGAAGGGAGTGTTATATAAT

Downstream 100 bases:

>100_bases
CTATTAATTTAATTATTATATTTTAAAATTTATTTTAAAAATAGGGTTAATGTTAATTTGTATAAACAGAGTTCTTGGCT
GCAGATGGAGTTTTTACTCA

Product: hypothetical protein

Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MKKYTKPYYGPNNYFSVIKFFSAGILGLITFMFLLQHKEIKSYIAYFILFISILFIANGLRIVNFIFAGRFKHIGRIISK
VNWTGNENVLDVGVGKGILAIAVAKKLKNGSGKVIGIDIWDSEDIMDNTKYYVNQNIELEGVADKVKIKTQNASALSFKN
ETFDVIVSKQCIHNIEDKQERKMAIEEMLRVLKTGGKLIISDSMYIDEYEKILLDKGLKVNISSKYFLDTYPASSILEVT
KK

Sequences:

>Translated_242_residues
MKKYTKPYYGPNNYFSVIKFFSAGILGLITFMFLLQHKEIKSYIAYFILFISILFIANGLRIVNFIFAGRFKHIGRIISK
VNWTGNENVLDVGVGKGILAIAVAKKLKNGSGKVIGIDIWDSEDIMDNTKYYVNQNIELEGVADKVKIKTQNASALSFKN
ETFDVIVSKQCIHNIEDKQERKMAIEEMLRVLKTGGKLIISDSMYIDEYEKILLDKGLKVNISSKYFLDTYPASSILEVT
KK
>Mature_242_residues
MKKYTKPYYGPNNYFSVIKFFSAGILGLITFMFLLQHKEIKSYIAYFILFISILFIANGLRIVNFIFAGRFKHIGRIISK
VNWTGNENVLDVGVGKGILAIAVAKKLKNGSGKVIGIDIWDSEDIMDNTKYYVNQNIELEGVADKVKIKTQNASALSFKN
ETFDVIVSKQCIHNIEDKQERKMAIEEMLRVLKTGGKLIISDSMYIDEYEKILLDKGLKVNISSKYFLDTYPASSILEVT
KK

Specific function: Methyltransferase required for the conversion of dimethylmenaquinone (DMKH2) to menaquinone (MKH2) [H]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. UbiE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004033 [H]

Pfam domain/function: PF01209 Ubie_methyltran [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 27509; Mature: 27509

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYTKPYYGPNNYFSVIKFFSAGILGLITFMFLLQHKEIKSYIAYFILFISILFIANGL
CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
RIVNFIFAGRFKHIGRIISKVNWTGNENVLDVGVGKGILAIAVAKKLKNGSGKVIGIDIW
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEC
DSEDIMDNTKYYVNQNIELEGVADKVKIKTQNASALSFKNETFDVIVSKQCIHNIEDKQE
CCCCHHCCCCEEECCCEEEECCCCEEEEEECCCCEEEECCCHHHHEECHHHHHCCCHHHH
RKMAIEEMLRVLKTGGKLIISDSMYIDEYEKILLDKGLKVNISSKYFLDTYPASSILEVT
HHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCEEEECCEEEEECCCCHHHHHHH
KK
CC
>Mature Secondary Structure
MKKYTKPYYGPNNYFSVIKFFSAGILGLITFMFLLQHKEIKSYIAYFILFISILFIANGL
CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
RIVNFIFAGRFKHIGRIISKVNWTGNENVLDVGVGKGILAIAVAKKLKNGSGKVIGIDIW
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEC
DSEDIMDNTKYYVNQNIELEGVADKVKIKTQNASALSFKNETFDVIVSKQCIHNIEDKQE
CCCCHHCCCCEEECCCEEEECCCCEEEEEECCCCEEEECCCHHHHEECHHHHHCCCHHHH
RKMAIEEMLRVLKTGGKLIISDSMYIDEYEKILLDKGLKVNISSKYFLDTYPASSILEVT
HHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCEEEECCEEEEECCCCHHHHHHH
KK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]

Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]

General reaction: Transferring one-carbon groups; Methyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12566566 [H]