| Definition | Clostridium botulinum A str. Hall, complete genome. |
|---|---|
| Accession | NC_009698 |
| Length | 3,760,560 |
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The map label for this gene is 153935198
Identifier: 153935198
GI number: 153935198
Start: 3035256
End: 3036185
Strand: Reverse
Name: 153935198
Synonym: CLC_2868
Alternate gene names: NA
Gene position: 3036185-3035256 (Counterclockwise)
Preceding gene: 153936989
Following gene: 153937064
Centisome position: 80.74
GC content: 31.08
Gene sequence:
>930_bases ATGTTAAAAAAAGGTGATAAAAATTCAGAGGAAGATAGTTTTGGACTAGTTGCCATAGCATCTACTGGTGCAATAATATC GGTTATGATTATGAATATTATTTCAAAAACTGATAAAATAACAGGGAGTCTTGAGTACCATGAATCAATGTCATCATCAA TTATTAGTCCTTTCATTGAAAAAATCCCAACAATAGCTGGAGAAGCTTTTTTAGCATTGATACCTATATTACTTATTTTT CTTGTGTTTCAAAAAGTTTCAATTAATCTATCTAAAAAGGATTTCAACAAAATTCTAATTGGGCTTTTATTTACATTTAT AGGATTAATTTTATTCTTAGTTGGTGTTAATGCTGGGTTTATGGACGTAGGAAGTGCTATTGGATATGAAATAGCATCTC TAGATAGTAAAGCTTACGTTATTATTATAGGATTTATTTTGGGAGTTGTTACAATATTTGCTGAGCCAGCTGTTTATGTA TTAATGCATCAGATAGAAGAAGTTACAAGTGGACATGTAAATAGAAAAGCAGTAATGTTTACACTTTCTATAGGGGTTGG ACTTGCAGTTGCTTTATCTATGTTAAGAATACTTATTCCTCAAATTCAATTGTGGCATTATCTATTGCCTGGTTATCTAA TTTCTGTAATAATGACTTATTTTGTACCAAATTTATTTGTGGGAATTGCATTTGATTCAGGAGGAGTTGCATCTGGACCA ATGACAGCAACTTTTATATTAGCATTCGCACAAGGTGTTGCCGAATCAATAGAAGGGGCAAATGTATTAGTAGATGGGTT TGGAGTAATTGCAATGGTAGCCTTAACTCCTTTAATTGCTTTACAGGTTTTAGGTTTTATTTTTAAAATAAAGTCTGAAA AGGAAGATGCTAAAAATATTGAATCATCTCAAGAATGTATCTCATCTTAG
Upstream 100 bases:
>100_bases TACGTCAAAAGAGTTTTTAGCAATATCTTTTGATGCTTCTGGCGCCACTACTGGTGCGATGACAGTTCCATTTATTCTAG CTCTTGCAATGGGAGTTGCT
Downstream 100 bases:
>100_bases AATTGTTTTTTAGCTTAAGTTTAAGACACATATAAGTTTTAAGTAATGATATTTAAAAGTAATTTAGCATAGGTATAATA ATAGTTACAGGTGCTTATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MLKKGDKNSEEDSFGLVAIASTGAIISVMIMNIISKTDKITGSLEYHESMSSSIISPFIEKIPTIAGEAFLALIPILLIF LVFQKVSINLSKKDFNKILIGLLFTFIGLILFLVGVNAGFMDVGSAIGYEIASLDSKAYVIIIGFILGVVTIFAEPAVYV LMHQIEEVTSGHVNRKAVMFTLSIGVGLAVALSMLRILIPQIQLWHYLLPGYLISVIMTYFVPNLFVGIAFDSGGVASGP MTATFILAFAQGVAESIEGANVLVDGFGVIAMVALTPLIALQVLGFIFKIKSEKEDAKNIESSQECISS
Sequences:
>Translated_309_residues MLKKGDKNSEEDSFGLVAIASTGAIISVMIMNIISKTDKITGSLEYHESMSSSIISPFIEKIPTIAGEAFLALIPILLIF LVFQKVSINLSKKDFNKILIGLLFTFIGLILFLVGVNAGFMDVGSAIGYEIASLDSKAYVIIIGFILGVVTIFAEPAVYV LMHQIEEVTSGHVNRKAVMFTLSIGVGLAVALSMLRILIPQIQLWHYLLPGYLISVIMTYFVPNLFVGIAFDSGGVASGP MTATFILAFAQGVAESIEGANVLVDGFGVIAMVALTPLIALQVLGFIFKIKSEKEDAKNIESSQECISS >Mature_309_residues MLKKGDKNSEEDSFGLVAIASTGAIISVMIMNIISKTDKITGSLEYHESMSSSIISPFIEKIPTIAGEAFLALIPILLIF LVFQKVSINLSKKDFNKILIGLLFTFIGLILFLVGVNAGFMDVGSAIGYEIASLDSKAYVIIIGFILGVVTIFAEPAVYV LMHQIEEVTSGHVNRKAVMFTLSIGVGLAVALSMLRILIPQIQLWHYLLPGYLISVIMTYFVPNLFVGIAFDSGGVASGP MTATFILAFAQGVAESIEGANVLVDGFGVIAMVALTPLIALQVLGFIFKIKSEKEDAKNIESSQECISS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33168; Mature: 33168
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKGDKNSEEDSFGLVAIASTGAIISVMIMNIISKTDKITGSLEYHESMSSSIISPFIE CCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH KIPTIAGEAFLALIPILLIFLVFQKVSINLSKKDFNKILIGLLFTFIGLILFLVGVNAGF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH MDVGSAIGYEIASLDSKAYVIIIGFILGVVTIFAEPAVYVLMHQIEEVTSGHVNRKAVMF HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCEEEE TLSIGVGLAVALSMLRILIPQIQLWHYLLPGYLISVIMTYFVPNLFVGIAFDSGGVASGP EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCC MTATFILAFAQGVAESIEGANVLVDGFGVIAMVALTPLIALQVLGFIFKIKSEKEDAKNI HHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC ESSQECISS HHHHHHHCC >Mature Secondary Structure MLKKGDKNSEEDSFGLVAIASTGAIISVMIMNIISKTDKITGSLEYHESMSSSIISPFIE CCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH KIPTIAGEAFLALIPILLIFLVFQKVSINLSKKDFNKILIGLLFTFIGLILFLVGVNAGF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH MDVGSAIGYEIASLDSKAYVIIIGFILGVVTIFAEPAVYVLMHQIEEVTSGHVNRKAVMF HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCEEEE TLSIGVGLAVALSMLRILIPQIQLWHYLLPGYLISVIMTYFVPNLFVGIAFDSGGVASGP EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCC MTATFILAFAQGVAESIEGANVLVDGFGVIAMVALTPLIALQVLGFIFKIKSEKEDAKNI HHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC ESSQECISS HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA