| Definition | Clostridium botulinum A str. Hall, complete genome. |
|---|---|
| Accession | NC_009698 |
| Length | 3,760,560 |
Click here to switch to the map view.
The map label for this gene is 153935167
Identifier: 153935167
GI number: 153935167
Start: 3088803
End: 3090041
Strand: Reverse
Name: 153935167
Synonym: CLC_2924
Alternate gene names: NA
Gene position: 3090041-3088803 (Counterclockwise)
Preceding gene: 153935771
Following gene: 153937065
Centisome position: 82.17
GC content: 28.57
Gene sequence:
>1239_bases ATGGCTACAGATAATTTTTATTTTGTTGAAGGAAATACAAGTGTAAAAAACTTAGTAAAAACATTAGCAGCTGAAATAAC ACAAAATTCAGGTATATATAAATGGGATTTAGTTTATCCAGATAGCATAAATAAAATAGGGTCAGCAGGAGAAGGAAGTA CAATAAATCTTATAAAAGATAACTCTAAGACAGATAAAGTAGATACTGTATTTACAGTAGGTTCTCAAAATGATAAGTGT ATTATAAAAGCAACAACAACCTATGGAAAAGAGTTTTATGTAAAAATAGATAGAGAAGAAGCGGACTTAACAAAAGAAGA AAAAAAGGCATTAATTGACTTTAATAAGTTGCATACTTATTATAACGGCAATGGGGATAGTTTTAGTAGAACAGATGCAC AAGTATTAGAAATGATGGCTGGAGTTTCTGATAGATGGAGTAAAAGTGGTGATTATGATGTTTATGTCAGTGCTATGACT AAAAGCAATTCTATAAACAATATAAAATTGCAAATATCAGATAAATTAAACGCAGATAAAACAGATCTAGGTATATCTAA AAATATACAAGCTGAATATAATTATAGATTAGCATGGTATAGAAAATTACAACCAGAAATAAAAGACTTTTTACCCGTTC AATATTGGATAAATGTAACTAAAGATAGTATAAACTTAGTATTATGTGGAGATCCATCTGCGGATGTTCATCCTTATGAA AACTATCTTACATCTTATGCTTATATTGGAGCTTTAAAACCAGTAGAGGATTCAGCTTATACAGATGATAAATATAATTT TGGTATAACTGTATCTTCTGATATAGAACCAAATTATTCAAAGGTTTATGGAGAAAGAACTGCAACAGGAGTAACAGATG TTTGTATGATAGCTAATAAAATAGGTATGCCATATCAACCACATTATCCAGCTTTTTATGCTACTAATCCTTTTATGGAT AAATGTAATGTAGAAGGTAGTAGATATAATCATAAAAAACATCAATTCTCAGATATAACACTTGTACATCCAGTTGATAT GGAAAGAGGTAAAATGATTAATGTACTTGTAGGTGATGCCAGTGCAATAAACGATACAGATAGATTAGCATATAAGAAAG ATACAGAAGAGGAAGAATATTATAAGAAATTTAAAATTACTGCGCCATATTGTTTCTTAAACAATAGTGCTAATATAAAT TATTGTGTTGCTATTAGATGTTATAAAACAACTAAATAA
Upstream 100 bases:
>100_bases TTAGATACAAATAGAGATTTAAAAGATATATTTATAATGGACTTAAATACTTTAAAAATAACAAATTTAAATAAATAATT GATAACAGGAGGTAGATAAA
Downstream 100 bases:
>100_bases GAGAGGTGGTATAAATGCCCCTACATAAAATACCCCTATGTAGTTTTGAATATGTAGGGGACAATGCTTTTTCTAGTGGA ACTTTTATATACGATACTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MATDNFYFVEGNTSVKNLVKTLAAEITQNSGIYKWDLVYPDSINKIGSAGEGSTINLIKDNSKTDKVDTVFTVGSQNDKC IIKATTTYGKEFYVKIDREEADLTKEEKKALIDFNKLHTYYNGNGDSFSRTDAQVLEMMAGVSDRWSKSGDYDVYVSAMT KSNSINNIKLQISDKLNADKTDLGISKNIQAEYNYRLAWYRKLQPEIKDFLPVQYWINVTKDSINLVLCGDPSADVHPYE NYLTSYAYIGALKPVEDSAYTDDKYNFGITVSSDIEPNYSKVYGERTATGVTDVCMIANKIGMPYQPHYPAFYATNPFMD KCNVEGSRYNHKKHQFSDITLVHPVDMERGKMINVLVGDASAINDTDRLAYKKDTEEEEYYKKFKITAPYCFLNNSANIN YCVAIRCYKTTK
Sequences:
>Translated_412_residues MATDNFYFVEGNTSVKNLVKTLAAEITQNSGIYKWDLVYPDSINKIGSAGEGSTINLIKDNSKTDKVDTVFTVGSQNDKC IIKATTTYGKEFYVKIDREEADLTKEEKKALIDFNKLHTYYNGNGDSFSRTDAQVLEMMAGVSDRWSKSGDYDVYVSAMT KSNSINNIKLQISDKLNADKTDLGISKNIQAEYNYRLAWYRKLQPEIKDFLPVQYWINVTKDSINLVLCGDPSADVHPYE NYLTSYAYIGALKPVEDSAYTDDKYNFGITVSSDIEPNYSKVYGERTATGVTDVCMIANKIGMPYQPHYPAFYATNPFMD KCNVEGSRYNHKKHQFSDITLVHPVDMERGKMINVLVGDASAINDTDRLAYKKDTEEEEYYKKFKITAPYCFLNNSANIN YCVAIRCYKTTK >Mature_411_residues ATDNFYFVEGNTSVKNLVKTLAAEITQNSGIYKWDLVYPDSINKIGSAGEGSTINLIKDNSKTDKVDTVFTVGSQNDKCI IKATTTYGKEFYVKIDREEADLTKEEKKALIDFNKLHTYYNGNGDSFSRTDAQVLEMMAGVSDRWSKSGDYDVYVSAMTK SNSINNIKLQISDKLNADKTDLGISKNIQAEYNYRLAWYRKLQPEIKDFLPVQYWINVTKDSINLVLCGDPSADVHPYEN YLTSYAYIGALKPVEDSAYTDDKYNFGITVSSDIEPNYSKVYGERTATGVTDVCMIANKIGMPYQPHYPAFYATNPFMDK CNVEGSRYNHKKHQFSDITLVHPVDMERGKMINVLVGDASAINDTDRLAYKKDTEEEEYYKKFKITAPYCFLNNSANINY CVAIRCYKTTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46749; Mature: 46618
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATDNFYFVEGNTSVKNLVKTLAAEITQNSGIYKWDLVYPDSINKIGSAGEGSTINLIKD CCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHCCCCCCCEEEEEEC NSKTDKVDTVFTVGSQNDKCIIKATTTYGKEFYVKIDREEADLTKEEKKALIDFNKLHTY CCCCCCEEEEEEECCCCCEEEEEEECCCCEEEEEEEECCHHCCCHHHHHHHEEHHHEEEE YNGNGDSFSRTDAQVLEMMAGVSDRWSKSGDYDVYVSAMTKSNSINNIKLQISDKLNADK ECCCCCCCCCHHHHHHHHHHCCCHHCCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCC TDLGISKNIQAEYNYRLAWYRKLQPEIKDFLPVQYWINVTKDSINLVLCGDPSADVHPYE CCCCCCCCCEEEEEEEEEEEECCCHHHHHCCCEEEEEEEECCCEEEEEECCCCCCCCCHH NYLTSYAYIGALKPVEDSAYTDDKYNFGITVSSDIEPNYSKVYGERTATGVTDVCMIANK HHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHCCCCCCCCHHHHHHHHHH IGMPYQPHYPAFYATNPFMDKCNVEGSRYNHKKHQFSDITLVHPVDMERGKMINVLVGDA CCCCCCCCCCEEEECCCCCHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCC SAINDTDRLAYKKDTEEEEYYKKFKITAPYCFLNNSANINYCVAIRCYKTTK CCCCCCHHEEECCCCCHHHHHHEEEEECCEEEECCCCCEEEEEEEEEEECCC >Mature Secondary Structure ATDNFYFVEGNTSVKNLVKTLAAEITQNSGIYKWDLVYPDSINKIGSAGEGSTINLIKD CCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHCCCCCCCEEEEEEC NSKTDKVDTVFTVGSQNDKCIIKATTTYGKEFYVKIDREEADLTKEEKKALIDFNKLHTY CCCCCCEEEEEEECCCCCEEEEEEECCCCEEEEEEEECCHHCCCHHHHHHHEEHHHEEEE YNGNGDSFSRTDAQVLEMMAGVSDRWSKSGDYDVYVSAMTKSNSINNIKLQISDKLNADK ECCCCCCCCCHHHHHHHHHHCCCHHCCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCC TDLGISKNIQAEYNYRLAWYRKLQPEIKDFLPVQYWINVTKDSINLVLCGDPSADVHPYE CCCCCCCCCEEEEEEEEEEEECCCHHHHHCCCEEEEEEEECCCEEEEEECCCCCCCCCHH NYLTSYAYIGALKPVEDSAYTDDKYNFGITVSSDIEPNYSKVYGERTATGVTDVCMIANK HHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHCCCCCCCCHHHHHHHHHH IGMPYQPHYPAFYATNPFMDKCNVEGSRYNHKKHQFSDITLVHPVDMERGKMINVLVGDA CCCCCCCCCCEEEECCCCCHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCC SAINDTDRLAYKKDTEEEEYYKKFKITAPYCFLNNSANINYCVAIRCYKTTK CCCCCCHHEEECCCCCHHHHHHEEEEECCEEEECCCCCEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA