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The map label for this gene is yhaM [C]

Identifier: 153935143

GI number: 153935143

Start: 2023850

End: 2025142

Strand: Direct

Name: yhaM [C]

Synonym: CLC_1909

Alternate gene names: 153935143

Gene position: 2023850-2025142 (Clockwise)

Preceding gene: 153937836

Following gene: 153936089

Centisome position: 53.82

GC content: 46.17

Gene sequence:

>1293_bases
ATGCTAACAAAAGAAAATTTATTAGCCTTATTAAAGCAGGAGGTTGTTCCTGCTCTCGGATGTACCGAACCTGTCTGTGT
AGCCCTGGCTACGGCAGACGCCTATCATGCCATAGGAGGCAGAATTGTTTCTATTAAAATAGAAGTAAATCCTGGTATCT
ATAAAAATGGAATGTCTGTAGGCATCCCCGGCTTCGACCGCGTAGGCCTTAAATATGCGGCCTCACTAGGAGCAGTCATA
GGAAATCCTGAGAAGAAGCTAGAGCTTTTAGAGGATATCACAGCAGAGGTAAGCCAAAAAGCCATAAAAATTGTAGAAAA
CAGCCAGGTTGTAGTAGTAATTAAGCATGAAGAAGCTCAGTTATACGTACGGGCGGAAATCATCACCACTGCTGGAATGG
GCATCAGCGAAATTCGTGGCACCCATTCCAATATCATTTTTACCAAACGAAATAATGATATGCTTCTGCAGAAGGAATAC
TCTGTCGACTCTGACGATTCCCTTCATCAGCAGCTGAAGCTTATGGGCATAGCTGAAATCCGTAAGTTGATTGACGAGTG
CAAGGAAGAAGAGCTGTCCTTCCTATTAGACGGCGTTGATATGAATGAAAGGCTAGCAGACTATGGTCTGGAGCATTCTC
TTGGAATCGGCATCGCTTCTGCCCTGCAGGAAAAAATGACCACAGATATTATGGGAGATAATTTATTCAGCCGAACTATG
CTCCGCGTTGCTAGTAGCGCCGAAGGTCGTATGAGCGGCTGTCCCTACGCCGTCATGAGCAGTGCCGGCAGCGGCAATCA
CGGGATCACAGCTATTCTGCCCGTAACAGAAATGGCCCGTTACTTAAATTCCTCCAGAGAGCAGCTGGTAAAAGCACTGG
CATTTTCACACACTCTGAACGTTTATATCAAGCTTTTTACAGGCAAACTGTCTGCCACCTGCGGCTGTGGCGTATCCGCT
GCTACAGCAGCCTCAGCAGCTATGGTATGGCTAATGGGTGGGAATGAACACCAGATTGCCAATGCCATTATCAACATGAG
TGGAAATTTAACTGGTATGATTTGTGACGGCGGCAAAATCGGCTGTGCCTTAAAACTGGCTACCGCAACAAATGCAGCAT
TAATGTGCGCTTATCTGGCTATGTCTGACGTAGCGCTACAGCCATCAGACGGAATCTGCGATGTAACAGCGGAACAAGTT
ATCCGAAACATGGGACAAGTCAGCAATCCTGGCATGGTTGAAACAGACCAAACCATTCTCTCTATCATGATAGAGAAAGA
CCAGAGGAAGTAA

Upstream 100 bases:

>100_bases
TTTCTATTATAATCCCCTTATTTTTCTCTTATTCAAAAATTGGCATATTTTTTGCTCTATATAAAAAGTAAAAACCAAAC
CCTGAAAGGAGATTTTTCTA

Downstream 100 bases:

>100_bases
ACTGTGCCCTGTAAGATAGACACAGAAAAGAGGCTGTGTTAACTTACAGGGTACCTTTTTTCTTCCAATTTAAGCCTAAA
TTTTTATTAAGTAATCTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MLTKENLLALLKQEVVPALGCTEPVCVALATADAYHAIGGRIVSIKIEVNPGIYKNGMSVGIPGFDRVGLKYAASLGAVI
GNPEKKLELLEDITAEVSQKAIKIVENSQVVVVIKHEEAQLYVRAEIITTAGMGISEIRGTHSNIIFTKRNNDMLLQKEY
SVDSDDSLHQQLKLMGIAEIRKLIDECKEEELSFLLDGVDMNERLADYGLEHSLGIGIASALQEKMTTDIMGDNLFSRTM
LRVASSAEGRMSGCPYAVMSSAGSGNHGITAILPVTEMARYLNSSREQLVKALAFSHTLNVYIKLFTGKLSATCGCGVSA
ATAASAAMVWLMGGNEHQIANAIINMSGNLTGMICDGGKIGCALKLATATNAALMCAYLAMSDVALQPSDGICDVTAEQV
IRNMGQVSNPGMVETDQTILSIMIEKDQRK

Sequences:

>Translated_430_residues
MLTKENLLALLKQEVVPALGCTEPVCVALATADAYHAIGGRIVSIKIEVNPGIYKNGMSVGIPGFDRVGLKYAASLGAVI
GNPEKKLELLEDITAEVSQKAIKIVENSQVVVVIKHEEAQLYVRAEIITTAGMGISEIRGTHSNIIFTKRNNDMLLQKEY
SVDSDDSLHQQLKLMGIAEIRKLIDECKEEELSFLLDGVDMNERLADYGLEHSLGIGIASALQEKMTTDIMGDNLFSRTM
LRVASSAEGRMSGCPYAVMSSAGSGNHGITAILPVTEMARYLNSSREQLVKALAFSHTLNVYIKLFTGKLSATCGCGVSA
ATAASAAMVWLMGGNEHQIANAIINMSGNLTGMICDGGKIGCALKLATATNAALMCAYLAMSDVALQPSDGICDVTAEQV
IRNMGQVSNPGMVETDQTILSIMIEKDQRK
>Mature_430_residues
MLTKENLLALLKQEVVPALGCTEPVCVALATADAYHAIGGRIVSIKIEVNPGIYKNGMSVGIPGFDRVGLKYAASLGAVI
GNPEKKLELLEDITAEVSQKAIKIVENSQVVVVIKHEEAQLYVRAEIITTAGMGISEIRGTHSNIIFTKRNNDMLLQKEY
SVDSDDSLHQQLKLMGIAEIRKLIDECKEEELSFLLDGVDMNERLADYGLEHSLGIGIASALQEKMTTDIMGDNLFSRTM
LRVASSAEGRMSGCPYAVMSSAGSGNHGITAILPVTEMARYLNSSREQLVKALAFSHTLNVYIKLFTGKLSATCGCGVSA
ATAASAAMVWLMGGNEHQIANAIINMSGNLTGMICDGGKIGCALKLATATNAALMCAYLAMSDVALQPSDGICDVTAEQV
IRNMGQVSNPGMVETDQTILSIMIEKDQRK

Specific function: Unknown

COG id: COG3681

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0597 family

Homologues:

Organism=Escherichia coli, GI48994923, Length=428, Percent_Identity=33.8785046728972, Blast_Score=218, Evalue=8e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1903_CLOB1 (A7FV20)

Other databases:

- EMBL:   CP000726
- RefSeq:   YP_001384223.1
- STRING:   A7FV20
- GeneID:   5396896
- GenomeReviews:   CP000726_GR
- KEGG:   cba:CLB_1903
- eggNOG:   COG3681
- HOGENOM:   HBG296671
- OMA:   PVMSNSG
- ProtClustDB:   CLSK972092
- BioCyc:   CBOT441770:CLB_1903-MONOMER
- HAMAP:   MF_01845
- InterPro:   IPR005130
- InterPro:   IPR021144
- PIRSF:   PIRSF006054

Pfam domain/function: PF03313 SDH_alpha

EC number: NA

Molecular weight: Translated: 45995; Mature: 45995

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTKENLLALLKQEVVPALGCTEPVCVALATADAYHAIGGRIVSIKIEVNPGIYKNGMSV
CCCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHCCCEEEEEEEEECCCEEECCCEE
GIPGFDRVGLKYAASLGAVIGNPEKKLELLEDITAEVSQKAIKIVENSQVVVVIKHEEAQ
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEEECCCE
LYVRAEIITTAGMGISEIRGTHSNIIFTKRNNDMLLQKEYSVDSDDSLHQQLKLMGIAEI
EEEEEEEEEECCCCHHHHCCCCCCEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
RKLIDECKEEELSFLLDGVDMNERLADYGLEHSLGIGIASALQEKMTTDIMGDNLFSRTM
HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHCCHHHHHHH
LRVASSAEGRMSGCPYAVMSSAGSGNHGITAILPVTEMARYLNSSREQLVKALAFSHTLN
HHHHCCCCCCCCCCCHHHHCCCCCCCCCEEEEEEHHHHHHHHCCHHHHHHHHHHHHHHEE
VYIKLFTGKLSATCGCGVSAATAASAAMVWLMGGNEHQIANAIINMSGNLTGMICDGGKI
EEEEEEECCCCCCCCCCCHHHHHHCEEEEEEECCCCHHHHHHHEECCCCEEEEEECCCCE
GCALKLATATNAALMCAYLAMSDVALQPSDGICDVTAEQVIRNMGQVSNPGMVETDQTIL
EEEEEEECCCCHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHH
SIMIEKDQRK
HHHHHCCCCC
>Mature Secondary Structure
MLTKENLLALLKQEVVPALGCTEPVCVALATADAYHAIGGRIVSIKIEVNPGIYKNGMSV
CCCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHCCCEEEEEEEEECCCEEECCCEE
GIPGFDRVGLKYAASLGAVIGNPEKKLELLEDITAEVSQKAIKIVENSQVVVVIKHEEAQ
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEEECCCE
LYVRAEIITTAGMGISEIRGTHSNIIFTKRNNDMLLQKEYSVDSDDSLHQQLKLMGIAEI
EEEEEEEEEECCCCHHHHCCCCCCEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
RKLIDECKEEELSFLLDGVDMNERLADYGLEHSLGIGIASALQEKMTTDIMGDNLFSRTM
HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHCCHHHHHHH
LRVASSAEGRMSGCPYAVMSSAGSGNHGITAILPVTEMARYLNSSREQLVKALAFSHTLN
HHHHCCCCCCCCCCCHHHHCCCCCCCCCEEEEEEHHHHHHHHCCHHHHHHHHHHHHHHEE
VYIKLFTGKLSATCGCGVSAATAASAAMVWLMGGNEHQIANAIINMSGNLTGMICDGGKI
EEEEEEECCCCCCCCCCCHHHHHHCEEEEEEECCCCHHHHHHHEECCCCEEEEEECCCCE
GCALKLATATNAALMCAYLAMSDVALQPSDGICDVTAEQVIRNMGQVSNPGMVETDQTIL
EEEEEEECCCCHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHH
SIMIEKDQRK
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA