| Definition | Clostridium botulinum A str. Hall, complete genome. |
|---|---|
| Accession | NC_009698 |
| Length | 3,760,560 |
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The map label for this gene is ywaD [H]
Identifier: 153935137
GI number: 153935137
Start: 204027
End: 205391
Strand: Reverse
Name: ywaD [H]
Synonym: CLC_0229
Alternate gene names: 153935137
Gene position: 205391-204027 (Counterclockwise)
Preceding gene: 153935874
Following gene: 153937579
Centisome position: 5.46
GC content: 23.52
Gene sequence:
>1365_bases ATGAGAAATTTTGCCAAGCTATTTTATATAACTATTATTTTAACCCTTTTATGTTTTAGTATACAAACTACTTTATTTAT AAAATCATTTAATATAAACTCTGTACTCAACAATATTAATTTAATATCCTCTAATGAATTTAAGGGAAGACTTCCTGGTT CTATAGAAAATAGACAAGTTTCAGAATATATAAAAGATAATTTTAAAAGTAATAATCTACTTCCCTTTGAAGAAAACTAT TTTCATAGTTTTGGTTGTTTTTATCCTAGTAAGATTGAAGGTAATCCTTACTTGAAAGTAATAGATTCTCAAGGTAATTT AGTTAAAAATTATTCCTATGGTAAGGATTTTAAAGAAGATATGCTTAATTTTAGAGAAAATGCTTTTTCCTTTTCTAATG AAAATGTAATTATTCAAAATGATTTTATGAATATAAATTATAATGATGGTAATTTCCTTATATATTCTACAAATGATTAT GGTTCTAATTTTAGAAGTTCTTTTGTAAAAGAGGCTCCTTATAATATGTATATAGTTACAAACAAAAAAGTTTTTTCTGA AATAAAAGATTTTATAAAATCAGGCCATAAAATAATTTGCTTTATTCCTTATTCTATAAAAGAAACTGAGCTTAATAACG TTGTAGGATATATAAAAGGAATAAATCCTAACAATGATCCTATTATAATTTCTTCTCATTTTGATCATTTAGGTGAGGAT TTAAATGGGACTATATATAGTGGTGCTTTAGATAATGCCTCTGGTACTAGCTTCATGCTAGAATTAGTTAAATATATTAA ATCCTTAGGCACACCTAATAGGGATATTATATTTGTTTCTTTTAATGCAGAAGAATTTGGGTGTCTTGGATCTAAGGCTT TTGTAGATAAATATTACAGTAAAATAAAAAATTCTACATTATTAAATTTTGATATGATAGGAGGTAGTGAAAGCGTTCCT CTTTGCATAATGGGATCTGATAAAGATACCGCGAATACTCCTCTCATAAAAGAATTATCTGTCTTATGCTCTTTTAAAAA TATTAATTTTAATTATATGTTTGAAAATGCTAGTGATCATTATTTCTTTAGAGAAAAGGGAATAAATGCTATAACATTTT GTGATAATGATACTTCCAAAATTCATACTCCTAAAGATAAAATAGAGTTTATAAATAAAAATTCTATAAAAAGATGCTAC AATGTAGCATCATTAAAAATTATAAACTCCGCTTTTAGTGGAAATTTATTTTATATATACTATAAAGAAATTCTGATTAT ATCTTTTATATTACTTTTTGTATTTATAAAAAGACAACAAAGAAACAAAACAAAAATTATAAATTTAAATAAATATTTAT TATAA
Upstream 100 bases:
>100_bases TCCAAATATTAAATAAAGTCACTAAAAATATATTATACCAGTTATATATCCTTTGGCAAATTAATATAAATTAAATTATA AACAATTTATAGGAGATATT
Downstream 100 bases:
>100_bases GCTTTATAATTGGGAAAACCAAAAGGGATGTTTAAAAATAAAATAGATTTAATTTTTATTTTTATGATGTTAAAATTAAA TCTATTCTAAGACATCCCCT
Product: peptidase family protein
Products: NA
Alternate protein names: Arginyl aminopeptidase; BSAP; Leucyl aminopeptidase [H]
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MRNFAKLFYITIILTLLCFSIQTTLFIKSFNINSVLNNINLISSNEFKGRLPGSIENRQVSEYIKDNFKSNNLLPFEENY FHSFGCFYPSKIEGNPYLKVIDSQGNLVKNYSYGKDFKEDMLNFRENAFSFSNENVIIQNDFMNINYNDGNFLIYSTNDY GSNFRSSFVKEAPYNMYIVTNKKVFSEIKDFIKSGHKIICFIPYSIKETELNNVVGYIKGINPNNDPIIISSHFDHLGED LNGTIYSGALDNASGTSFMLELVKYIKSLGTPNRDIIFVSFNAEEFGCLGSKAFVDKYYSKIKNSTLLNFDMIGGSESVP LCIMGSDKDTANTPLIKELSVLCSFKNINFNYMFENASDHYFFREKGINAITFCDNDTSKIHTPKDKIEFINKNSIKRCY NVASLKIINSAFSGNLFYIYYKEILIISFILLFVFIKRQQRNKTKIINLNKYLL
Sequences:
>Translated_454_residues MRNFAKLFYITIILTLLCFSIQTTLFIKSFNINSVLNNINLISSNEFKGRLPGSIENRQVSEYIKDNFKSNNLLPFEENY FHSFGCFYPSKIEGNPYLKVIDSQGNLVKNYSYGKDFKEDMLNFRENAFSFSNENVIIQNDFMNINYNDGNFLIYSTNDY GSNFRSSFVKEAPYNMYIVTNKKVFSEIKDFIKSGHKIICFIPYSIKETELNNVVGYIKGINPNNDPIIISSHFDHLGED LNGTIYSGALDNASGTSFMLELVKYIKSLGTPNRDIIFVSFNAEEFGCLGSKAFVDKYYSKIKNSTLLNFDMIGGSESVP LCIMGSDKDTANTPLIKELSVLCSFKNINFNYMFENASDHYFFREKGINAITFCDNDTSKIHTPKDKIEFINKNSIKRCY NVASLKIINSAFSGNLFYIYYKEILIISFILLFVFIKRQQRNKTKIINLNKYLL >Mature_454_residues MRNFAKLFYITIILTLLCFSIQTTLFIKSFNINSVLNNINLISSNEFKGRLPGSIENRQVSEYIKDNFKSNNLLPFEENY FHSFGCFYPSKIEGNPYLKVIDSQGNLVKNYSYGKDFKEDMLNFRENAFSFSNENVIIQNDFMNINYNDGNFLIYSTNDY GSNFRSSFVKEAPYNMYIVTNKKVFSEIKDFIKSGHKIICFIPYSIKETELNNVVGYIKGINPNNDPIIISSHFDHLGED LNGTIYSGALDNASGTSFMLELVKYIKSLGTPNRDIIFVSFNAEEFGCLGSKAFVDKYYSKIKNSTLLNFDMIGGSESVP LCIMGSDKDTANTPLIKELSVLCSFKNINFNYMFENASDHYFFREKGINAITFCDNDTSKIHTPKDKIEFINKNSIKRCY NVASLKIINSAFSGNLFYIYYKEILIISFILLFVFIKRQQRNKTKIINLNKYLL
Specific function: Catalyzes the hydrolysis of a range of N-terminal amino acids [H]
COG id: COG2234
COG function: function code R; Predicted aminopeptidases
Gene ontology:
Cell location: Secreted (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M28 family. M28B subfamily [H]
Homologues:
Organism=Caenorhabditis elegans, GI71984813, Length=120, Percent_Identity=30.8333333333333, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007484 - InterPro: IPR003137 [H]
Pfam domain/function: PF02225 PA; PF04389 Peptidase_M28 [H]
EC number: =3.4.11.6; =3.4.11.10 [H]
Molecular weight: Translated: 52257; Mature: 52257
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNFAKLFYITIILTLLCFSIQTTLFIKSFNINSVLNNINLISSNEFKGRLPGSIENRQV CCHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHCCEEEECCCCCCCCCCCCCCHHH SEYIKDNFKSNNLLPFEENYFHSFGCFYPSKIEGNPYLKVIDSQGNLVKNYSYGKDFKED HHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHH MLNFRENAFSFSNENVIIQNDFMNINYNDGNFLIYSTNDYGSNFRSSFVKEAPYNMYIVT HHHHHHHHCCCCCCCEEEEECEEEEEECCCCEEEEECCCCCCHHHHHHHHCCCCEEEEEE NKKVFSEIKDFIKSGHKIICFIPYSIKETELNNVVGYIKGINPNNDPIIISSHFDHLGED CHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHCEEEEEECCCCCCCEEEEECCHHHCCCC LNGTIYSGALDNASGTSFMLELVKYIKSLGTPNRDIIFVSFNAEEFGCLGSKAFVDKYYS CCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHCCCCCHHHHHHHHH KIKNSTLLNFDMIGGSESVPLCIMGSDKDTANTPLIKELSVLCSFKNINFNYMFENASDH HHCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHEEEECCCEEEEECCCCCC YFFREKGINAITFCDNDTSKIHTPKDKIEFINKNSIKRCYNVASLKIINSAFSGNLFYIY EEEECCCCCEEEEECCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHEEEHHHCCCCEEEEH YKEILIISFILLFVFIKRQQRNKTKIINLNKYLL HHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHCC >Mature Secondary Structure MRNFAKLFYITIILTLLCFSIQTTLFIKSFNINSVLNNINLISSNEFKGRLPGSIENRQV CCHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHCCEEEECCCCCCCCCCCCCCHHH SEYIKDNFKSNNLLPFEENYFHSFGCFYPSKIEGNPYLKVIDSQGNLVKNYSYGKDFKED HHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHH MLNFRENAFSFSNENVIIQNDFMNINYNDGNFLIYSTNDYGSNFRSSFVKEAPYNMYIVT HHHHHHHHCCCCCCCEEEEECEEEEEECCCCEEEEECCCCCCHHHHHHHHCCCCEEEEEE NKKVFSEIKDFIKSGHKIICFIPYSIKETELNNVVGYIKGINPNNDPIIISSHFDHLGED CHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHCEEEEEECCCCCCCEEEEECCHHHCCCC LNGTIYSGALDNASGTSFMLELVKYIKSLGTPNRDIIFVSFNAEEFGCLGSKAFVDKYYS CCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHCCCCCHHHHHHHHH KIKNSTLLNFDMIGGSESVPLCIMGSDKDTANTPLIKELSVLCSFKNINFNYMFENASDH HHCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHEEEECCCEEEEECCCCCC YFFREKGINAITFCDNDTSKIHTPKDKIEFINKNSIKRCYNVASLKIINSAFSGNLFYIY EEEECCCCCEEEEECCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHEEEHHHCCCCEEEEH YKEILIISFILLFVFIKRQQRNKTKIINLNKYLL HHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377; 1806041 [H]