| Definition | Clostridium botulinum A str. Hall, complete genome. |
|---|---|
| Accession | NC_009698 |
| Length | 3,760,560 |
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The map label for this gene is ybdG [H]
Identifier: 153934815
GI number: 153934815
Start: 441348
End: 442319
Strand: Direct
Name: ybdG [H]
Synonym: CLC_0444
Alternate gene names: 153934815
Gene position: 441348-442319 (Clockwise)
Preceding gene: 153937570
Following gene: 153934876
Centisome position: 11.74
GC content: 31.58
Gene sequence:
>972_bases ATGAGCAAGATAGCAAAGAAAATTGGTATAGGTATCTTAGTAATTATTTGTATATTATTAATAATTATTTTAATTTCCTT TATTAATCATAAAGTTAAGTTAAAGAAAGAGTCTAAATTATTTGAACCGTTGGGCAAAATGGTTAAAGTTAATGGGCATT CTATGCATGTTTATACTGAAGGTAAGGGTGAAGTTACTTTAGTGTTTATGTCAGGAGGTGGAACCTGTTCTCCAACTTTG GATTTTAAAAGTTTGTATTCTCGATTAAGCGGCGATTATCGTATTGCAGTTGTAGAAAAAGCAGGATATGGTTTTAGTGA AATTATAGATATGCCAAGGGACATAGATACAGTTTTAGAAGAAACAAGAAAAGCGCTAAAGTTAGCTGGAGAAAAAGCTC CATATGTACTGTTTCCACATTCAATGTCTGGAATAGAGGCACTTTATTGGGTAGAAAAATATCCAGATGAAGTTGTAGGA ATCGTAGGATTAGATCCAGCTGTACCAAAGGCATATGATAATTATCCAATGCCAAATAAGATAGTTTTAAATCTGTCTCA ATTCGTAGCTAAAATTGGATTGACAAGATTCATTCCATCTATTTGTAATAGTTCAGCAGCAATCCAACAGGGTTCCTTAA CTGAACATGAAAAAGAAGTATATAGAGCAATTTTTTATAGAAGAACAGCTACAAAGACAATGTTAAATGAACTAAAGTGC ATTCAAGAAAGTGCAAAAAAAATTAATAAAATGGGCATACCAGAAGTTCCTATGCTATTTTTTATTTCAAATGGTAATGG TACAGGCTGGGGAAAAGAACAGTGGCAACAATCTTTAAAGGAATATATTTCAAAGGTCTCTATAAGTCAGCAAGTTTTAT TTGATTGTGGACACTATATTCATGATTATGAGTATGAAAGGATTGCACTTGAAAGCAAAGAATTTATTAAAAATATTGTA CTTGCAAAATAG
Upstream 100 bases:
>100_bases AAAGGAATAAAGAGATGGACAAAAAATTAGATATTATTATAAGTAAATTAGAGAATAAACAAAATAATTAGACCTTATGT GGAATAGAAAAGAGGAAGCA
Downstream 100 bases:
>100_bases ATATACTTAAAAAATTGTGTTGCGTGGTACTGGTTACAAAAATAATAATGTGTTCTATGAAAATCAAGTTAATAGAATTA GGGATTATTAATCATTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MSKIAKKIGIGILVIICILLIIILISFINHKVKLKKESKLFEPLGKMVKVNGHSMHVYTEGKGEVTLVFMSGGGTCSPTL DFKSLYSRLSGDYRIAVVEKAGYGFSEIIDMPRDIDTVLEETRKALKLAGEKAPYVLFPHSMSGIEALYWVEKYPDEVVG IVGLDPAVPKAYDNYPMPNKIVLNLSQFVAKIGLTRFIPSICNSSAAIQQGSLTEHEKEVYRAIFYRRTATKTMLNELKC IQESAKKINKMGIPEVPMLFFISNGNGTGWGKEQWQQSLKEYISKVSISQQVLFDCGHYIHDYEYERIALESKEFIKNIV LAK
Sequences:
>Translated_323_residues MSKIAKKIGIGILVIICILLIIILISFINHKVKLKKESKLFEPLGKMVKVNGHSMHVYTEGKGEVTLVFMSGGGTCSPTL DFKSLYSRLSGDYRIAVVEKAGYGFSEIIDMPRDIDTVLEETRKALKLAGEKAPYVLFPHSMSGIEALYWVEKYPDEVVG IVGLDPAVPKAYDNYPMPNKIVLNLSQFVAKIGLTRFIPSICNSSAAIQQGSLTEHEKEVYRAIFYRRTATKTMLNELKC IQESAKKINKMGIPEVPMLFFISNGNGTGWGKEQWQQSLKEYISKVSISQQVLFDCGHYIHDYEYERIALESKEFIKNIV LAK >Mature_322_residues SKIAKKIGIGILVIICILLIIILISFINHKVKLKKESKLFEPLGKMVKVNGHSMHVYTEGKGEVTLVFMSGGGTCSPTLD FKSLYSRLSGDYRIAVVEKAGYGFSEIIDMPRDIDTVLEETRKALKLAGEKAPYVLFPHSMSGIEALYWVEKYPDEVVGI VGLDPAVPKAYDNYPMPNKIVLNLSQFVAKIGLTRFIPSICNSSAAIQQGSLTEHEKEVYRAIFYRRTATKTMLNELKCI QESAKKINKMGIPEVPMLFFISNGNGTGWGKEQWQQSLKEYISKVSISQQVLFDCGHYIHDYEYERIALESKEFIKNIVL AK
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36330; Mature: 36199
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIAKKIGIGILVIICILLIIILISFINHKVKLKKESKLFEPLGKMVKVNGHSMHVYTE CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHEEECCCEEEEEEC GKGEVTLVFMSGGGTCSPTLDFKSLYSRLSGDYRIAVVEKAGYGFSEIIDMPRDIDTVLE CCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCHHHHHCCCCHHHHHHH ETRKALKLAGEKAPYVLFPHSMSGIEALYWVEKYPDEVVGIVGLDPAVPKAYDNYPMPNK HHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHH IVLNLSQFVAKIGLTRFIPSICNSSAAIQQGSLTEHEKEVYRAIFYRRTATKTMLNELKC HHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IQESAKKINKMGIPEVPMLFFISNGNGTGWGKEQWQQSLKEYISKVSISQQVLFDCGHYI HHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HDYEYERIALESKEFIKNIVLAK HCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SKIAKKIGIGILVIICILLIIILISFINHKVKLKKESKLFEPLGKMVKVNGHSMHVYTE CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHEEECCCEEEEEEC GKGEVTLVFMSGGGTCSPTLDFKSLYSRLSGDYRIAVVEKAGYGFSEIIDMPRDIDTVLE CCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCHHHHHCCCCHHHHHHH ETRKALKLAGEKAPYVLFPHSMSGIEALYWVEKYPDEVVGIVGLDPAVPKAYDNYPMPNK HHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHH IVLNLSQFVAKIGLTRFIPSICNSSAAIQQGSLTEHEKEVYRAIFYRRTATKTMLNELKC HHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IQESAKKINKMGIPEVPMLFFISNGNGTGWGKEQWQQSLKEYISKVSISQQVLFDCGHYI HHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HDYEYERIALESKEFIKNIVLAK HCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]