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The map label for this gene is hemAT [H]

Identifier: 153934771

GI number: 153934771

Start: 801945

End: 803411

Strand: Direct

Name: hemAT [H]

Synonym: CLC_0774

Alternate gene names: 153934771

Gene position: 801945-803411 (Clockwise)

Preceding gene: 153936162

Following gene: 153937395

Centisome position: 21.33

GC content: 28.29

Gene sequence:

>1467_bases
ATGGATTACAAAAAAAATGCGGAATTGAAAAATAAAATTATGTTGGCAGGATTTATAGCATCTGTAGTATTAAGGGCAAT
TTTTGATATAATTTTAAAGGTAGATAGGAATGCCATATTAATATTAGTTGGACTTTCTATACCTTTAGCTATAATCGATT
TTATATTAATAAAAAAGAAATGCATTATTCAAACAATGTATTATACGGTAATTATGTATACTGCTGTTATATGTATAATG
TTTATATCAGACCCAAATTGGGCTAATTTTATTTTGATATATTATGGGGTTATATTAATGAGTGTATATCAAGATTTAAA
AATATTAATTATTGAAGCAATTTTGGCTATAATACTTGTAGTGTATTTCTTCTTAGGACATAAAACAACCCTCTTTGCTT
CCGTAGAATACTATGAATTAGTATTTTATATAGCATACATAGTAGCAGGAACGGCTATATTGTCGATTAATGCCATTACT
ACCAAAAGTATTTATAAAGATTTAGAAGAAACTCATAAAGCTACTGAAGAAGCTAAATCTAGAGCAGAGTTATTGCTGGG
AAAAATATATAGTACTATAAAAGTTTTAACAGCAACTAATGAGAAAATAAAAAGTGGAATTTCTGTAGCAGGACAAATAG
CAGAAGAAATTACTAGTTCTACAAGCGACGTTGCTAATAGTGCAACCAAAGAAGTTGATGTAATGATTGGAATGAAAGCC
TCAATAGAGGGCGGAGCAGAAAAGGTAGAAGAAGTTACTAATTGCATTAAAACTATGGAGGAATTATCTAAGTCGACTGA
AAATGTTGTATTAGAAGGTAACAATAAAGTAGATATATTATATTCGGAAATGAATAAGGTAAATAAAAATATTTTAAGTG
TGGTATCCATGATAAATGAATTAAGTGACGAAAATGCAAAAATAGTTCATATTATTAACAGTATTACAAAAATATCAGAG
CAAACCAATCTATTAGCCCTTAATGCATCAATAGAAGCAGCTAGAGCTGGAGAGTATGGAAAAAGCTTTGCTGTAGTTGC
AGAAGAAGTAAGAAAACTTGCTGAGGATTCGAAAGAATCTACAGATCAAATAGAATTAATATTGAATAATATATCTAGTA
AAACAAAGGTAGTTGCAGAAGAAATATTAAAAGAAGAAAAGTCAATCGAATTATGTAATGAGCATACAAATGATGTTAAA
GAGTTATTTAAAGATGTTAATAAGAATACTTCTAATGTATTAAGTTATTCAAGCAGTGTTGGATCACAATCTATATTGCT
TGAAAGTACGATGAAAAATACATTAAGTTCAGTAAATAATATTAGCGAAACTGTAGAATCCACTGCAACTGCTATGGAAG
AAATTTTTACGGCTATTGATGAGCTTAATAATAGCATAATTGGTATAACAAGTAGTTATGATGAAATAGATGATATATGT
AATGAATTAAACTCTATAAGTGAATAA

Upstream 100 bases:

>100_bases
AATGATTAAAAAAGATGAAATATAAATAAATATATTAATAATAAAGTTATATGGCGATGCTACGAATAATAATATAGAAT
TCAATAAGAGGTGAGTAGTA

Downstream 100 bases:

>100_bases
AGTAGATAATATAAACAGAGTTCTTGGCTTCAGAGGGAGTTTTTACTCCCACTGAAGCTTAGAAATCGTTATCCAGGGAC
GTAACCACTCTTTACTCCCA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MDYKKNAELKNKIMLAGFIASVVLRAIFDIILKVDRNAILILVGLSIPLAIIDFILIKKKCIIQTMYYTVIMYTAVICIM
FISDPNWANFILIYYGVILMSVYQDLKILIIEAILAIILVVYFFLGHKTTLFASVEYYELVFYIAYIVAGTAILSINAIT
TKSIYKDLEETHKATEEAKSRAELLLGKIYSTIKVLTATNEKIKSGISVAGQIAEEITSSTSDVANSATKEVDVMIGMKA
SIEGGAEKVEEVTNCIKTMEELSKSTENVVLEGNNKVDILYSEMNKVNKNILSVVSMINELSDENAKIVHIINSITKISE
QTNLLALNASIEAARAGEYGKSFAVVAEEVRKLAEDSKESTDQIELILNNISSKTKVVAEEILKEEKSIELCNEHTNDVK
ELFKDVNKNTSNVLSYSSSVGSQSILLESTMKNTLSSVNNISETVESTATAMEEIFTAIDELNNSIIGITSSYDEIDDIC
NELNSISE

Sequences:

>Translated_488_residues
MDYKKNAELKNKIMLAGFIASVVLRAIFDIILKVDRNAILILVGLSIPLAIIDFILIKKKCIIQTMYYTVIMYTAVICIM
FISDPNWANFILIYYGVILMSVYQDLKILIIEAILAIILVVYFFLGHKTTLFASVEYYELVFYIAYIVAGTAILSINAIT
TKSIYKDLEETHKATEEAKSRAELLLGKIYSTIKVLTATNEKIKSGISVAGQIAEEITSSTSDVANSATKEVDVMIGMKA
SIEGGAEKVEEVTNCIKTMEELSKSTENVVLEGNNKVDILYSEMNKVNKNILSVVSMINELSDENAKIVHIINSITKISE
QTNLLALNASIEAARAGEYGKSFAVVAEEVRKLAEDSKESTDQIELILNNISSKTKVVAEEILKEEKSIELCNEHTNDVK
ELFKDVNKNTSNVLSYSSSVGSQSILLESTMKNTLSSVNNISETVESTATAMEEIFTAIDELNNSIIGITSSYDEIDDIC
NELNSISE
>Mature_488_residues
MDYKKNAELKNKIMLAGFIASVVLRAIFDIILKVDRNAILILVGLSIPLAIIDFILIKKKCIIQTMYYTVIMYTAVICIM
FISDPNWANFILIYYGVILMSVYQDLKILIIEAILAIILVVYFFLGHKTTLFASVEYYELVFYIAYIVAGTAILSINAIT
TKSIYKDLEETHKATEEAKSRAELLLGKIYSTIKVLTATNEKIKSGISVAGQIAEEITSSTSDVANSATKEVDVMIGMKA
SIEGGAEKVEEVTNCIKTMEELSKSTENVVLEGNNKVDILYSEMNKVNKNILSVVSMINELSDENAKIVHIINSITKISE
QTNLLALNASIEAARAGEYGKSFAVVAEEVRKLAEDSKESTDQIELILNNISSKTKVVAEEILKEEKSIELCNEHTNDVK
ELFKDVNKNTSNVLSYSSSVGSQSILLESTMKNTLSSVNNISETVESTATAMEEIFTAIDELNNSIIGITSSYDEIDDIC
NELNSISE

Specific function: Heme-containing signal transducer responsible for aerotaxis, the migratory response toward or away from oxygen [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=264, Percent_Identity=28.030303030303, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI1788195, Length=181, Percent_Identity=30.3867403314917, Blast_Score=82, Evalue=9e-17,
Organism=Escherichia coli, GI1789453, Length=167, Percent_Identity=28.7425149700599, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1787690, Length=283, Percent_Identity=26.8551236749117, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1788194, Length=167, Percent_Identity=30.5389221556886, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR012292
- InterPro:   IPR009050 [H]

Pfam domain/function: PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 53928; Mature: 53928

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYKKNAELKNKIMLAGFIASVVLRAIFDIILKVDRNAILILVGLSIPLAIIDFILIKKK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHH
CIIQTMYYTVIMYTAVICIMFISDPNWANFILIYYGVILMSVYQDLKILIIEAILAIILV
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYFFLGHKTTLFASVEYYELVFYIAYIVAGTAILSINAITTKSIYKDLEETHKATEEAKS
HHHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHH
RAELLLGKIYSTIKVLTATNEKIKSGISVAGQIAEEITSSTSDVANSATKEVDVMIGMKA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEECCC
SIEGGAEKVEEVTNCIKTMEELSKSTENVVLEGNNKVDILYSEMNKVNKNILSVVSMINE
CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHH
LSDENAKIVHIINSITKISEQTNLLALNASIEAARAGEYGKSFAVVAEEVRKLAEDSKES
HCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC
TDQIELILNNISSKTKVVAEEILKEEKSIELCNEHTNDVKELFKDVNKNTSNVLSYSSSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCC
GSQSILLESTMKNTLSSVNNISETVESTATAMEEIFTAIDELNNSIIGITSSYDEIDDIC
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHH
NELNSISE
HHHHCCCC
>Mature Secondary Structure
MDYKKNAELKNKIMLAGFIASVVLRAIFDIILKVDRNAILILVGLSIPLAIIDFILIKKK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHH
CIIQTMYYTVIMYTAVICIMFISDPNWANFILIYYGVILMSVYQDLKILIIEAILAIILV
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYFFLGHKTTLFASVEYYELVFYIAYIVAGTAILSINAITTKSIYKDLEETHKATEEAKS
HHHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHH
RAELLLGKIYSTIKVLTATNEKIKSGISVAGQIAEEITSSTSDVANSATKEVDVMIGMKA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEECCC
SIEGGAEKVEEVTNCIKTMEELSKSTENVVLEGNNKVDILYSEMNKVNKNILSVVSMINE
CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHH
LSDENAKIVHIINSITKISEQTNLLALNASIEAARAGEYGKSFAVVAEEVRKLAEDSKES
HCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC
TDQIELILNNISSKTKVVAEEILKEEKSIELCNEHTNDVKELFKDVNKNTSNVLSYSSSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCC
GSQSILLESTMKNTLSSVNNISETVESTATAMEEIFTAIDELNNSIIGITSSYDEIDDIC
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHH
NELNSISE
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8643458; 11016950; 10676961 [H]