| Definition | Clostridium botulinum A str. Hall, complete genome. |
|---|---|
| Accession | NC_009698 |
| Length | 3,760,560 |
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The map label for this gene is 153934734
Identifier: 153934734
GI number: 153934734
Start: 2351246
End: 2351842
Strand: Reverse
Name: 153934734
Synonym: CLC_2222
Alternate gene names: NA
Gene position: 2351842-2351246 (Counterclockwise)
Preceding gene: 153936144
Following gene: 153937601
Centisome position: 62.54
GC content: 28.64
Gene sequence:
>597_bases ATGTCGAAAAAAGCAAAAAAGCCATTCTATAAAAAATTTTGGATTTGGATTATTGCCATAATAATTATAGGTGGAGTAAT TGGTTCTAATGGTAGTAAAAAAACAGGGAATACATCTAATAATAGTTCAACTAAAAAAGAAGCTAAAAAAGAGGATACTA GAAAAATTACATATGAAAAATTTTCTAAAGTAAAAATGGGTTCAACTTATGAAGATGTAAAAAATATGTTAGGAGAAGCT AAAGAATCAACATCATCTGAAATGGGTGGTATAAAAACAGTTATATATACTTGGGATAATGGTGATGGAAGTAATATGAA TGTTACTTTTCAAAACAATAAAGCCTTAGCTAAAGCCCAAGCTGGTCTTTCAAGAAAAAGAGCTGATGTAAATATGGAAA AATATAATAAGATTCAAACAGGAATGGATTATAATAAAGTTAAAGAAATATTAGGAGACGGAGAATTAATGTCTATATCT GAAGTTGGCGGAAGCAATACATCAATATATTCATGGGTTAATTCTAATGGAACTAACATAAATGTAACATTTCAAGATGG AAAATCAGCAGCAAAGGCTCAATTCGGATTGAAATAA
Upstream 100 bases:
>100_bases AATATAATTATATTTTAAAATTAATAAATTATGGCATAAAAAAGATAATTTTTGTATAATAATGTCGAAATTATTTTAAA TAAAGAAAGAAGGAGATTAC
Downstream 100 bases:
>100_bases GTATGATTAAAGGGATACTTAAGTTTTTAAGTGTCTCTTTTTTATATATTTAAAAATTATAGGCTTTTAATCTTTTAAAT ATTTTCTGAAAATTTTTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MSKKAKKPFYKKFWIWIIAIIIIGGVIGSNGSKKTGNTSNNSSTKKEAKKEDTRKITYEKFSKVKMGSTYEDVKNMLGEA KESTSSEMGGIKTVIYTWDNGDGSNMNVTFQNNKALAKAQAGLSRKRADVNMEKYNKIQTGMDYNKVKEILGDGELMSIS EVGGSNTSIYSWVNSNGTNINVTFQDGKSAAKAQFGLK
Sequences:
>Translated_198_residues MSKKAKKPFYKKFWIWIIAIIIIGGVIGSNGSKKTGNTSNNSSTKKEAKKEDTRKITYEKFSKVKMGSTYEDVKNMLGEA KESTSSEMGGIKTVIYTWDNGDGSNMNVTFQNNKALAKAQAGLSRKRADVNMEKYNKIQTGMDYNKVKEILGDGELMSIS EVGGSNTSIYSWVNSNGTNINVTFQDGKSAAKAQFGLK >Mature_197_residues SKKAKKPFYKKFWIWIIAIIIIGGVIGSNGSKKTGNTSNNSSTKKEAKKEDTRKITYEKFSKVKMGSTYEDVKNMLGEAK ESTSSEMGGIKTVIYTWDNGDGSNMNVTFQNNKALAKAQAGLSRKRADVNMEKYNKIQTGMDYNKVKEILGDGELMSISE VGGSNTSIYSWVNSNGTNINVTFQDGKSAAKAQFGLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21788; Mature: 21657
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKAKKPFYKKFWIWIIAIIIIGGVIGSNGSKKTGNTSNNSSTKKEAKKEDTRKITYEK CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH FSKVKMGSTYEDVKNMLGEAKESTSSEMGGIKTVIYTWDNGDGSNMNVTFQNNKALAKAQ HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEEEECCCCHHHHHH AGLSRKRADVNMEKYNKIQTGMDYNKVKEILGDGELMSISEVGGSNTSIYSWVNSNGTNI HHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCEEEHHHCCCCCCEEEEEECCCCCEE NVTFQDGKSAAKAQFGLK EEEECCCCCHHHHHCCCC >Mature Secondary Structure SKKAKKPFYKKFWIWIIAIIIIGGVIGSNGSKKTGNTSNNSSTKKEAKKEDTRKITYEK CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH FSKVKMGSTYEDVKNMLGEAKESTSSEMGGIKTVIYTWDNGDGSNMNVTFQNNKALAKAQ HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEEEECCCCHHHHHH AGLSRKRADVNMEKYNKIQTGMDYNKVKEILGDGELMSISEVGGSNTSIYSWVNSNGTNI HHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCEEEHHHCCCCCCEEEEEECCCCCEE NVTFQDGKSAAKAQFGLK EEEECCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA