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The map label for this gene is 153934541

Identifier: 153934541

GI number: 153934541

Start: 326420

End: 326974

Strand: Direct

Name: 153934541

Synonym: CLC_0342

Alternate gene names: NA

Gene position: 326420-326974 (Clockwise)

Preceding gene: 153937821

Following gene: 153936117

Centisome position: 8.68

GC content: 26.13

Gene sequence:

>555_bases
ATGGATGATAAGAATGTAATGTCCTACAGCAAAGAAGAGCTAATACGAAAAATATTAGAAAAAGATAAGGATTTAAAAGG
CAGTGATATTGATGAAGAATTATTTCATGAACTTATTAGTGGTAAGATTTCAAAGAATATAAATAATACACATGACAACA
ACTTAACATTAGGACAAAGAACTGCTGATAAAATAGCTACATTCGGTGGAAGTTGGACATTTATAATTACTTTTTGTGTA
GTATTATCAATTTGGATTATAGGTAATGCTGTTATTCTAATTAATAAAGCATTTGATCCATATCCTTTTGTATTTTTGAA
TTTAATATTATCCTGTCTTGCTGCTATACAAGCGCCAATAATAATGATGTCACAAAATCGTCAATCCGAAAGAGATAGAT
TAACCGCTGCAAATGACTACCTTGTTAATTTAAAATCAGAAATTATAATAGAAGATTTGTACAATAAAATTGATATGTTA
ATAGATGAACAGGAAGAGTATAAAAAAAATCAAGAAATATTATTAAAAAAAATAGAAGAATTAAAATCTAATTAA

Upstream 100 bases:

>100_bases
TAAAGAAATGCTTGTTGTAAGGGAAGAAAGAATTTTAGAATATACAGAAGATTAATGTGAAATATTAAAAAACTAAATAG
TGAACAGGGGGAGATTATTT

Downstream 100 bases:

>100_bases
TTTATAATTACCTTATTCTAAATGATTTTGAAAAGGTTTAAAGATCTTATAGATAGATGTAGAAAAAAATAAAGCCTCTA
ATGAAAAATGAAAGTAGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MDDKNVMSYSKEELIRKILEKDKDLKGSDIDEELFHELISGKISKNINNTHDNNLTLGQRTADKIATFGGSWTFIITFCV
VLSIWIIGNAVILINKAFDPYPFVFLNLILSCLAAIQAPIIMMSQNRQSERDRLTAANDYLVNLKSEIIIEDLYNKIDML
IDEQEEYKKNQEILLKKIEELKSN

Sequences:

>Translated_184_residues
MDDKNVMSYSKEELIRKILEKDKDLKGSDIDEELFHELISGKISKNINNTHDNNLTLGQRTADKIATFGGSWTFIITFCV
VLSIWIIGNAVILINKAFDPYPFVFLNLILSCLAAIQAPIIMMSQNRQSERDRLTAANDYLVNLKSEIIIEDLYNKIDML
IDEQEEYKKNQEILLKKIEELKSN
>Mature_184_residues
MDDKNVMSYSKEELIRKILEKDKDLKGSDIDEELFHELISGKISKNINNTHDNNLTLGQRTADKIATFGGSWTFIITFCV
VLSIWIIGNAVILINKAFDPYPFVFLNLILSCLAAIQAPIIMMSQNRQSERDRLTAANDYLVNLKSEIIIEDLYNKIDML
IDEQEEYKKNQEILLKKIEELKSN

Specific function: Unknown

COG id: COG4420

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21188; Mature: 21188

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDKNVMSYSKEELIRKILEKDKDLKGSDIDEELFHELISGKISKNINNTHDNNLTLGQR
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
TADKIATFGGSWTFIITFCVVLSIWIIGNAVILINKAFDPYPFVFLNLILSCLAAIQAPI
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHCH
IMMSQNRQSERDRLTAANDYLVNLKSEIIIEDLYNKIDMLIDEQEEYKKNQEILLKKIEE
HEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LKSN
HHCC
>Mature Secondary Structure
MDDKNVMSYSKEELIRKILEKDKDLKGSDIDEELFHELISGKISKNINNTHDNNLTLGQR
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
TADKIATFGGSWTFIITFCVVLSIWIIGNAVILINKAFDPYPFVFLNLILSCLAAIQAPI
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHCH
IMMSQNRQSERDRLTAANDYLVNLKSEIIIEDLYNKIDMLIDEQEEYKKNQEILLKKIEE
HEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LKSN
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA