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The map label for this gene is 153934495

Identifier: 153934495

GI number: 153934495

Start: 2373791

End: 2374657

Strand: Reverse

Name: 153934495

Synonym: CLC_2248

Alternate gene names: NA

Gene position: 2374657-2373791 (Counterclockwise)

Preceding gene: 153934717

Following gene: 153937374

Centisome position: 63.15

GC content: 26.18

Gene sequence:

>867_bases
ATGGATATAAAAGGAATTATAGCATTAATGAGACCAAAACAATGGATAAAGAATTTTTTTGTCTTTGCAGCAATAATATT
TTCAGGTAATCTAACAAATGAAATCATATTAAAAAATAATATAATAACATTTATATTATTTTGTTTAACTTCGTCTACAA
TATATATACTTAATGATATAGTAGATCTAGAAAAGGATAAAAAACATCCTGAAAAGAAAAACAGACCTCTCCCAAGTGGA
AGGGTATCTAAATCTACAGCTATAATTATGAATATAGTAATACTTTTCACAGTATTATTTTGTTCCTATAAATTTGTAGA
TTATAAGATTATGTATATATATTTATTATATATTGTAATGAACATATTTTATTGTTTTAAGTTAAAAAATGTAGTTATAT
TAGATGTAATGGTGATAACCTTTGGATTTGTACTAAGAATGGAAAGCGGCAGTTTAGCTACCAAGGTTTCTGTATCACCT
TGGTTGTTTTTATGTACCATACTTTTATCCCTATTCTTAGCTTTAAACAAAAGAAAGAGTGAAATAATAACTTTAAAAGA
TAGCAGGGGGAGCCATAGAAAGATATTAGAAGAATATTCTGTAGAACTTATAGATAATATGCTAACTATAGTAACTCCAT
CTATATTAATATCCTATTGTATATATACTTTTAGTTCAGTACAAAGTAAGAGGATGATGTATACCATACCTTTTGTACTA
TACGGAATATTTAGATATCAATATTTAATGAACAACCATAATCTAGGGGGAAAGCCAGAGGATGTTTTTGGAAAGGATAA
ACCTTTTTTGGTGAATATGGTATTGTGGGTAATATCAGTAGTGGTTATAATATATTTTAAACTTTAA

Upstream 100 bases:

>100_bases
AGTGTGATAAATTATATGTTAGTTATATTTTTATACTATAAATATGTTTTATTTATTAAATAAAACCTAAAAATATATAT
AGTATTATTAGGAGGGAAAA

Downstream 100 bases:

>100_bases
GGATGGTGTATAAATGTAATGGAATTTAATTATTTAAGTGGTTATGAAAATAAAGACAGTAATTATAGTAAAACAAATTA
TTATAAAATAATAATAGGTT

Product: phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MDIKGIIALMRPKQWIKNFFVFAAIIFSGNLTNEIILKNNIITFILFCLTSSTIYILNDIVDLEKDKKHPEKKNRPLPSG
RVSKSTAIIMNIVILFTVLFCSYKFVDYKIMYIYLLYIVMNIFYCFKLKNVVILDVMVITFGFVLRMESGSLATKVSVSP
WLFLCTILLSLFLALNKRKSEIITLKDSRGSHRKILEEYSVELIDNMLTIVTPSILISYCIYTFSSVQSKRMMYTIPFVL
YGIFRYQYLMNNHNLGGKPEDVFGKDKPFLVNMVLWVISVVVIIYFKL

Sequences:

>Translated_288_residues
MDIKGIIALMRPKQWIKNFFVFAAIIFSGNLTNEIILKNNIITFILFCLTSSTIYILNDIVDLEKDKKHPEKKNRPLPSG
RVSKSTAIIMNIVILFTVLFCSYKFVDYKIMYIYLLYIVMNIFYCFKLKNVVILDVMVITFGFVLRMESGSLATKVSVSP
WLFLCTILLSLFLALNKRKSEIITLKDSRGSHRKILEEYSVELIDNMLTIVTPSILISYCIYTFSSVQSKRMMYTIPFVL
YGIFRYQYLMNNHNLGGKPEDVFGKDKPFLVNMVLWVISVVVIIYFKL
>Mature_288_residues
MDIKGIIALMRPKQWIKNFFVFAAIIFSGNLTNEIILKNNIITFILFCLTSSTIYILNDIVDLEKDKKHPEKKNRPLPSG
RVSKSTAIIMNIVILFTVLFCSYKFVDYKIMYIYLLYIVMNIFYCFKLKNVVILDVMVITFGFVLRMESGSLATKVSVSP
WLFLCTILLSLFLALNKRKSEIITLKDSRGSHRKILEEYSVELIDNMLTIVTPSILISYCIYTFSSVQSKRMMYTIPFVL
YGIFRYQYLMNNHNLGGKPEDVFGKDKPFLVNMVLWVISVVVIIYFKL

Specific function: Possible permease/transporter [H]

COG id: COG0382

COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR000537 [H]

Pfam domain/function: PF01040 UbiA [H]

EC number: NA

Molecular weight: Translated: 33450; Mature: 33450

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKGIIALMRPKQWIKNFFVFAAIIFSGNLTNEIILKNNIITFILFCLTSSTIYILNDI
CCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHCCHHHHHHHH
VDLEKDKKHPEKKNRPLPSGRVSKSTAIIMNIVILFTVLFCSYKFVDYKIMYIYLLYIVM
HHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NIFYCFKLKNVVILDVMVITFGFVLRMESGSLATKVSVSPWLFLCTILLSLFLALNKRKS
HHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCC
EIITLKDSRGSHRKILEEYSVELIDNMLTIVTPSILISYCIYTFSSVQSKRMMYTIPFVL
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
YGIFRYQYLMNNHNLGGKPEDVFGKDKPFLVNMVLWVISVVVIIYFKL
HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDIKGIIALMRPKQWIKNFFVFAAIIFSGNLTNEIILKNNIITFILFCLTSSTIYILNDI
CCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHCCHHHHHHHH
VDLEKDKKHPEKKNRPLPSGRVSKSTAIIMNIVILFTVLFCSYKFVDYKIMYIYLLYIVM
HHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NIFYCFKLKNVVILDVMVITFGFVLRMESGSLATKVSVSPWLFLCTILLSLFLALNKRKS
HHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCC
EIITLKDSRGSHRKILEEYSVELIDNMLTIVTPSILISYCIYTFSSVQSKRMMYTIPFVL
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
YGIFRYQYLMNNHNLGGKPEDVFGKDKPFLVNMVLWVISVVVIIYFKL
HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]