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The map label for this gene is selD [H]

Identifier: 153934289

GI number: 153934289

Start: 3144455

End: 3145543

Strand: Reverse

Name: selD [H]

Synonym: CLB_3002

Alternate gene names: 153934289

Gene position: 3145543-3144455 (Counterclockwise)

Preceding gene: 153930808

Following gene: 153931290

Centisome position: 81.42

GC content: 31.59

Gene sequence:

>1089_bases
GTGCTTAAAATGTCAAATAATATAAATATTAAAGAAGGAGAAGCCTGTTCTATAGAGAAAAAAGAAGTAAGACTTACAGA
GCTTTCAAGAACATCAGGATGAGCGGCTAAGATAGCACCGGGAGTGCTCTCAAAAATACTTTCAAAATTACCTAAAATGG
AAAGTGAAAATTTAATAGTAGGAATAGAAACTGCAGATGATGCAGCAGTATATAAAATAAATGATGATACAGCTATGATA
CAGACATTAGATTTTTTTACACCTATAGTAGATGATCCATATATGTTCGGCCAAATAGCTGCAGCTAACTCTTTAAGCGA
TGTATATGCTATGGGAGGTAAGCCAGTAGTAGCATTGAATATAGTTTGTTTTCCTTCATGTTTGCCTATAGAAGTTTTAG
GCGAGATATTAAAAGGTGGAGCAGATAAGGTTATGGAATCAGGGGCTGTAGTAATAGGAGGACATACTGTTGATGATAAC
GAGCCTAAATATGGTTTGTCAGTAACAGGTATTGTACATCCAGATAAAGTTTTAAAAAATTATGGATGTAAAGAGGGCGA
AGTTTTAATTACTACAAAACCTTTAGGGATAGGTATTATAAACACTGCTATAAAAGGAGATATGGCATCTAAAGAAGCAA
AAGATGCAGCAGTAAAATCTATGAGTACTTTAAATAAATATGCAGGGGAAATAATAACTAAATATAATATAAGTGCTTGT
ACGGATATTACTGGATTTGGTTTTCTAGGACATGCGTATGAGATGGCTAGTGCATCAAATGTTACTTTAAAATTTAACTA
TAAGAGAATATCTTATATAAAAGAAGCAGAGGAATATGCTGAATTTGGATTAGTTCCAGCAGGAGCTTACGCTAATAGAG
ATCATATCGAAGGAAATTTTGAGTTTAAAAATGTTCCTGTATTTATGCAAGATATATTATTTGATCCTCAAACTTCAGGT
GGATTATTAATTTCTTGTTCAAAAGAAGAGTCAGAAAAAATTATGAAAGAATTAAATAAATTGGAGTTAAAATCTTCTAT
TGTAGGAGAAGTTATAAGGAAACAAGATAAATATATAATAGTTGAATAA

Upstream 100 bases:

>100_bases
GTAGTATTCTTTATATTTCTTTTAAATTTTTACAAAATAATATATAATGAGTATTGAATAATTTATTATTTTTAATGTAG
TTTGGTTTTTATAAAGAGAG

Downstream 100 bases:

>100_bases
AATATTATACTATTTATGACAATAAGTATTGAATATACAACATAATTAAGGAATGGAGAAAAGGGCATGGATAAAAAACA
ATTATTACGTAATTTACCTA

Product: selenide, water dikinase, selenocysteine-containing

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MLKMSNNINIKEGEACSIEKKEVRLTELSRTSGUAAKIAPGVLSKILSKLPKMESENLIVGIETADDAAVYKINDDTAMI
QTLDFFTPIVDDPYMFGQIAAANSLSDVYAMGGKPVVALNIVCFPSCLPIEVLGEILKGGADKVMESGAVVIGGHTVDDN
EPKYGLSVTGIVHPDKVLKNYGCKEGEVLITTKPLGIGIINTAIKGDMASKEAKDAAVKSMSTLNKYAGEIITKYNISAC
TDITGFGFLGHAYEMASASNVTLKFNYKRISYIKEAEEYAEFGLVPAGAYANRDHIEGNFEFKNVPVFMQDILFDPQTSG
GLLISCSKEESEKIMKELNKLELKSSIVGEVIRKQDKYIIVE

Sequences:

>Translated_362_residues
MLKMSNNINIKEGEACSIEKKEVRLTELSRTSG*AAKIAPGVLSKILSKLPKMESENLIVGIETADDAAVYKINDDTAMI
QTLDFFTPIVDDPYMFGQIAAANSLSDVYAMGGKPVVALNIVCFPSCLPIEVLGEILKGGADKVMESGAVVIGGHTVDDN
EPKYGLSVTGIVHPDKVLKNYGCKEGEVLITTKPLGIGIINTAIKGDMASKEAKDAAVKSMSTLNKYAGEIITKYNISAC
TDITGFGFLGHAYEMASASNVTLKFNYKRISYIKEAEEYAEFGLVPAGAYANRDHIEGNFEFKNVPVFMQDILFDPQTSG
GLLISCSKEESEKIMKELNKLELKSSIVGEVIRKQDKYIIVE
>Mature_362_residues
MLKMSNNINIKEGEACSIEKKEVRLTELSRTSG*AAKIAPGVLSKILSKLPKMESENLIVGIETADDAAVYKINDDTAMI
QTLDFFTPIVDDPYMFGQIAAANSLSDVYAMGGKPVVALNIVCFPSCLPIEVLGEILKGGADKVMESGAVVIGGHTVDDN
EPKYGLSVTGIVHPDKVLKNYGCKEGEVLITTKPLGIGIINTAIKGDMASKEAKDAAVKSMSTLNKYAGEIITKYNISAC
TDITGFGFLGHAYEMASASNVTLKFNYKRISYIKEAEEYAEFGLVPAGAYANRDHIEGNFEFKNVPVFMQDILFDPQTSG
GLLISCSKEESEKIMKELNKLELKSSIVGEVIRKQDKYIIVE

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797148, Length=352, Percent_Identity=27.8409090909091, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI15011844, Length=297, Percent_Identity=30.6397306397306, Blast_Score=105, Evalue=5e-23,
Organism=Escherichia coli, GI1788062, Length=350, Percent_Identity=38.2857142857143, Blast_Score=239, Evalue=3e-64,
Organism=Caenorhabditis elegans, GI17543426, Length=353, Percent_Identity=28.0453257790368, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24653602, Length=364, Percent_Identity=29.3956043956044, Blast_Score=125, Evalue=6e-29,
Organism=Drosophila melanogaster, GI24653604, Length=364, Percent_Identity=29.3956043956044, Blast_Score=125, Evalue=6e-29,
Organism=Drosophila melanogaster, GI28574119, Length=362, Percent_Identity=27.6243093922652, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI28574118, Length=265, Percent_Identity=31.3207547169811, Blast_Score=99, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 39119; Mature: 39119

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKMSNNINIKEGEACSIEKKEVRLTELSRTSGAAKIAPGVLSKILSKLPKMESENLIVG
CEEECCCCCCCCCCCCCCCHHHEEEHHHHCCCCCCHHCHHHHHHHHHHCCCCCCCCEEEE
IETADDAAVYKINDDTAMIQTLDFFTPIVDDPYMFGQIAAANSLSDVYAMGGKPVVALNI
EEECCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHCCCCCEEEEEE
VCFPSCLPIEVLGEILKGGADKVMESGAVVIGGHTVDDNEPKYGLSVTGIVHPDKVLKNY
EECCCCCCHHHHHHHHCCCHHHHHHCCCEEEECEEECCCCCCCCEEEEEEECHHHHHHHC
GCKEGEVLITTKPLGIGIINTAIKGDMASKEAKDAAVKSMSTLNKYAGEIITKYNISACT
CCCCCCEEEEECCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHC
DITGFGFLGHAYEMASASNVTLKFNYKRISYIKEAEEYAEFGLVPAGAYANRDHIEGNFE
CCCCCCHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
FKNVPVFMQDILFDPQTSGGLLISCSKEESEKIMKELNKLELKSSIVGEVIRKQDKYIIV
ECCCCHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
E
C
>Mature Secondary Structure
MLKMSNNINIKEGEACSIEKKEVRLTELSRTSGAAKIAPGVLSKILSKLPKMESENLIVG
CEEECCCCCCCCCCCCCCCHHHEEEHHHHCCCCCCHHCHHHHHHHHHHCCCCCCCCEEEE
IETADDAAVYKINDDTAMIQTLDFFTPIVDDPYMFGQIAAANSLSDVYAMGGKPVVALNI
EEECCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHCCCCCEEEEEE
VCFPSCLPIEVLGEILKGGADKVMESGAVVIGGHTVDDNEPKYGLSVTGIVHPDKVLKNY
EECCCCCCHHHHHHHHCCCHHHHHHCCCEEEECEEECCCCCCCCEEEEEEECHHHHHHHC
GCKEGEVLITTKPLGIGIINTAIKGDMASKEAKDAAVKSMSTLNKYAGEIITKYNISACT
CCCCCCEEEEECCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHC
DITGFGFLGHAYEMASASNVTLKFNYKRISYIKEAEEYAEFGLVPAGAYANRDHIEGNFE
CCCCCCHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
FKNVPVFMQDILFDPQTSGGLLISCSKEESEKIMKELNKLELKSSIVGEVIRKQDKYIIV
ECCCCHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA