| Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
|---|---|
| Accession | NC_009697 |
| Length | 3,863,450 |
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The map label for this gene is 153934260
Identifier: 153934260
GI number: 153934260
Start: 2280478
End: 2281299
Strand: Reverse
Name: 153934260
Synonym: CLB_2138
Alternate gene names: NA
Gene position: 2281299-2280478 (Counterclockwise)
Preceding gene: 153933135
Following gene: 153931821
Centisome position: 59.05
GC content: 27.49
Gene sequence:
>822_bases TTGATGAATAAAAAAATAAACACAATGTATTTTAGTGGTACGGATACAACTAAAAAAGTAGTATGTGCTATAGCAAAAAC ACTTTCAGAAAATTTTCAGATAAAAGAAAAGATAAATAATGTTGATTTTACATTACCAAAGGTAAGAGAAAAAGTAGTGT CTTTTTCAGAAGAGGATATTGTTATAGTGGGAGTTCCTGTTTACGCAGGAAGAGTTCCTAATGTACTTTTAAAGTATCTA AAAACTATTTCTAGTAATGGTGCATTGGCTATAGCAATAGTGCTTTATGGAAATAGAAATTATGATGATGCATTAATAGA ACTAAAAGACATATTAGAATTAGATGGTTTTAAAGTTGTTGCAGGGGCTGCATTTATAGGTGAACATTCTTTTTCAAATA ACCTTGCCAAAAATAGACCAGATGAAAAAGATATGGATATAGTTAGGACTTTTGCTGATGAAATATATATAAAGATTATA AATGAAAAAATAATAAAAACAGTATTTGTAAAGGGAAATACCCCTTATAGAAAATATTATATGCCAAAGGATGAAAAAGG CCAGCCTATTGATATAAGAAAAGTTAAACCAGAGACGAATAATAATTGTATAGATTGCAAACTTTGTGCAAATCTTTGCC CTATGGGATCTATTGATTTTGAAGATGTAACTAAACTAAATGGGATTTGTATTAAATGTTGTGCCTGTATTAAAAAATGT CCTGTAGAAGCAAAATATTTTGATGATAGTGGATATTTAAAACATAAAAAAGAACTAGAAAATAATTTTAGATATAGAAA AGAACCAGAATTATTTATTTAA
Upstream 100 bases:
>100_bases AAAATACATAAGGCTTTATCCAATTTCATATATAATTATACATATCTAATACTTTTTATAACATAAAATATTTTGATACA CCTATAGGAGGGAGAAAACC
Downstream 100 bases:
>100_bases TGTAATTTTAAATATACTTCCCACATATATATGAAAATGTAAGGAAGATAAATCTTAGCTATAACCTTAAAGCTTGAAAG ATCAGAGGTTATAGCTAGGG
Product: iron-sulfur cluster-binding protein
Products: NA
Alternate protein names: 4Fe-4S Ferredoxin; Flavodoxin; Flavodoxin/Nitric Oxide Synthase; Iron-Sulfur Proteins
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MMNKKINTMYFSGTDTTKKVVCAIAKTLSENFQIKEKINNVDFTLPKVREKVVSFSEEDIVIVGVPVYAGRVPNVLLKYL KTISSNGALAIAIVLYGNRNYDDALIELKDILELDGFKVVAGAAFIGEHSFSNNLAKNRPDEKDMDIVRTFADEIYIKII NEKIIKTVFVKGNTPYRKYYMPKDEKGQPIDIRKVKPETNNNCIDCKLCANLCPMGSIDFEDVTKLNGICIKCCACIKKC PVEAKYFDDSGYLKHKKELENNFRYRKEPELFI
Sequences:
>Translated_273_residues MMNKKINTMYFSGTDTTKKVVCAIAKTLSENFQIKEKINNVDFTLPKVREKVVSFSEEDIVIVGVPVYAGRVPNVLLKYL KTISSNGALAIAIVLYGNRNYDDALIELKDILELDGFKVVAGAAFIGEHSFSNNLAKNRPDEKDMDIVRTFADEIYIKII NEKIIKTVFVKGNTPYRKYYMPKDEKGQPIDIRKVKPETNNNCIDCKLCANLCPMGSIDFEDVTKLNGICIKCCACIKKC PVEAKYFDDSGYLKHKKELENNFRYRKEPELFI >Mature_273_residues MMNKKINTMYFSGTDTTKKVVCAIAKTLSENFQIKEKINNVDFTLPKVREKVVSFSEEDIVIVGVPVYAGRVPNVLLKYL KTISSNGALAIAIVLYGNRNYDDALIELKDILELDGFKVVAGAAFIGEHSFSNNLAKNRPDEKDMDIVRTFADEIYIKII NEKIIKTVFVKGNTPYRKYYMPKDEKGQPIDIRKVKPETNNNCIDCKLCANLCPMGSIDFEDVTKLNGICIKCCACIKKC PVEAKYFDDSGYLKHKKELENNFRYRKEPELFI
Specific function: Unknown
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31058; Mature: 31058
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: PS00198 4FE4S_FERREDOXIN ; PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNKKINTMYFSGTDTTKKVVCAIAKTLSENFQIKEKINNVDFTLPKVREKVVSFSEEDI CCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHCCCCCCE VIVGVPVYAGRVPNVLLKYLKTISSNGALAIAIVLYGNRNYDDALIELKDILELDGFKVV EEEECCHHCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCEEEE AGAAFIGEHSFSNNLAKNRPDEKDMDIVRTFADEIYIKIINEKIIKTVFVKGNTPYRKYY EHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEE MPKDEKGQPIDIRKVKPETNNNCIDCKLCANLCPMGSIDFEDVTKLNGICIKCCACIKKC CCCCCCCCCEEEEEECCCCCCCEEEHEEHHCCCCCCCCCHHHHHHHCHHHHHHHHHHHHC PVEAKYFDDSGYLKHKKELENNFRYRKEPELFI CCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MMNKKINTMYFSGTDTTKKVVCAIAKTLSENFQIKEKINNVDFTLPKVREKVVSFSEEDI CCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHCCCCCCE VIVGVPVYAGRVPNVLLKYLKTISSNGALAIAIVLYGNRNYDDALIELKDILELDGFKVV EEEECCHHCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCEEEE AGAAFIGEHSFSNNLAKNRPDEKDMDIVRTFADEIYIKIINEKIIKTVFVKGNTPYRKYY EHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEE MPKDEKGQPIDIRKVKPETNNNCIDCKLCANLCPMGSIDFEDVTKLNGICIKCCACIKKC CCCCCCCCCEEEEEECCCCCCCEEEHEEHHCCCCCCCCCHHHHHHHCHHHHHHHHHHHHC PVEAKYFDDSGYLKHKKELENNFRYRKEPELFI CCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA