| Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
|---|---|
| Accession | NC_009697 |
| Length | 3,863,450 |
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The map label for this gene is 153934029
Identifier: 153934029
GI number: 153934029
Start: 2286870
End: 2287469
Strand: Reverse
Name: 153934029
Synonym: CLB_2143
Alternate gene names: NA
Gene position: 2287469-2286870 (Counterclockwise)
Preceding gene: 153931251
Following gene: 153933714
Centisome position: 59.21
GC content: 30.33
Gene sequence:
>600_bases ATGAGAAAAGATTTTTATGAAGCAATAAAAGAAAGACGTACATTTTATGGAATTAGTAAAGAAGCATTAGTTTCAGATGA TAGAATTAAGGAAGTTATTGAGCATGCAGTAAAGCATACACCTTCTGCCTTTAACTCTCAAAGTGCAAGAGTAGTGCTAT TGTTAGGAGATAAGCATGATAAACTATGGAGTATTACAAAAGAAGCTTTAAGAAAGATAGTACCTGAAGATAAATTTGGA AGTACTGAAGAAAAAATAAACTCTTTTGCTAGTGGGTATGGAACAATTTTATATTTTGAAGATATGAGTGTAGTGGAAGA TCTTCAAAAACAATTTTCTTTATACAAAGACAATTTCCCAATATGGTCTCAACAATCTAGTGGAATGCTTCAATTTGTTA TATGGACATCATTAGAAATAGAAGGTTTTGGAGCTTCATTGCAACATTATAATGAACTTATTGAAGAAGATGTTAAAAAG GAATGGAATATACCAAACAACTGGAAACTTATAGCTCAAATGCCTTTTGGTAAACCAGTGGTAAAGCCAGATGAAAAACA ATATAAACCATTAGGAGAACGTATTAAAATAATTAAATAG
Upstream 100 bases:
>100_bases AAATAATGATTTTGGATATTATAATATAAAATATCATAGGAAATATAATTACCTTTTAATGGTTAAATCAAAATTATATA TAAAATTGGAGGAGTTAATA
Downstream 100 bases:
>100_bases TTAAAATAATAATATAATTAAGCTCTCACATTGTGGGAGCTTAATTATATTAGCATTTAAAATATTCTTATCTGTAAAAA ATAAGGATTAAAGCATTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Nitroreductase Family Protein; Oxidoreductase; Oxidoreductase Related Nitroreductase; Oxidoreductase Related Nitroreductase-Like Protein; Oxydoreductase Related Nitroreductase; Ypothetical Protein SMU.; Oxidoreductase/Nitroreductase
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MRKDFYEAIKERRTFYGISKEALVSDDRIKEVIEHAVKHTPSAFNSQSARVVLLLGDKHDKLWSITKEALRKIVPEDKFG STEEKINSFASGYGTILYFEDMSVVEDLQKQFSLYKDNFPIWSQQSSGMLQFVIWTSLEIEGFGASLQHYNELIEEDVKK EWNIPNNWKLIAQMPFGKPVVKPDEKQYKPLGERIKIIK
Sequences:
>Translated_199_residues MRKDFYEAIKERRTFYGISKEALVSDDRIKEVIEHAVKHTPSAFNSQSARVVLLLGDKHDKLWSITKEALRKIVPEDKFG STEEKINSFASGYGTILYFEDMSVVEDLQKQFSLYKDNFPIWSQQSSGMLQFVIWTSLEIEGFGASLQHYNELIEEDVKK EWNIPNNWKLIAQMPFGKPVVKPDEKQYKPLGERIKIIK >Mature_199_residues MRKDFYEAIKERRTFYGISKEALVSDDRIKEVIEHAVKHTPSAFNSQSARVVLLLGDKHDKLWSITKEALRKIVPEDKFG STEEKINSFASGYGTILYFEDMSVVEDLQKQFSLYKDNFPIWSQQSSGMLQFVIWTSLEIEGFGASLQHYNELIEEDVKK EWNIPNNWKLIAQMPFGKPVVKPDEKQYKPLGERIKIIK
Specific function: Unknown
COG id: COG3560
COG function: function code R; Predicted oxidoreductase related to nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6319823, Length=187, Percent_Identity=31.5508021390374, Blast_Score=116, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23166; Mature: 23166
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKDFYEAIKERRTFYGISKEALVSDDRIKEVIEHAVKHTPSAFNSQSARVVLLLGDKHD CCHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCH KLWSITKEALRKIVPEDKFGSTEEKINSFASGYGTILYFEDMSVVEDLQKQFSLYKDNFP HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCC IWSQQSSGMLQFVIWTSLEIEGFGASLQHYNELIEEDVKKEWNIPNNWKLIAQMPFGKPV CCCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC VKPDEKQYKPLGERIKIIK CCCCHHHHCCHHHHHEECC >Mature Secondary Structure MRKDFYEAIKERRTFYGISKEALVSDDRIKEVIEHAVKHTPSAFNSQSARVVLLLGDKHD CCHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCH KLWSITKEALRKIVPEDKFGSTEEKINSFASGYGTILYFEDMSVVEDLQKQFSLYKDNFP HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCC IWSQQSSGMLQFVIWTSLEIEGFGASLQHYNELIEEDVKKEWNIPNNWKLIAQMPFGKPV CCCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC VKPDEKQYKPLGERIKIIK CCCCHHHHCCHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA