| Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
|---|---|
| Accession | NC_009697 |
| Length | 3,863,450 |
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The map label for this gene is 153933202
Identifier: 153933202
GI number: 153933202
Start: 3640589
End: 3641251
Strand: Reverse
Name: 153933202
Synonym: CLB_3481
Alternate gene names: NA
Gene position: 3641251-3640589 (Counterclockwise)
Preceding gene: 153932770
Following gene: 153934022
Centisome position: 94.25
GC content: 30.47
Gene sequence:
>663_bases ATGAGTAGAATAAATATTTTCACAGGACATTTTGGTAGTGGGAAAACAGAAATTGCCATAAATTATGCTATAAAGTTAGC TAAAGAAGGCAAAAAAGTAGCCTTAGTAGACATAGATATTGTAAATCCATATTTCTGCTCAAGAAGTCTAAAGGAAGAGT TTGATAAATTGGGCATAAGAGTAATAGCTTCTGACTCTAAACTTATGAATGCAGAGCTAATGGTTGTGCCTGGTGAAGTT ATGGCAGTTTTCAATGACAAAAGTTATGAAGTTGTTATGGATATAGGTGGTGACGATCAAGGGGCAACAGTGCTTGGTCA ATATAACAAATATTTTAATGAAGAAGATTATGATATGTATTTTGTAGTTAATAATAATAGACCACTTACATCTAATGAAA AAGAAACAGAGGATTATATAAAATCTATAGAAATTTCATCTAGGTTAAAAGTTAAATATCTTATATCAAATACAAATCTT TCATATGAAACCACAGTAGATCATATATTAAAAGGTGATGAGATAGTTTTAGAACTTTCTAAAAAGACTGGTCTTCCTTA TAAATATATTGTGTGTAGAAAAGATTTTGTAGATGACATAGAGGGCAAGGTTCATGGAGAAATATTCCCAATAGATATAT ACATGAAACCGCCTTGGAGATAA
Upstream 100 bases:
>100_bases ATGAAAAATGAAAGAGCTATTTCATACAGTGTGAAAAATTTTTTACTACATGTGAAAAGGGTTTCATTTTATGAAAATGC TCTGTTTTGGAGTGATTAAA
Downstream 100 bases:
>100_bases TTTAAATTTAAAATTGTCAAAATCTTAAAATTTATTAATAAATAAAAACTGAATATAGACTTGTAAGGCATTCTTATTAA AAAACTTAAGGAGGGGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MSRINIFTGHFGSGKTEIAINYAIKLAKEGKKVALVDIDIVNPYFCSRSLKEEFDKLGIRVIASDSKLMNAELMVVPGEV MAVFNDKSYEVVMDIGGDDQGATVLGQYNKYFNEEDYDMYFVVNNNRPLTSNEKETEDYIKSIEISSRLKVKYLISNTNL SYETTVDHILKGDEIVLELSKKTGLPYKYIVCRKDFVDDIEGKVHGEIFPIDIYMKPPWR
Sequences:
>Translated_220_residues MSRINIFTGHFGSGKTEIAINYAIKLAKEGKKVALVDIDIVNPYFCSRSLKEEFDKLGIRVIASDSKLMNAELMVVPGEV MAVFNDKSYEVVMDIGGDDQGATVLGQYNKYFNEEDYDMYFVVNNNRPLTSNEKETEDYIKSIEISSRLKVKYLISNTNL SYETTVDHILKGDEIVLELSKKTGLPYKYIVCRKDFVDDIEGKVHGEIFPIDIYMKPPWR >Mature_219_residues SRINIFTGHFGSGKTEIAINYAIKLAKEGKKVALVDIDIVNPYFCSRSLKEEFDKLGIRVIASDSKLMNAELMVVPGEVM AVFNDKSYEVVMDIGGDDQGATVLGQYNKYFNEEDYDMYFVVNNNRPLTSNEKETEDYIKSIEISSRLKVKYLISNTNLS YETTVDHILKGDEIVLELSKKTGLPYKYIVCRKDFVDDIEGKVHGEIFPIDIYMKPPWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25125; Mature: 24994
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRINIFTGHFGSGKTEIAINYAIKLAKEGKKVALVDIDIVNPYFCSRSLKEEFDKLGIR CCEEEEEEECCCCCCEEEEEEEEEEEECCCCEEEEEEEEECCHHHHCHHHHHHHHHCCEE VIASDSKLMNAELMVVPGEVMAVFNDKSYEVVMDIGGDDQGATVLGQYNKYFNEEDYDMY EEECCCCEECEEEEEECCCEEEEECCCCEEEEEEECCCCCCCEEEECHHHHCCCCCCEEE FVVNNNRPLTSNEKETEDYIKSIEISSRLKVKYLISNTNLSYETTVDHILKGDEIVLELS EEECCCCCCCCCCHHHHHHHHHEECCCCEEEEEEEECCCCCEEHHHHHHHCCCEEEEEEE KKTGLPYKYIVCRKDFVDDIEGKVHGEIFPIDIYMKPPWR CCCCCCEEEEEEECHHHHHCCCEECCEEEEEEEEECCCCC >Mature Secondary Structure SRINIFTGHFGSGKTEIAINYAIKLAKEGKKVALVDIDIVNPYFCSRSLKEEFDKLGIR CEEEEEEECCCCCCEEEEEEEEEEEECCCCEEEEEEEEECCHHHHCHHHHHHHHHCCEE VIASDSKLMNAELMVVPGEVMAVFNDKSYEVVMDIGGDDQGATVLGQYNKYFNEEDYDMY EEECCCCEECEEEEEECCCEEEEECCCCEEEEEEECCCCCCCEEEECHHHHCCCCCCEEE FVVNNNRPLTSNEKETEDYIKSIEISSRLKVKYLISNTNLSYETTVDHILKGDEIVLELS EEECCCCCCCCCCHHHHHHHHHEECCCCEEEEEEEECCCCCEEHHHHHHHCCCEEEEEEE KKTGLPYKYIVCRKDFVDDIEGKVHGEIFPIDIYMKPPWR CCCCCCEEEEEEECHHHHHCCCEECCEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA