| Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
|---|---|
| Accession | NC_009697 |
| Length | 3,863,450 |
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The map label for this gene is 153932669
Identifier: 153932669
GI number: 153932669
Start: 3193629
End: 3194969
Strand: Reverse
Name: 153932669
Synonym: CLB_3054
Alternate gene names: NA
Gene position: 3194969-3193629 (Counterclockwise)
Preceding gene: 153931490
Following gene: 153932426
Centisome position: 82.7
GC content: 27.74
Gene sequence:
>1341_bases ATGGGATTACCTTCCTATGTAGTCAACTTTGATGAACTATCAGATCTTATTAAAGATTATTTACAAAATGGTGTGAAAGT TGACATAGGCAATATAAATTTTTCTACCAAAGATATGGAAAATTTATTATCAGAAATTAAAGATAAAATACAAGGTGTAG ATTATAATGATTTAATAAATGCGTTAAATGCTTTAGGTGTAAAGTTAGATAATTTAAGTGGAAATTTAGGTATATCAGGC ACACAGAAAATTTATGGGAAAATGCTAGAGATTCCTGCAGTAAAAGGACAGCATATAATAGAATTTAAGGGAAATGGACA AATAACAGGTATAACATATTCTCAATCTAGTTGGAGATTTGAAGATAGCTGGGATTTACAAGTAGGTAATGATAAATTAT TTGAAAGTGTACGCACTAAAGAATATGGTGAACATAAATTTTTAAATGTATTTTATCCTATAAATGGTACAGTCAAATTT ATTTACAATAATATTAGTGGAACTAGTAAAGTTTTATGGGTAGATTTTAATATATTAGAAAATAGTAATTTACCTACACC TACTATACCTACCACTAGTGAAAAAAACTATAGATTTTTAGCTATAGGAGAAAGTGAATATACTTTACAAGGCGCTAATA ACCTTATGGGTTGCACATATGATGCTGACAATATATCTAATTTATTTAAAGAGCATAAAGAAAGTGCTAAATTTACAAAA AATATAGTTGCAAAAAATAAAACTAAATCAGAAGCATTAAATTTAATAAAAAACACTTTTCAAGATGCACAAGATAATGA TATTAGTTATTTGTTTTGGTCTGGACATGGTACTGTATATGAAGATAAGTTTGCTTTAGTAGCAAAAGATAACATAATAA CAGTATATGAATTACAAACAATACTGGATGATATAAAAGGCACTAAGGTAATATTTATTGATACTTGCCACAGTGGACTT GCTATAGATAAAAATTTTGCATATACATTAGCTGTAGTGGAGGAGAAACTTAGAAGTATAGACAAAACATTAAATAAACA AGGATATAAGGTTTTAACAGCTAGTGCAGGGTCAGAAACATCCGGTGACTTGAGCGCTGGATATAATGGAAATCCTAATC CTTCAGGAGCTTTTACATGGGCATTAACACAAAGCATTAAAACTAAAAAATCTGATAAAGATAAAAATAGAATTGTAACT TTGGAAGAATTATATCAAAGTGTATTACATTTTTATGATGAATTTAATATTAAAAATCCTTATTTAAAGATAACACAAAC AGCTCAAGTTTATCCAAGAAATGATACAAGTTCAATCTTTGAATATAAAGAAGGTGCTTAA
Upstream 100 bases:
>100_bases AAACAACGTACCCTAATAATACAAATAAAACAATACAATTAATTAAAGATAATCATGGTAAATTAGAAACAATAGATTAT GTATAGGAGGTGGCAATAAT
Downstream 100 bases:
>100_bases TTTGAGCCTACCTAAGTATATAATTAATTTTGAAGAGCTTACAGAGGATTTAAAAAATCATTTATTAAGTCTGATAGATG ATAATATAAGAACTAATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MGLPSYVVNFDELSDLIKDYLQNGVKVDIGNINFSTKDMENLLSEIKDKIQGVDYNDLINALNALGVKLDNLSGNLGISG TQKIYGKMLEIPAVKGQHIIEFKGNGQITGITYSQSSWRFEDSWDLQVGNDKLFESVRTKEYGEHKFLNVFYPINGTVKF IYNNISGTSKVLWVDFNILENSNLPTPTIPTTSEKNYRFLAIGESEYTLQGANNLMGCTYDADNISNLFKEHKESAKFTK NIVAKNKTKSEALNLIKNTFQDAQDNDISYLFWSGHGTVYEDKFALVAKDNIITVYELQTILDDIKGTKVIFIDTCHSGL AIDKNFAYTLAVVEEKLRSIDKTLNKQGYKVLTASAGSETSGDLSAGYNGNPNPSGAFTWALTQSIKTKKSDKDKNRIVT LEELYQSVLHFYDEFNIKNPYLKITQTAQVYPRNDTSSIFEYKEGA
Sequences:
>Translated_446_residues MGLPSYVVNFDELSDLIKDYLQNGVKVDIGNINFSTKDMENLLSEIKDKIQGVDYNDLINALNALGVKLDNLSGNLGISG TQKIYGKMLEIPAVKGQHIIEFKGNGQITGITYSQSSWRFEDSWDLQVGNDKLFESVRTKEYGEHKFLNVFYPINGTVKF IYNNISGTSKVLWVDFNILENSNLPTPTIPTTSEKNYRFLAIGESEYTLQGANNLMGCTYDADNISNLFKEHKESAKFTK NIVAKNKTKSEALNLIKNTFQDAQDNDISYLFWSGHGTVYEDKFALVAKDNIITVYELQTILDDIKGTKVIFIDTCHSGL AIDKNFAYTLAVVEEKLRSIDKTLNKQGYKVLTASAGSETSGDLSAGYNGNPNPSGAFTWALTQSIKTKKSDKDKNRIVT LEELYQSVLHFYDEFNIKNPYLKITQTAQVYPRNDTSSIFEYKEGA >Mature_445_residues GLPSYVVNFDELSDLIKDYLQNGVKVDIGNINFSTKDMENLLSEIKDKIQGVDYNDLINALNALGVKLDNLSGNLGISGT QKIYGKMLEIPAVKGQHIIEFKGNGQITGITYSQSSWRFEDSWDLQVGNDKLFESVRTKEYGEHKFLNVFYPINGTVKFI YNNISGTSKVLWVDFNILENSNLPTPTIPTTSEKNYRFLAIGESEYTLQGANNLMGCTYDADNISNLFKEHKESAKFTKN IVAKNKTKSEALNLIKNTFQDAQDNDISYLFWSGHGTVYEDKFALVAKDNIITVYELQTILDDIKGTKVIFIDTCHSGLA IDKNFAYTLAVVEEKLRSIDKTLNKQGYKVLTASAGSETSGDLSAGYNGNPNPSGAFTWALTQSIKTKKSDKDKNRIVTL EELYQSVLHFYDEFNIKNPYLKITQTAQVYPRNDTSSIFEYKEGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50078; Mature: 49947
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLPSYVVNFDELSDLIKDYLQNGVKVDIGNINFSTKDMENLLSEIKDKIQGVDYNDLIN CCCCHHEECHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHH ALNALGVKLDNLSGNLGISGTQKIYGKMLEIPAVKGQHIIEFKGNGQITGITYSQSSWRF HHHHHCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEECCCCCCC EDSWDLQVGNDKLFESVRTKEYGEHKFLNVFYPINGTVKFIYNNISGTSKVLWVDFNILE CCCCCEEECCHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCCCCCEEEEEEEEEEE NSNLPTPTIPTTSEKNYRFLAIGESEYTLQGANNLMGCTYDADNISNLFKEHKESAKFTK CCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHH NIVAKNKTKSEALNLIKNTFQDAQDNDISYLFWSGHGTVYEDKFALVAKDNIITVYELQT HHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEECCEEEEEECCEEEEEEHHH ILDDIKGTKVIFIDTCHSGLAIDKNFAYTLAVVEEKLRSIDKTLNKQGYKVLTASAGSET HHHHCCCCEEEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC SGDLSAGYNGNPNPSGAFTWALTQSIKTKKSDKDKNRIVTLEELYQSVLHFYDEFNIKNP CCCCCCCCCCCCCCCCEEEEEEHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCC YLKITQTAQVYPRNDTSSIFEYKEGA EEEEEEEEEEEECCCCHHHHHCCCCC >Mature Secondary Structure GLPSYVVNFDELSDLIKDYLQNGVKVDIGNINFSTKDMENLLSEIKDKIQGVDYNDLIN CCCHHEECHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHH ALNALGVKLDNLSGNLGISGTQKIYGKMLEIPAVKGQHIIEFKGNGQITGITYSQSSWRF HHHHHCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEECCCCCCC EDSWDLQVGNDKLFESVRTKEYGEHKFLNVFYPINGTVKFIYNNISGTSKVLWVDFNILE CCCCCEEECCHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCCCCCEEEEEEEEEEE NSNLPTPTIPTTSEKNYRFLAIGESEYTLQGANNLMGCTYDADNISNLFKEHKESAKFTK CCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHH NIVAKNKTKSEALNLIKNTFQDAQDNDISYLFWSGHGTVYEDKFALVAKDNIITVYELQT HHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEECCEEEEEECCEEEEEEHHH ILDDIKGTKVIFIDTCHSGLAIDKNFAYTLAVVEEKLRSIDKTLNKQGYKVLTASAGSET HHHHCCCCEEEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC SGDLSAGYNGNPNPSGAFTWALTQSIKTKKSDKDKNRIVTLEELYQSVLHFYDEFNIKNP CCCCCCCCCCCCCCCCEEEEEEHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCC YLKITQTAQVYPRNDTSSIFEYKEGA EEEEEEEEEEEECCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA