| Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
|---|---|
| Accession | NC_009697 |
| Length | 3,863,450 |
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The map label for this gene is 153932256
Identifier: 153932256
GI number: 153932256
Start: 2462587
End: 2463087
Strand: Reverse
Name: 153932256
Synonym: CLB_2323
Alternate gene names: NA
Gene position: 2463087-2462587 (Counterclockwise)
Preceding gene: 153931165
Following gene: 153932885
Centisome position: 63.75
GC content: 29.74
Gene sequence:
>501_bases ATGAATTTAGATGTATCCGATTTAATAAAAAAAGTAGAACTAAGTAAAGAGGTTCATCTTAAGTTAGAAGATGATAAAAG ATTCTTTGACGGAGAAGAAGAAATTCTTTATTTAGAAGCGCCAACATTAGATGGGGTAGTTAGTATATCTGAAGATATAT TAACCTTAAATGGAAAGTTAAGTGCAGAGATTGAGCTTTCTTGTTCAAGATGTCTTCAAAAGTTTAAACACCATGTTGAC ACAGAGGTACATGAGAGTTTTACAAATAATCCCCAATGCGAAGATGATGAGATTATGTTACTAGAAGATGAAGTTATTGA TGTTACAGAGGTTATAGAAAATAACATAATTATAGAATTACCAATAAAAAGACTCTGTAAGGAAAATTGTAAAGGCTTAT GCCAACAATGCGGTGTTAATTTAAATTTTTCAAAATGTAAATGTGAAAAAGATATAGATCCAAGGTTGGCAAAACTAAAA GACTTTTTTTCTACTCAGTAA
Upstream 100 bases:
>100_bases AAATATAGATATAATAACTTTGATTTACTCATAAAATACTTGACTTTTTAATATGCCCTTTATATAATAAATTGTGGTTG CTATAATTGAGGTGAATTTT
Downstream 100 bases:
>100_bases GGAGGTGTTTACAGTGGGAAATCCAGCGAGAAAAACTTCAAAGGCAAAAAGAGATTCTAGAAAAGCTCAAACTTTCAAAT TAAGCTTACCAGGAATCGTT
Product: ribosomal protein L32 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MNLDVSDLIKKVELSKEVHLKLEDDKRFFDGEEEILYLEAPTLDGVVSISEDILTLNGKLSAEIELSCSRCLQKFKHHVD TEVHESFTNNPQCEDDEIMLLEDEVIDVTEVIENNIIIELPIKRLCKENCKGLCQQCGVNLNFSKCKCEKDIDPRLAKLK DFFSTQ
Sequences:
>Translated_166_residues MNLDVSDLIKKVELSKEVHLKLEDDKRFFDGEEEILYLEAPTLDGVVSISEDILTLNGKLSAEIELSCSRCLQKFKHHVD TEVHESFTNNPQCEDDEIMLLEDEVIDVTEVIENNIIIELPIKRLCKENCKGLCQQCGVNLNFSKCKCEKDIDPRLAKLK DFFSTQ >Mature_166_residues MNLDVSDLIKKVELSKEVHLKLEDDKRFFDGEEEILYLEAPTLDGVVSISEDILTLNGKLSAEIELSCSRCLQKFKHHVD TEVHESFTNNPQCEDDEIMLLEDEVIDVTEVIENNIIIELPIKRLCKENCKGLCQQCGVNLNFSKCKCEKDIDPRLAKLK DFFSTQ
Specific function: Unknown
COG id: COG1399
COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae ML1660 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003772 [H]
Pfam domain/function: PF02620 DUF177 [H]
EC number: NA
Molecular weight: Translated: 19034; Mature: 19034
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLDVSDLIKKVELSKEVHLKLEDDKRFFDGEEEILYLEAPTLDGVVSISEDILTLNGKL CCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCHHCCCCCEEEECCCE SAEIELSCSRCLQKFKHHVDTEVHESFTNNPQCEDDEIMLLEDEVIDVTEVIENNIIIEL EEEEEHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHCCCEEEE PIKRLCKENCKGLCQQCGVNLNFSKCKCEKDIDPRLAKLKDFFSTQ CHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MNLDVSDLIKKVELSKEVHLKLEDDKRFFDGEEEILYLEAPTLDGVVSISEDILTLNGKL CCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCHHCCCCCEEEECCCE SAEIELSCSRCLQKFKHHVDTEVHESFTNNPQCEDDEIMLLEDEVIDVTEVIENNIIIEL EEEEEHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHCCCEEEE PIKRLCKENCKGLCQQCGVNLNFSKCKCEKDIDPRLAKLKDFFSTQ CHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]