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The map label for this gene is fliC [H]

Identifier: 153932133

GI number: 153932133

Start: 2754947

End: 2755765

Strand: Reverse

Name: fliC [H]

Synonym: CLB_2636

Alternate gene names: 153932133

Gene position: 2755765-2754947 (Counterclockwise)

Preceding gene: 153930939

Following gene: 153933314

Centisome position: 71.33

GC content: 28.33

Gene sequence:

>819_bases
ATGCTTATAAATAATGCTAATGTTTTAGGATCTTTTAATAGAATTACTAAACAAAAGTTTAAAAATGAAAGTGTTGTAGA
AAAGGTTTCTTCTGGAAAAAGAATAAATAGGGCCTCAGATGATGCTTCAGGTATAACTATATCTGAAAGTTTTAAAGCGC
AAGTAAGGGGACTTTCACAAGCTGGAAGAAATACTCAAGATGGTATTTCTATGCTCCAGACTGTGGATGCTGCATTAGAT
GATATTTCAAAACATTTATATAGAATGAAAGAAATTGCGGTGAAAGCTGCTAATGATACATTAACAGATGAAGATAGAAA
GTTAGCACATGAAGAATTTAAAGAATTAAAAAATTCTATAGACGAAATTTCAGATAAGACAGAATTTAATAAAATAAAAC
TTTTAAAAGAAGATAAAGATCTAAATATACAAATTAAAGATAATCCATATGTAACTTATACAGTTAAGTTGCAAGCTGTA
AATACAGAAAGAATGGATATAAAAGATAGTACTGTGGATACTTTTCAGGATGCTTCTAAGACTATATCAAGTATAGATAA
AGCATTAAATGAATTAATAAAATATAGAGTTAATACTGGAAATGATTATAATAATTTATGCCAGGCCTTTAATGATTCAA
GTAACTCAGAATTAAATCTAACAGCATCTTTATCTAGAGTAGAGGATTCTGATATGGCTTCATCTATGATGAATTTAATA
AAGGGAAATGTGCTTTCAGAGTATAATAAATCTATGCTAGTAGCAGTAAGAGAAACTACTCAAGGGATAAATGCAATAAT
AAGTAAATCGCTTCTATAG

Upstream 100 bases:

>100_bases
AAACTTTGGGAATGTTGGGAAAAGAAACAAACACCAATAAAGATATAATATTATATTACGATAAATAATTATATTAGCTT
AATTAAAAGGGGGTGGATTT

Downstream 100 bases:

>100_bases
ATGATGAAAATATATACAAAACACAAAAATCCTATTAGTTAAAAAACAAACCTAAACAAAAAAGGGGAGAATATAAATGG
GTGAAAATAGGAGATTTCAA

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MLINNANVLGSFNRITKQKFKNESVVEKVSSGKRINRASDDASGITISESFKAQVRGLSQAGRNTQDGISMLQTVDAALD
DISKHLYRMKEIAVKAANDTLTDEDRKLAHEEFKELKNSIDEISDKTEFNKIKLLKEDKDLNIQIKDNPYVTYTVKLQAV
NTERMDIKDSTVDTFQDASKTISSIDKALNELIKYRVNTGNDYNNLCQAFNDSSNSELNLTASLSRVEDSDMASSMMNLI
KGNVLSEYNKSMLVAVRETTQGINAIISKSLL

Sequences:

>Translated_272_residues
MLINNANVLGSFNRITKQKFKNESVVEKVSSGKRINRASDDASGITISESFKAQVRGLSQAGRNTQDGISMLQTVDAALD
DISKHLYRMKEIAVKAANDTLTDEDRKLAHEEFKELKNSIDEISDKTEFNKIKLLKEDKDLNIQIKDNPYVTYTVKLQAV
NTERMDIKDSTVDTFQDASKTISSIDKALNELIKYRVNTGNDYNNLCQAFNDSSNSELNLTASLSRVEDSDMASSMMNLI
KGNVLSEYNKSMLVAVRETTQGINAIISKSLL
>Mature_272_residues
MLINNANVLGSFNRITKQKFKNESVVEKVSSGKRINRASDDASGITISESFKAQVRGLSQAGRNTQDGISMLQTVDAALD
DISKHLYRMKEIAVKAANDTLTDEDRKLAHEEFKELKNSIDEISDKTEFNKIKLLKEDKDLNIQIKDNPYVTYTVKLQAV
NTERMDIKDSTVDTFQDASKTISSIDKALNELIKYRVNTGNDYNNLCQAFNDSSNSELNLTASLSRVEDSDMASSMMNLI
KGNVLSEYNKSMLVAVRETTQGINAIISKSLL

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=155, Percent_Identity=35.4838709677419, Blast_Score=106, Evalue=1e-24,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 30365; Mature: 30365

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLINNANVLGSFNRITKQKFKNESVVEKVSSGKRINRASDDASGITISESFKAQVRGLSQ
CEECCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHH
AGRNTQDGISMLQTVDAALDDISKHLYRMKEIAVKAANDTLTDEDRKLAHEEFKELKNSI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
DEISDKTEFNKIKLLKEDKDLNIQIKDNPYVTYTVKLQAVNTERMDIKDSTVDTFQDASK
HHHHCCHHHHHHEEEECCCCCEEEECCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHH
TISSIDKALNELIKYRVNTGNDYNNLCQAFNDSSNSELNLTASLSRVEDSDMASSMMNLI
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEEHHHHCCHHHHHHHHHHHH
KGNVLSEYNKSMLVAVRETTQGINAIISKSLL
HHHHHHHHCHHHEEEEHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLINNANVLGSFNRITKQKFKNESVVEKVSSGKRINRASDDASGITISESFKAQVRGLSQ
CEECCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHH
AGRNTQDGISMLQTVDAALDDISKHLYRMKEIAVKAANDTLTDEDRKLAHEEFKELKNSI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
DEISDKTEFNKIKLLKEDKDLNIQIKDNPYVTYTVKLQAVNTERMDIKDSTVDTFQDASK
HHHHCCHHHHHHEEEECCCCCEEEECCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHH
TISSIDKALNELIKYRVNTGNDYNNLCQAFNDSSNSELNLTASLSRVEDSDMASSMMNLI
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEEHHHHCCHHHHHHHHHHHH
KGNVLSEYNKSMLVAVRETTQGINAIISKSLL
HHHHHHHHCHHHEEEEHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1479346; 11058132 [H]