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The map label for this gene is thiW

Identifier: 153932092

GI number: 153932092

Start: 2340671

End: 2341240

Strand: Reverse

Name: thiW

Synonym: CLB_2194

Alternate gene names: NA

Gene position: 2341240-2340671 (Counterclockwise)

Preceding gene: 153932983

Following gene: 153932879

Centisome position: 60.6

GC content: 34.04

Gene sequence:

>570_bases
ATGGAGAAAAACTCAAAACTATTAAAGAAACTTATGTTAGCAATGATTGTGGCAATGGGAATTGTAATTTCACCAATTCT
TCGTATTGAGGGAATGTGCCCTATGGCCCATTTTATTAACATTTTATGTTCTGTTATCCTTGGACCCTGGTATTCACTGC
TTTGTGCTACATTGATTGGTGTAATAAGAATGTTTTTTATGGGGATTCCACCTTTAGCTTTAACTGGAGCGGTTTTTGGG
GCATTTTTGTCTGGAGTTTCATACAGAGTATCTAAGGGAAAGTTAATTTGTGCTATTGTAGGTGAAGTTATAGGAACTGG
TGTTATAGGCGCCATACTTTCATATCCTATTATGACATTTATTTGGGGCAGAACAGGTCTTACATGGATATTTTATGTTC
CTTCATTTATTATGGCTGCGCTTATTGGAGGAACAATTGCATTTATTTTTCTAGGAGCATTAAGTAGGACAGGTAATCTT
ACAAAAATTCAAAGAAGTTTGGGGGCAAAAATTTATGATAAAGCAAGAATTAATAATAAACAAACTATTGCAAATAAGAC
AGAGTATTAA

Upstream 100 bases:

>100_bases
AAACTGCTATTTGGTTACACTAAAATCATACCTCAATAATGGTGTTTATTTCCTATATGACATATTGGGAAATTTAATGT
TATTAAGGAGGTATTTTATT

Downstream 100 bases:

>100_bases
ATTAAAAAAACCTCTCATTCACTATATTACAAATCCAATTTCAATAAATGATTGTGCAAATATAATTCTTGCTGCTGGCG
CAAAGCCCATTATGGCCGAG

Product: thiW protein

Products: NA

Alternate protein names: Hydroxyethylthiazole Permease; Thiazole Transporter ThiW; Integral Membrane Protein; Protein ThiW

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MEKNSKLLKKLMLAMIVAMGIVISPILRIEGMCPMAHFINILCSVILGPWYSLLCATLIGVIRMFFMGIPPLALTGAVFG
AFLSGVSYRVSKGKLICAIVGEVIGTGVIGAILSYPIMTFIWGRTGLTWIFYVPSFIMAALIGGTIAFIFLGALSRTGNL
TKIQRSLGAKIYDKARINNKQTIANKTEY

Sequences:

>Translated_189_residues
MEKNSKLLKKLMLAMIVAMGIVISPILRIEGMCPMAHFINILCSVILGPWYSLLCATLIGVIRMFFMGIPPLALTGAVFG
AFLSGVSYRVSKGKLICAIVGEVIGTGVIGAILSYPIMTFIWGRTGLTWIFYVPSFIMAALIGGTIAFIFLGALSRTGNL
TKIQRSLGAKIYDKARINNKQTIANKTEY
>Mature_189_residues
MEKNSKLLKKLMLAMIVAMGIVISPILRIEGMCPMAHFINILCSVILGPWYSLLCATLIGVIRMFFMGIPPLALTGAVFG
AFLSGVSYRVSKGKLICAIVGEVIGTGVIGAILSYPIMTFIWGRTGLTWIFYVPSFIMAALIGGTIAFIFLGALSRTGNL
TKIQRSLGAKIYDKARINNKQTIANKTEY

Specific function: Unknown

COG id: COG4732

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20515; Mature: 20515

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKNSKLLKKLMLAMIVAMGIVISPILRIEGMCPMAHFINILCSVILGPWYSLLCATLIG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VIRMFFMGIPPLALTGAVFGAFLSGVSYRVSKGKLICAIVGEVIGTGVIGAILSYPIMTF
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IWGRTGLTWIFYVPSFIMAALIGGTIAFIFLGALSRTGNLTKIQRSLGAKIYDKARINNK
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHCCCC
QTIANKTEY
HHHCCCCCC
>Mature Secondary Structure
MEKNSKLLKKLMLAMIVAMGIVISPILRIEGMCPMAHFINILCSVILGPWYSLLCATLIG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VIRMFFMGIPPLALTGAVFGAFLSGVSYRVSKGKLICAIVGEVIGTGVIGAILSYPIMTF
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IWGRTGLTWIFYVPSFIMAALIGGTIAFIFLGALSRTGNLTKIQRSLGAKIYDKARINNK
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHCCCC
QTIANKTEY
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA