Definition Clostridium botulinum A str. ATCC 19397, complete genome.
Accession NC_009697
Length 3,863,450

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The map label for this gene is 153931857

Identifier: 153931857

GI number: 153931857

Start: 2806216

End: 2806497

Strand: Reverse

Name: 153931857

Synonym: CLB_2683

Alternate gene names: NA

Gene position: 2806497-2806216 (Counterclockwise)

Preceding gene: 153932820

Following gene: 153933793

Centisome position: 72.64

GC content: 23.05

Gene sequence:

>282_bases
ATGAAGGTAAATGGAGTAGGTATAACAAATAGTATAAATGCTTACAATGCTAACAAAAAAGTAACTGAAAAGGAAGAAGT
AAAAAGCTTAAAAGACAAAATAGAAATATCTCATTTAGGTAAAAGTCTAACTACTTATTCTTTAGATGATAAATTTTTAG
ATGAAAAAGAGAGATTAGATAGAATAAATGAAATAAAAGACCAAATAGAAAAGGGTACTTATAAAATTGATTCAAAATTA
GTAGCAAAAAAGCTATTAAATAATATTAAGGAGAATTTTTAA

Upstream 100 bases:

>100_bases
AAAGGTATAAACCTTAATATAAGCTTTTCGATAATAGTATTACAACAGAACAAAACTACATTTAATTGTAGGTTAAAAAT
ATATTTGGGAGTGTATATAT

Downstream 100 bases:

>100_bases
TGGAAGAAAAAATAAAACAATCATTAAAAGAAGAAATAGAAGTATTAAAAGAACTTTTAAGCCTTCTAGATGATCAACAT
AAGTTTATTTCCTTTAAAAA

Product: regulator of flagellin synthesis FlgM

Products: NA

Alternate protein names: Flagellar Biosynthesis Anti-Sigma Factor FlgM; Regulator Of Flagellin Synthesis FlgM

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MKVNGVGITNSINAYNANKKVTEKEEVKSLKDKIEISHLGKSLTTYSLDDKFLDEKERLDRINEIKDQIEKGTYKIDSKL
VAKKLLNNIKENF

Sequences:

>Translated_93_residues
MKVNGVGITNSINAYNANKKVTEKEEVKSLKDKIEISHLGKSLTTYSLDDKFLDEKERLDRINEIKDQIEKGTYKIDSKL
VAKKLLNNIKENF
>Mature_93_residues
MKVNGVGITNSINAYNANKKVTEKEEVKSLKDKIEISHLGKSLTTYSLDDKFLDEKERLDRINEIKDQIEKGTYKIDSKL
VAKKLLNNIKENF

Specific function: Unknown

COG id: COG2747

COG function: function code KNU; Negative regulator of flagellin synthesis (anti-sigma28 factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10686; Mature: 10686

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVNGVGITNSINAYNANKKVTEKEEVKSLKDKIEISHLGKSLTTYSLDDKFLDEKERLD
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHH
RINEIKDQIEKGTYKIDSKLVAKKLLNNIKENF
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVNGVGITNSINAYNANKKVTEKEEVKSLKDKIEISHLGKSLTTYSLDDKFLDEKERLD
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHH
RINEIKDQIEKGTYKIDSKLVAKKLLNNIKENF
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA