| Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
|---|---|
| Accession | NC_009697 |
| Length | 3,863,450 |
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The map label for this gene is 153931705
Identifier: 153931705
GI number: 153931705
Start: 2792058
End: 2793761
Strand: Reverse
Name: 153931705
Synonym: CLB_2669
Alternate gene names: NA
Gene position: 2793761-2792058 (Counterclockwise)
Preceding gene: 153932475
Following gene: 153933983
Centisome position: 72.31
GC content: 21.83
Gene sequence:
>1704_bases ATGAGTACTATTACGGAGTGTATTACAGAAAAAAGTAAAGATAATAAAAATATATTTAGAATAAAAAAAGATAATAAATG GATATATATAGGGAGTAAGTACTCTGTTTCTAGAGATGTAGATAATTTTATAAATAAAACCTTGAAAATAATAAATGATG AACAGTTATTAGTTATTTTTGGTTTAGGAGCGGGAGAACATATAATAAAATTATTGTCTTATTTATCACAACAAAATAAA GTAATTATAATAGAACCTAATAATTCTGTTATAAACTCTTTTAGACAATTAGGATACTATAAAGAAATTATATTGGACAA AAGAATAGAAATAGCTAGATATGATAGTATAATTTTAGAAAATATTATTAGTAAATATATTAACAATATGATTAACATGG AATTTTTAATATATGCTAATTATGACAAAATATACAACAAAGAGATTTTAAAAACTATAGAAATTTTAAAAAAATATAAA AAAGATAAATCCTTAGAAAATAATACATTAATAAATTGTGGTAAAAATAATTGGATTAATTATGTTAATAATCTTAATAG TATAATAAACAGTATCCCTATAAATAATATAAAAGATTTATATAAAGGGAAATCAGCTATAATAGTGTCTGCAGGACCAT CTCTAGATAAGAATATATATTTATTAAAAGAATATAGGGAGAATTTTATAATAATATGTGGCTTAAGAACACTAAAACCA TTATTGGATATAGGCGTAAAACCAGATTTTATTTGTGTAATAGATTTTGGTGATAAAATATATGAGTTAGGACATCCTTT TTTAAATTTTAATATTCCATTAGTTTATCACATAGCTTCTAATTATAATTTTATAAGGGAATATAAAGGTCCTAAAATAT TTTTTAATACCTATAACATAGAAAAAAATTATTTAGATAATTTAATAAACAAAAAAGTAGATTCAATAATACAAGGTGGC TCAGTAGCTCATGTATGTATGGGACTAGCTATTTACTTAGGATGTAATAATATAATTTTTATAGGACAAGATCTAGCTTA TACAGGAGAAAGGCTTCACTCAAATAGTTCTACTCTTGAAACTGAAGGTGGAAATATAGGTATGTATGATGATAATATAT ATGTAGATGGTATAAATGGAAATAAGGTTAGGACAAGCTGTGAATTGGATGCTTATAGAAGATATATAGAATTTTATATT CATATGCTTAAAAATATTAACTTTATAAATAGTACTGAAGGTGGGGCAAACATAAAGGGTACAAAAGTAATGCCTTTAAA AGAATCCTTAAATAAATATGGTAAATTTGTCAGTAAAAAAAATATTGAACAATTATGTGAAAAATTTTATATAGATAAAA ACTATGCAATATTAAAAATTAATAACATTAAAGATTATATAGAAGAAGATATAAAAAATGCTGAAGAGTATTTTAAAAAT TTATCTAAAAATAGTATCGATTCTAAAAGTATAAAAATTTATATAGAAGCTATTTTAAGCCATAAATATTGGGATTTTAT TTATTGGATAATATACCCTGTAATATTAAAATCAAATAATAAACAATTTTATACTAAGTTTTCTATGAATAAGGACGAAA AAATAAATGTGATAAAAAATAAATATCATTTTCTTTTAAGTAGTATAGAAAATGAATTAGAAGGAGCATTAAATATATTA AATAAGCTTGAGGTGGAGGATTAA
Upstream 100 bases:
>100_bases AGCGGCAGAACAATATCCATATTTAGCAGATTTATTGGGAAATTATAGCAGAAAATTATTAAAAGAAGTTTTGTAAATTT TAAAATAGTTGTGGAAAGGA
Downstream 100 bases:
>100_bases AAGATGAATGAAAAAATAGAAGCGTTAAGAACTGCAAGTGAATATATATTAAATTTAAAAAATGGAATAAAAACAGCATC CGAAAATTTTCAAAATGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: TPR Repeat-Containing Protein; PseD Protein
Number of amino acids: Translated: 567; Mature: 566
Protein sequence:
>567_residues MSTITECITEKSKDNKNIFRIKKDNKWIYIGSKYSVSRDVDNFINKTLKIINDEQLLVIFGLGAGEHIIKLLSYLSQQNK VIIIEPNNSVINSFRQLGYYKEIILDKRIEIARYDSIILENIISKYINNMINMEFLIYANYDKIYNKEILKTIEILKKYK KDKSLENNTLINCGKNNWINYVNNLNSIINSIPINNIKDLYKGKSAIIVSAGPSLDKNIYLLKEYRENFIIICGLRTLKP LLDIGVKPDFICVIDFGDKIYELGHPFLNFNIPLVYHIASNYNFIREYKGPKIFFNTYNIEKNYLDNLINKKVDSIIQGG SVAHVCMGLAIYLGCNNIIFIGQDLAYTGERLHSNSSTLETEGGNIGMYDDNIYVDGINGNKVRTSCELDAYRRYIEFYI HMLKNINFINSTEGGANIKGTKVMPLKESLNKYGKFVSKKNIEQLCEKFYIDKNYAILKINNIKDYIEEDIKNAEEYFKN LSKNSIDSKSIKIYIEAILSHKYWDFIYWIIYPVILKSNNKQFYTKFSMNKDEKINVIKNKYHFLLSSIENELEGALNIL NKLEVED
Sequences:
>Translated_567_residues MSTITECITEKSKDNKNIFRIKKDNKWIYIGSKYSVSRDVDNFINKTLKIINDEQLLVIFGLGAGEHIIKLLSYLSQQNK VIIIEPNNSVINSFRQLGYYKEIILDKRIEIARYDSIILENIISKYINNMINMEFLIYANYDKIYNKEILKTIEILKKYK KDKSLENNTLINCGKNNWINYVNNLNSIINSIPINNIKDLYKGKSAIIVSAGPSLDKNIYLLKEYRENFIIICGLRTLKP LLDIGVKPDFICVIDFGDKIYELGHPFLNFNIPLVYHIASNYNFIREYKGPKIFFNTYNIEKNYLDNLINKKVDSIIQGG SVAHVCMGLAIYLGCNNIIFIGQDLAYTGERLHSNSSTLETEGGNIGMYDDNIYVDGINGNKVRTSCELDAYRRYIEFYI HMLKNINFINSTEGGANIKGTKVMPLKESLNKYGKFVSKKNIEQLCEKFYIDKNYAILKINNIKDYIEEDIKNAEEYFKN LSKNSIDSKSIKIYIEAILSHKYWDFIYWIIYPVILKSNNKQFYTKFSMNKDEKINVIKNKYHFLLSSIENELEGALNIL NKLEVED >Mature_566_residues STITECITEKSKDNKNIFRIKKDNKWIYIGSKYSVSRDVDNFINKTLKIINDEQLLVIFGLGAGEHIIKLLSYLSQQNKV IIIEPNNSVINSFRQLGYYKEIILDKRIEIARYDSIILENIISKYINNMINMEFLIYANYDKIYNKEILKTIEILKKYKK DKSLENNTLINCGKNNWINYVNNLNSIINSIPINNIKDLYKGKSAIIVSAGPSLDKNIYLLKEYRENFIIICGLRTLKPL LDIGVKPDFICVIDFGDKIYELGHPFLNFNIPLVYHIASNYNFIREYKGPKIFFNTYNIEKNYLDNLINKKVDSIIQGGS VAHVCMGLAIYLGCNNIIFIGQDLAYTGERLHSNSSTLETEGGNIGMYDDNIYVDGINGNKVRTSCELDAYRRYIEFYIH MLKNINFINSTEGGANIKGTKVMPLKESLNKYGKFVSKKNIEQLCEKFYIDKNYAILKINNIKDYIEEDIKNAEEYFKNL SKNSIDSKSIKIYIEAILSHKYWDFIYWIIYPVILKSNNKQFYTKFSMNKDEKINVIKNKYHFLLSSIENELEGALNILN KLEVED
Specific function: Unknown
COG id: COG2604
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65933; Mature: 65802
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTITECITEKSKDNKNIFRIKKDNKWIYIGSKYSVSRDVDNFINKTLKIINDEQLLVIF CCHHHHHHHHCCCCCCCEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEE GLGAGEHIIKLLSYLSQQNKVIIIEPNNSVINSFRQLGYYKEIILDKRIEIARYDSIILE ECCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH NIISKYINNMINMEFLIYANYDKIYNKEILKTIEILKKYKKDKSLENNTLINCGKNNWIN HHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHH YVNNLNSIINSIPINNIKDLYKGKSAIIVSAGPSLDKNIYLLKEYRENFIIICGLRTLKP HHHHHHHHHHHCCCCCHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCEEEEECHHHHHH LLDIGVKPDFICVIDFGDKIYELGHPFLNFNIPLVYHIASNYNFIREYKGPKIFFNTYNI HHHCCCCCCEEEEECCCCHHHHHCCCEEECCCCEEEEEECCCCCHHHCCCCEEEEEEECC EKNYLDNLINKKVDSIIQGGSVAHVCMGLAIYLGCNNIIFIGQDLAYTGERLHSNSSTLE CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEECCCHHHCCHHHCCCCCEEE TEGGNIGMYDDNIYVDGINGNKVRTSCELDAYRRYIEFYIHMLKNINFINSTEGGANIKG ECCCEEEEECCCEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCC TKVMPLKESLNKYGKFVSKKNIEQLCEKFYIDKNYAILKINNIKDYIEEDIKNAEEYFKN CEEECHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH LSKNSIDSKSIKIYIEAILSHKYWDFIYWIIYPVILKSNNKQFYTKFSMNKDEKINVIKN CCCCCCCCCHHEEHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHH KYHFLLSSIENELEGALNILNKLEVED HHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure STITECITEKSKDNKNIFRIKKDNKWIYIGSKYSVSRDVDNFINKTLKIINDEQLLVIF CHHHHHHHHCCCCCCCEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEE GLGAGEHIIKLLSYLSQQNKVIIIEPNNSVINSFRQLGYYKEIILDKRIEIARYDSIILE ECCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH NIISKYINNMINMEFLIYANYDKIYNKEILKTIEILKKYKKDKSLENNTLINCGKNNWIN HHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHH YVNNLNSIINSIPINNIKDLYKGKSAIIVSAGPSLDKNIYLLKEYRENFIIICGLRTLKP HHHHHHHHHHHCCCCCHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCEEEEECHHHHHH LLDIGVKPDFICVIDFGDKIYELGHPFLNFNIPLVYHIASNYNFIREYKGPKIFFNTYNI HHHCCCCCCEEEEECCCCHHHHHCCCEEECCCCEEEEEECCCCCHHHCCCCEEEEEEECC EKNYLDNLINKKVDSIIQGGSVAHVCMGLAIYLGCNNIIFIGQDLAYTGERLHSNSSTLE CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEECCCHHHCCHHHCCCCCEEE TEGGNIGMYDDNIYVDGINGNKVRTSCELDAYRRYIEFYIHMLKNINFINSTEGGANIKG ECCCEEEEECCCEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCC TKVMPLKESLNKYGKFVSKKNIEQLCEKFYIDKNYAILKINNIKDYIEEDIKNAEEYFKN CEEECHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH LSKNSIDSKSIKIYIEAILSHKYWDFIYWIIYPVILKSNNKQFYTKFSMNKDEKINVIKN CCCCCCCCCHHEEHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHH KYHFLLSSIENELEGALNILNKLEVED HHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA