Click here to switch to the map view.

The map label for this gene is safA [H]

Identifier: 153931529

GI number: 153931529

Start: 1806699

End: 1807334

Strand: Reverse

Name: safA [H]

Synonym: CLB_1705

Alternate gene names: 153931529

Gene position: 1807334-1806699 (Counterclockwise)

Preceding gene: 153932062

Following gene: 153932308

Centisome position: 46.78

GC content: 29.56

Gene sequence:

>636_bases
TTGAAGAAATCTTTATTAAAAAAAATTTTATTTTCAGTGTTGTTAACTAGTTTTTTATGCCTCTTCAAGGGGATTAGAGT
TTCTGCTGCTGATTATACTTCTTATATTGTAGTTCCCGGAGATAGTTTATGGAAGATTTCTGTAAAATATCAAATTGAAC
TAACGGAAATAATAGAAGCTAACCCTCAAATTAAAAATACTGATTTAATATATCCTGAAGAAAAAATAAATATACCAAAT
ATAGATACTATAAAAGCTTTAGAAAATGAAATTATAAGCCTCGTAAATCTTGAGAGGGAGAATGCCGGATTACCCCATTT
AAGAGCTAATTGGCAACTTTCTAAAGTAGCCAGATATAAATCTCAAGATATGGCTACTAAAGGCTATTTCTCTCATATTT
CATCAACTTATGGTTCTCCTCCTACCATGTTACAAAATTTTAATATAAGATCTATTACCACTGGAGAAAATATAGCTTAT
GGCCAAAGGATTCCTCAGCAAGTTATGACCAATTTAATGGATTCTATCGATGATAGACAAAACATATTAAGTAATGCTTA
TACTGAAATTGGTGTAGGCTTATATAAAAGTTTTTCTGGTGTATATTATTGGACTCAACTGTTTATTAAACCTTAA

Upstream 100 bases:

>100_bases
AATAAAAAATTTATTTCCATTTTTATTATAGGATATAAATATACATTTAAATTTAAACTATTATTGTATATTGTAGAAAA
ATTTAAGGTAGGTGTAATGA

Downstream 100 bases:

>100_bases
GCATTAAATAAAAATCTGTGAATAAACATACTTTACTCACAGATTTTTATTGTTAAAATGAAATTTATTTTTAGTACTTT
GTTACGTAATCATTTTATGT

Product: spore coat assembly protein SafA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MKKSLLKKILFSVLLTSFLCLFKGIRVSAADYTSYIVVPGDSLWKISVKYQIELTEIIEANPQIKNTDLIYPEEKINIPN
IDTIKALENEIISLVNLERENAGLPHLRANWQLSKVARYKSQDMATKGYFSHISSTYGSPPTMLQNFNIRSITTGENIAY
GQRIPQQVMTNLMDSIDDRQNILSNAYTEIGVGLYKSFSGVYYWTQLFIKP

Sequences:

>Translated_211_residues
MKKSLLKKILFSVLLTSFLCLFKGIRVSAADYTSYIVVPGDSLWKISVKYQIELTEIIEANPQIKNTDLIYPEEKINIPN
IDTIKALENEIISLVNLERENAGLPHLRANWQLSKVARYKSQDMATKGYFSHISSTYGSPPTMLQNFNIRSITTGENIAY
GQRIPQQVMTNLMDSIDDRQNILSNAYTEIGVGLYKSFSGVYYWTQLFIKP
>Mature_211_residues
MKKSLLKKILFSVLLTSFLCLFKGIRVSAADYTSYIVVPGDSLWKISVKYQIELTEIIEANPQIKNTDLIYPEEKINIPN
IDTIKALENEIISLVNLERENAGLPHLRANWQLSKVARYKSQDMATKGYFSHISSTYGSPPTMLQNFNIRSITTGENIAY
GQRIPQQVMTNLMDSIDDRQNILSNAYTEIGVGLYKSFSGVYYWTQLFIKP

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044
- InterPro:   IPR014258 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 24042; Mature: 24042

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLLKKILFSVLLTSFLCLFKGIRVSAADYTSYIVVPGDSLWKISVKYQIELTEIIEA
CCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEECCCCEEEEEEEEEEEEHHHHCC
NPQIKNTDLIYPEEKINIPNIDTIKALENEIISLVNLERENAGLPHLRANWQLSKVARYK
CCCCCCCCEECCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHH
SQDMATKGYFSHISSTYGSPPTMLQNFNIRSITTGENIAYGQRIPQQVMTNLMDSIDDRQ
HHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEECCCCCHHHHHCHHHHHHHHHHHHHHHH
NILSNAYTEIGVGLYKSFSGVYYWTQLFIKP
HHHHHHHHHHHHHHHHHHCCCEEEEEEEECC
>Mature Secondary Structure
MKKSLLKKILFSVLLTSFLCLFKGIRVSAADYTSYIVVPGDSLWKISVKYQIELTEIIEA
CCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEECCCCEEEEEEEEEEEEHHHHCC
NPQIKNTDLIYPEEKINIPNIDTIKALENEIISLVNLERENAGLPHLRANWQLSKVARYK
CCCCCCCCEECCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHH
SQDMATKGYFSHISSTYGSPPTMLQNFNIRSITTGENIAYGQRIPQQVMTNLMDSIDDRQ
HHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEECCCCCHHHHHCHHHHHHHHHHHHHHHH
NILSNAYTEIGVGLYKSFSGVYYWTQLFIKP
HHHHHHHHHHHHHHHHHHCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]