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The map label for this gene is yqaM [H]

Identifier: 153931292

GI number: 153931292

Start: 3134792

End: 3135403

Strand: Reverse

Name: yqaM [H]

Synonym: CLB_2989

Alternate gene names: 153931292

Gene position: 3135403-3134792 (Counterclockwise)

Preceding gene: 153933299

Following gene: 153934335

Centisome position: 81.16

GC content: 29.08

Gene sequence:

>612_bases
TTGCAAAGACTTTGGAAGAAGTATGGAATAGATCCAAAGGACATAAAAAAACTAAATGAGTACAAGCCTATTGATGATAT
ACAAATATCTGCAAGAGATAAGGCGGTAAAATATATAAAAAACTTTGAAAAAATAAAAAATACTAAAGAAAATGGATTCG
GACTATTTGGACAACCAGGGGCAGGTAAAACACATATCTTATTATCCATAGGTGCTGCACTGATAACAAAAGGTATAGAA
GTTATATATATGCCTTATGTCGAAGTAATGAGGGAGTTAAAAGCTACAGCAATGGATAATGAATATTATATAAAGTTATC
ATCTAGCTATATGAAAGCAAAAGTTTTAATTATTGATGATTTGTTTAAAGATAAATTAAAAAATGGAGAATTAGTTGGAG
AGCTAAGGGAAGCCGACATTAAACATCTTTATCCTATATTAAATTACAGGTATTTAAATAACTTACCAACTTTAGTGAGT
ACAGAATGTATCCCTGATATTTTGCAAAAATTAGATGATGCTCAATGTGGAAGAATGTTAGAAAAATGTGGAGATAATAT
AACTGTATTCCAAGGTTCTAAGTATAACTATAGGATGAAAAAATTTGTTTAG

Upstream 100 bases:

>100_bases
ATTAACTTCTAATATATGCCCTATATGCAATGGTACAGGATGGAAATTTAATAGTGAAACAGAAACATATATAAGATGTG
AATGCTATGAAAAAGAGAAG

Downstream 100 bases:

>100_bases
AGGGGGAGATAGGTAATCATGACAGATATAAAACTATTTGAAAGATGGGTTAAAAATGCTTTAACGAACACCTTTGTATT
TAATCCATATAAAGAATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MQRLWKKYGIDPKDIKKLNEYKPIDDIQISARDKAVKYIKNFEKIKNTKENGFGLFGQPGAGKTHILLSIGAALITKGIE
VIYMPYVEVMRELKATAMDNEYYIKLSSSYMKAKVLIIDDLFKDKLKNGELVGELREADIKHLYPILNYRYLNNLPTLVS
TECIPDILQKLDDAQCGRMLEKCGDNITVFQGSKYNYRMKKFV

Sequences:

>Translated_203_residues
MQRLWKKYGIDPKDIKKLNEYKPIDDIQISARDKAVKYIKNFEKIKNTKENGFGLFGQPGAGKTHILLSIGAALITKGIE
VIYMPYVEVMRELKATAMDNEYYIKLSSSYMKAKVLIIDDLFKDKLKNGELVGELREADIKHLYPILNYRYLNNLPTLVS
TECIPDILQKLDDAQCGRMLEKCGDNITVFQGSKYNYRMKKFV
>Mature_203_residues
MQRLWKKYGIDPKDIKKLNEYKPIDDIQISARDKAVKYIKNFEKIKNTKENGFGLFGQPGAGKTHILLSIGAALITKGIE
VIYMPYVEVMRELKATAMDNEYYIKLSSSYMKAKVLIIDDLFKDKLKNGELVGELREADIKHLYPILNYRYLNNLPTLVS
TECIPDILQKLDDAQCGRMLEKCGDNITVFQGSKYNYRMKKFV

Specific function: Unknown

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqxC and T.hyodysenteriae hemolysin tlyA [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013317 [H]

Pfam domain/function: PF00308 Bac_DnaA [H]

EC number: NA

Molecular weight: Translated: 23431; Mature: 23431

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRLWKKYGIDPKDIKKLNEYKPIDDIQISARDKAVKYIKNFEKIKNTKENGFGLFGQPG
CCHHHHHHCCCHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
AGKTHILLSIGAALITKGIEVIYMPYVEVMRELKATAMDNEYYIKLSSSYMKAKVLIIDD
CCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEHHHHH
LFKDKLKNGELVGELREADIKHLYPILNYRYLNNLPTLVSTECIPDILQKLDDAQCGRML
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHH
EKCGDNITVFQGSKYNYRMKKFV
HHHCCCEEEEECCCCCCHHHHCC
>Mature Secondary Structure
MQRLWKKYGIDPKDIKKLNEYKPIDDIQISARDKAVKYIKNFEKIKNTKENGFGLFGQPG
CCHHHHHHCCCHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
AGKTHILLSIGAALITKGIEVIYMPYVEVMRELKATAMDNEYYIKLSSSYMKAKVLIIDD
CCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEHHHHH
LFKDKLKNGELVGELREADIKHLYPILNYRYLNNLPTLVSTECIPDILQKLDDAQCGRML
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHH
EKCGDNITVFQGSKYNYRMKKFV
HHHCCCEEEEECCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]